Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is glvA

Identifier: 170754641

GI number: 170754641

Start: 367107

End: 368441

Strand: Direct

Name: glvA

Synonym: CLD_0461

Alternate gene names: 170754641

Gene position: 367107-368441 (Clockwise)

Preceding gene: 170754412

Following gene: 170756599

Centisome position: 9.27

GC content: 33.48

Gene sequence:

>1335_bases
ATGGAACAAAATAAAAAATTTTCAATTGTTATTGCAGGTGGAGGAAGTACATTTACACCAGGCATAGTAATGATGTTATT
AGATAATATTCATCGTTTCCCATTACGCAAATTAAAGTTATATGATAATGATGGAAAGCGTCAAGAAACAATAGGAAAAG
CTTTAGAAATACTATTAAAAGAGAATGCACCAGAAATAGAATTCACATATACAACTGACCCAAAGGAAGCATTTACTGAT
GTAGATTTTTGCATGGCTCATATTCGTGTTGGAAAATATGAAATGCGTGAGCAAGATGAAAAGATTCCTTTAAAACATGG
TGTTGTTGGACAAGAAACCTGTGGACCAGGTGGTATAGCATATGGAATGCGTTCTATCGGTGGAATGATGGAACTAATAG
ATATTATGGAAAAGTATTCTCCAAATTGTTGGATGTTAAATTATTCAAATCCAGCAGCTATAGTTGCAGAAGCATGCCGT
ATATTAAAGCCAAATTCTAAGGTGTTAAATATTTGTGATATGCCAGTTGGTACACTTCGTCGTATGTCTCAGATAGTAGG
TTTAACTCCCAAAGATTTAGAAGTTAACTACTTTGGGTTAAATCATTTTGGATGGTGGACAAGTGTTAGAGACAAACAAG
GAAATGACTTAATGCCAAAACTAAAGGCTTATGTAGCAGAAAACGGTTATTTAAACAAAGTAGAAGTAGATACACAGCAT
ACAGAACCAAGCTGGCAAGAAACTCATAAAAAAGCAAAGGATTTATTAGCTGTTGAACCTAATTTCTTACCAAACACATA
TTTAAAATATTATTTATATCCAGATTATGTTGTGGAGCATTCAGATGCTGAATATACAAGAGCTAATGAAGTAATGAATG
GAAGAGAAAAGTCTGTATTTAGTGCTGCAAAAGAAATAATTAAAGCTGGCACAGCAAAAGGTGGAGAATTCCATATAGAT
TCTCATGCTTCTTTCATTGTCGACTTAGCAAGAGCTATTGCTTATAACACTCATGAAAGAATGTTATGTATTGTAGAAAA
CAATGGAGCAATAGAAAACTTTGATCCAACAGCTATGGTAGAAGTACCTTGCATTGTAGGAAGTAATGGACCAGAGGCAT
TAGTTCAAGGAAAAATCCCTCAATTTGAAAAAGGATTAATGGAACAACAAGTATCAGTAGAAAAATTAGTTGTTGAATCA
TGGATAGAAGGAAGCTATCAAAAATTATGGCAAGCATTGACTCTTTCTAAGACAGTACCAAGTGCCAGTGTAGCAAAAGC
TATTTTAGATGATTTAATTGAGGCTAATAAAAATTATTGGCCAGAATTAAAGTAA

Upstream 100 bases:

>100_bases
TAATCAGCTTGTAAGAAATTAATAAAAATAATATAGAATTTATAAAAATAAATATTAAAAGTAAAAGTCCTATAAAATAT
AAAAAAAGGTGGTTAATTTT

Downstream 100 bases:

>100_bases
AGGAGATTAGATATGTTTCAGATATTTAAGAAAAAGAAATTATATTCTCCACTAAGTGGGAAAAGTGTAGCATTAAGTAA
TGTACAGGATGAAGTCTTTT

Product: maltose-6'-phosphate glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLKENAPEIEFTYTTDPKEAFTD
VDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIAYGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACR
ILKPNSKVLNICDMPVGTLRRMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH
TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVFSAAKEIIKAGTAKGGEFHID
SHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMVEVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVES
WIEGSYQKLWQALTLSKTVPSASVAKAILDDLIEANKNYWPELK

Sequences:

>Translated_444_residues
MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLKENAPEIEFTYTTDPKEAFTD
VDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIAYGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACR
ILKPNSKVLNICDMPVGTLRRMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH
TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVFSAAKEIIKAGTAKGGEFHID
SHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMVEVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVES
WIEGSYQKLWQALTLSKTVPSASVAKAILDDLIEANKNYWPELK
>Mature_444_residues
MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLKENAPEIEFTYTTDPKEAFTD
VDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIAYGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACR
ILKPNSKVLNICDMPVGTLRRMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH
TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVFSAAKEIIKAGTAKGGEFHID
SHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMVEVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVES
WIEGSYQKLWQALTLSKTVPSASVAKAILDDLIEANKNYWPELK

Specific function: Could Be Involved In The Arbutin Fermentation Pathway. Possible Pseudogene. [C]

COG id: COG1486

COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 4 family [H]

Homologues:

Organism=Escherichia coli, GI1788029, Length=454, Percent_Identity=26.8722466960352, Blast_Score=158, Evalue=8e-40,
Organism=Escherichia coli, GI1790560, Length=452, Percent_Identity=24.3362831858407, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019802
- InterPro:   IPR001088
- InterPro:   IPR022616
- InterPro:   IPR015955
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]

EC number: =3.2.1.122 [H]

Molecular weight: Translated: 49945; Mature: 49945

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
ENAPEIEFTYTTDPKEAFTDVDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIA
CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCCCCCCCCHHH
YGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACRILKPNSKVLNICDMPVGTLR
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHH
RMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH
HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVF
CCCCHHHHHHHHHHCEEECCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCHHHHHH
SAAKEIIKAGTAKGGEFHIDSHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMV
HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEE
EVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVESWIEGSYQKLWQALTLSKTVP
EEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
SASVAKAILDDLIEANKNYWPELK
CHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
ENAPEIEFTYTTDPKEAFTDVDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIA
CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCCCCCCCCHHH
YGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACRILKPNSKVLNICDMPVGTLR
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHH
RMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH
HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVF
CCCCHHHHHHHHHHCEEECCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCHHHHHH
SAAKEIIKAGTAKGGEFHIDSHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMV
HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEE
EVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVESWIEGSYQKLWQALTLSKTVP
EEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
SASVAKAILDDLIEANKNYWPELK
CHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA