| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is glvA
Identifier: 170754623
GI number: 170754623
Start: 357055
End: 358380
Strand: Direct
Name: glvA
Synonym: CLD_0473
Alternate gene names: 170754623
Gene position: 357055-358380 (Clockwise)
Preceding gene: 170755416
Following gene: 170755203
Centisome position: 9.02
GC content: 32.13
Gene sequence:
>1326_bases ATGAAAAAATTTTCAGTAACAATAGCTGGTGGTGGAAGTACATTTACACCAGGAATAATATTAATGCTGTTAGATAACTT GGATAAATTTCCTATAAAAAAATTAAAGCTATACGATAATGATAAAGAAAGACAAGAAATAGTTGCTGGAGCTTGTAAGG TTATTTTAAAAGAGAAGGCACCAGATATTGAATTCTTAGCTACAGTAGATCCAGAGGAGGCCTTTACAGATATAGACTTT GTTATGGCTCATATAAGAGTAGGTAAATATGCAATGCGTGAATTAGATGAAAAAATTCCTTTAAAATATGATGTACTTGG ACAAGAAACTTGCGGTCCAGGAGGAATGGCTTATGGTATGAGATCTATTGGTGGAGTTATTGAAATACTTGATTATATGG AAAAATATTCACCAAATGCATGGATGTTAAATTACTCTAATCCAGCAGCAATAGTTGCAGAAGCTACTAGAAGATTAAGG CCTAATTCAAAGATACTAAACATATGTGATATGCCAATAGGTATAGAAGTACGTATGGCCGAAATTTTAGGATTAGAGTC AAGAAAGGATATGTCAGTTCGTTATTATGGACTTAATCATTTTGGATGGTGGACAGATATACGTGACAAAGAGGGAAATG ATTTAATGCCAAAAATAAAAGAACACGTTTCTAAGCATGGTTATGTAGTTGATAAGGGAGATAGCCAACATATTGAAGCA AGTTGGAATGATACCTTTGCTAAAGCAAAAGATGTATATGCTGTTGATCCAGATACATTACCTAATACTTATTTAAAATA TTATTTATTCCAAGATTATGTTGTTAAACATGCTGATAAAGAATATACAAGAGCAAATGAAGTAATGGATGGAAGAGAAA AGTTTGTATTTGGAGAATGTAGAAAAGTTATAGAAAAACAATCTACAGAAGGTTGTGAACTTCACATAGATGAACATGCT TCTTATATAGTTGACCTTGCAAGAGCTATAGCATACAATACAAAGGAAAGAATGTTGTTAATTGTAGAAAATAATGGTAT AATCGAAAACTTTGATCCTACAGCTATGGTTGAAGTACCATGTATTCTTGGAAGCAATGGACCAGAACCATTATCAGTAG GTAAGATTCCACAATTCCAAAAAGGATTAATGGAACAACAAGTTTCTGTAGAAAAATTAGTAGTTGAAGCTTGGATAGAA AAATCTTATCAAAAATTATGGCAAGCTATTACACTTTCTAAGACAGTACCTAGTGCATCCGTTGCTAAGAATATTTTAGA TGATTTAATTGAAGCAAATAAGGATTTTTGGCCTGAATTAAAGTAG
Upstream 100 bases:
>100_bases AGCAAACAAATGAAGTTAAGGATGTAGTCAAAACAACTTATGGTAAATAATTTATAATATGAAACTAAATACAAAATAAA ATTAGAAAGAAGGAATAATT
Downstream 100 bases:
>100_bases TATTTAAAGATAATTTAATAATATTATTTTAAAAAATAGAAAAATTATTGTAAAATTAGTTGAGACTGCCAAAAGTAGAT TAAAATCTATTTTAGACAGT
Product: maltose-6'-phosphate glucosidase
Products: NA
Alternate protein names: 6-phospho-alpha-glucosidase; 6-phospho-glucosidase; Maltose-6-phosphate hydrolase [H]
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MKKFSVTIAGGGSTFTPGIILMLLDNLDKFPIKKLKLYDNDKERQEIVAGACKVILKEKAPDIEFLATVDPEEAFTDIDF VMAHIRVGKYAMRELDEKIPLKYDVLGQETCGPGGMAYGMRSIGGVIEILDYMEKYSPNAWMLNYSNPAAIVAEATRRLR PNSKILNICDMPIGIEVRMAEILGLESRKDMSVRYYGLNHFGWWTDIRDKEGNDLMPKIKEHVSKHGYVVDKGDSQHIEA SWNDTFAKAKDVYAVDPDTLPNTYLKYYLFQDYVVKHADKEYTRANEVMDGREKFVFGECRKVIEKQSTEGCELHIDEHA SYIVDLARAIAYNTKERMLLIVENNGIIENFDPTAMVEVPCILGSNGPEPLSVGKIPQFQKGLMEQQVSVEKLVVEAWIE KSYQKLWQAITLSKTVPSASVAKNILDDLIEANKDFWPELK
Sequences:
>Translated_441_residues MKKFSVTIAGGGSTFTPGIILMLLDNLDKFPIKKLKLYDNDKERQEIVAGACKVILKEKAPDIEFLATVDPEEAFTDIDF VMAHIRVGKYAMRELDEKIPLKYDVLGQETCGPGGMAYGMRSIGGVIEILDYMEKYSPNAWMLNYSNPAAIVAEATRRLR PNSKILNICDMPIGIEVRMAEILGLESRKDMSVRYYGLNHFGWWTDIRDKEGNDLMPKIKEHVSKHGYVVDKGDSQHIEA SWNDTFAKAKDVYAVDPDTLPNTYLKYYLFQDYVVKHADKEYTRANEVMDGREKFVFGECRKVIEKQSTEGCELHIDEHA SYIVDLARAIAYNTKERMLLIVENNGIIENFDPTAMVEVPCILGSNGPEPLSVGKIPQFQKGLMEQQVSVEKLVVEAWIE KSYQKLWQAITLSKTVPSASVAKNILDDLIEANKDFWPELK >Mature_441_residues MKKFSVTIAGGGSTFTPGIILMLLDNLDKFPIKKLKLYDNDKERQEIVAGACKVILKEKAPDIEFLATVDPEEAFTDIDF VMAHIRVGKYAMRELDEKIPLKYDVLGQETCGPGGMAYGMRSIGGVIEILDYMEKYSPNAWMLNYSNPAAIVAEATRRLR PNSKILNICDMPIGIEVRMAEILGLESRKDMSVRYYGLNHFGWWTDIRDKEGNDLMPKIKEHVSKHGYVVDKGDSQHIEA SWNDTFAKAKDVYAVDPDTLPNTYLKYYLFQDYVVKHADKEYTRANEVMDGREKFVFGECRKVIEKQSTEGCELHIDEHA SYIVDLARAIAYNTKERMLLIVENNGIIENFDPTAMVEVPCILGSNGPEPLSVGKIPQFQKGLMEQQVSVEKLVVEAWIE KSYQKLWQAITLSKTVPSASVAKNILDDLIEANKDFWPELK
Specific function: Catalyzes the hydrolysis of O-alpha-linked disaccharide 6-phosphates, including maltose-6'P and all five phosphorylated isomers of sucrose, but not sucrose-6P. Does not hydrolyze beta- linked disaccharide 6-phosphates such as cellobiose-6'P and gentiobios
COG id: COG1486
COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1788029, Length=459, Percent_Identity=26.5795206971678, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1790560, Length=468, Percent_Identity=22.4358974358974, Blast_Score=101, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019802 - InterPro: IPR001088 - InterPro: IPR022616 - InterPro: IPR015955 - InterPro: IPR016040 [H]
Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]
EC number: =3.2.1.122 [H]
Molecular weight: Translated: 50015; Mature: 50015
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS01324 GLYCOSYL_HYDROL_F4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFSVTIAGGGSTFTPGIILMLLDNLDKFPIKKLKLYDNDKERQEIVAGACKVILKEKA CCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC PDIEFLATVDPEEAFTDIDFVMAHIRVGKYAMRELDEKIPLKYDVLGQETCGPGGMAYGM CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHH RSIGGVIEILDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPIGIEVRMA HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEHH EILGLESRKDMSVRYYGLNHFGWWTDIRDKEGNDLMPKIKEHVSKHGYVVDKGDSQHIEA HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEC SWNDTFAKAKDVYAVDPDTLPNTYLKYYLFQDYVVKHADKEYTRANEVMDGREKFVFGEC CCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH RKVIEKQSTEGCELHIDEHASYIVDLARAIAYNTKERMLLIVENNGIIENFDPTAMVEVP HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCEEEEEE CILGSNGPEPLSVGKIPQFQKGLMEQQVSVEKLVVEAWIEKSYQKLWQAITLSKTVPSAS EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VAKNILDDLIEANKDFWPELK HHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKFSVTIAGGGSTFTPGIILMLLDNLDKFPIKKLKLYDNDKERQEIVAGACKVILKEKA CCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC PDIEFLATVDPEEAFTDIDFVMAHIRVGKYAMRELDEKIPLKYDVLGQETCGPGGMAYGM CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHH RSIGGVIEILDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPIGIEVRMA HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEHH EILGLESRKDMSVRYYGLNHFGWWTDIRDKEGNDLMPKIKEHVSKHGYVVDKGDSQHIEA HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEC SWNDTFAKAKDVYAVDPDTLPNTYLKYYLFQDYVVKHADKEYTRANEVMDGREKFVFGEC CCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHH RKVIEKQSTEGCELHIDEHASYIVDLARAIAYNTKERMLLIVENNGIIENFDPTAMVEVP HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCEEEEEE CILGSNGPEPLSVGKIPQFQKGLMEQQVSVEKLVVEAWIEKSYQKLWQAITLSKTVPSAS EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VAKNILDDLIEANKDFWPELK HHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11781805; 11466286 [H]