| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is glvA
Identifier: 170754641
GI number: 170754641
Start: 367107
End: 368441
Strand: Direct
Name: glvA
Synonym: CLD_0461
Alternate gene names: 170754641
Gene position: 367107-368441 (Clockwise)
Preceding gene: 170754412
Following gene: 170756599
Centisome position: 9.27
GC content: 33.48
Gene sequence:
>1335_bases ATGGAACAAAATAAAAAATTTTCAATTGTTATTGCAGGTGGAGGAAGTACATTTACACCAGGCATAGTAATGATGTTATT AGATAATATTCATCGTTTCCCATTACGCAAATTAAAGTTATATGATAATGATGGAAAGCGTCAAGAAACAATAGGAAAAG CTTTAGAAATACTATTAAAAGAGAATGCACCAGAAATAGAATTCACATATACAACTGACCCAAAGGAAGCATTTACTGAT GTAGATTTTTGCATGGCTCATATTCGTGTTGGAAAATATGAAATGCGTGAGCAAGATGAAAAGATTCCTTTAAAACATGG TGTTGTTGGACAAGAAACCTGTGGACCAGGTGGTATAGCATATGGAATGCGTTCTATCGGTGGAATGATGGAACTAATAG ATATTATGGAAAAGTATTCTCCAAATTGTTGGATGTTAAATTATTCAAATCCAGCAGCTATAGTTGCAGAAGCATGCCGT ATATTAAAGCCAAATTCTAAGGTGTTAAATATTTGTGATATGCCAGTTGGTACACTTCGTCGTATGTCTCAGATAGTAGG TTTAACTCCCAAAGATTTAGAAGTTAACTACTTTGGGTTAAATCATTTTGGATGGTGGACAAGTGTTAGAGACAAACAAG GAAATGACTTAATGCCAAAACTAAAGGCTTATGTAGCAGAAAACGGTTATTTAAACAAAGTAGAAGTAGATACACAGCAT ACAGAACCAAGCTGGCAAGAAACTCATAAAAAAGCAAAGGATTTATTAGCTGTTGAACCTAATTTCTTACCAAACACATA TTTAAAATATTATTTATATCCAGATTATGTTGTGGAGCATTCAGATGCTGAATATACAAGAGCTAATGAAGTAATGAATG GAAGAGAAAAGTCTGTATTTAGTGCTGCAAAAGAAATAATTAAAGCTGGCACAGCAAAAGGTGGAGAATTCCATATAGAT TCTCATGCTTCTTTCATTGTCGACTTAGCAAGAGCTATTGCTTATAACACTCATGAAAGAATGTTATGTATTGTAGAAAA CAATGGAGCAATAGAAAACTTTGATCCAACAGCTATGGTAGAAGTACCTTGCATTGTAGGAAGTAATGGACCAGAGGCAT TAGTTCAAGGAAAAATCCCTCAATTTGAAAAAGGATTAATGGAACAACAAGTATCAGTAGAAAAATTAGTTGTTGAATCA TGGATAGAAGGAAGCTATCAAAAATTATGGCAAGCATTGACTCTTTCTAAGACAGTACCAAGTGCCAGTGTAGCAAAAGC TATTTTAGATGATTTAATTGAGGCTAATAAAAATTATTGGCCAGAATTAAAGTAA
Upstream 100 bases:
>100_bases TAATCAGCTTGTAAGAAATTAATAAAAATAATATAGAATTTATAAAAATAAATATTAAAAGTAAAAGTCCTATAAAATAT AAAAAAAGGTGGTTAATTTT
Downstream 100 bases:
>100_bases AGGAGATTAGATATGTTTCAGATATTTAAGAAAAAGAAATTATATTCTCCACTAAGTGGGAAAAGTGTAGCATTAAGTAA TGTACAGGATGAAGTCTTTT
Product: maltose-6'-phosphate glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLKENAPEIEFTYTTDPKEAFTD VDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIAYGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACR ILKPNSKVLNICDMPVGTLRRMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVFSAAKEIIKAGTAKGGEFHID SHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMVEVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVES WIEGSYQKLWQALTLSKTVPSASVAKAILDDLIEANKNYWPELK
Sequences:
>Translated_444_residues MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLKENAPEIEFTYTTDPKEAFTD VDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIAYGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACR ILKPNSKVLNICDMPVGTLRRMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVFSAAKEIIKAGTAKGGEFHID SHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMVEVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVES WIEGSYQKLWQALTLSKTVPSASVAKAILDDLIEANKNYWPELK >Mature_444_residues MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLKENAPEIEFTYTTDPKEAFTD VDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIAYGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACR ILKPNSKVLNICDMPVGTLRRMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVFSAAKEIIKAGTAKGGEFHID SHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMVEVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVES WIEGSYQKLWQALTLSKTVPSASVAKAILDDLIEANKNYWPELK
Specific function: Could Be Involved In The Arbutin Fermentation Pathway. Possible Pseudogene. [C]
COG id: COG1486
COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1788029, Length=454, Percent_Identity=26.8722466960352, Blast_Score=158, Evalue=8e-40, Organism=Escherichia coli, GI1790560, Length=452, Percent_Identity=24.3362831858407, Blast_Score=107, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019802 - InterPro: IPR001088 - InterPro: IPR022616 - InterPro: IPR015955 - InterPro: IPR016040 [H]
Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]
EC number: =3.2.1.122 [H]
Molecular weight: Translated: 49945; Mature: 49945
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLK CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH ENAPEIEFTYTTDPKEAFTDVDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIA CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCCCCCCCCHHH YGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACRILKPNSKVLNICDMPVGTLR HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHH RMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVF CCCCHHHHHHHHHHCEEECCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCHHHHHH SAAKEIIKAGTAKGGEFHIDSHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMV HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEE EVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVESWIEGSYQKLWQALTLSKTVP EEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC SASVAKAILDDLIEANKNYWPELK CHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDGKRQETIGKALEILLK CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH ENAPEIEFTYTTDPKEAFTDVDFCMAHIRVGKYEMREQDEKIPLKHGVVGQETCGPGGIA CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHCCCCCCCCCCCCHHH YGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACRILKPNSKVLNICDMPVGTLR HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHH RMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLKAYVAENGYLNKVEVDTQH HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC TEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHSDAEYTRANEVMNGREKSVF CCCCHHHHHHHHHHCEEECCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCHHHHHH SAAKEIIKAGTAKGGEFHIDSHASFIVDLARAIAYNTHERMLCIVENNGAIENFDPTAMV HHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEE EVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVESWIEGSYQKLWQALTLSKTVP EEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC SASVAKAILDDLIEANKNYWPELK CHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA