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The map label for this gene is yobV [H]

Identifier: 170754423

GI number: 170754423

Start: 1723543

End: 1724487

Strand: Reverse

Name: yobV [H]

Synonym: CLD_3001

Alternate gene names: 170754423

Gene position: 1724487-1723543 (Counterclockwise)

Preceding gene: 170754668

Following gene: 170755228

Centisome position: 43.57

GC content: 24.34

Gene sequence:

>945_bases
ATGAAAATTAATAGATTATTGGCAATTGTTGTAATGCTTTTAAATAAAGAAAAAATATCTGCATCAGAATTAGCTGAAAA
ATTTGAGGTTTCTGTAAGAACAATTTATAGAGATATTGAAGCAATTAATCTTGCTGGAATTCCTATAGTTTCTCAAATTG
GAAATAATGGAGGATTTTATATTATAGATAACTATAAAATCAATCATCAACTTTTAACATTAGAAGATATGATTTCAATT
ATAGAAGCTCTAAAAAATATGAATAAATTTTTAGATAATAAAAATGTTGAAATGGCCATTGAAAAGGTAAAAAATATTGT
TCCTAAAGAAAAAAAAGAAGTATTTGATTTGCATTTTGAGCAAATGTGTATAGATACATTACCTTGGGGCTTTAAAAAAT
GTGAAGAAGAAAACTTAAAATACAAAATTATATATGATGCTGTAGATAACAAAAACTGTATAGCCTTTGATTATAGAAAC
TCAAAAGGTGAATATAATTGGAGACAGGTAGAACCATTAACTCTTGTTTTTAAAGGTTTTTCATGGTATTTATTTTCCTT
TTGCAAATTAAAAAATGATTACCGATTTTTCAAATTATCAAGAATGGAAAATTTAACTGTTCTACATGAAAAAATTAATG
AAAATAGAATTTCCTATAAAGAATATATAAATATTAGTGAGAGTGAACAAGTACCTACAAGAGTTGTATTAAAGTTTTCT
GAAAGAGTTAGATATAGAATAGACGATTGTTTTGATAAAGATGAAATAAAGTTTCAAGAAGATGGTAGTATAATTGTAGA
TACATATTTATTAGAAGATGACTGGATATATTCCATGATATTAAGTTACGGAGAATATGTGGAAGTACTTGAACCCAATC
ATATTAGAGAAATTATAAAGGATAAATGTAAAAAAATTAATGATATATATTCAAATATGACATAG

Upstream 100 bases:

>100_bases
TTATGCAATTCTCCCAACAATTTCTCTCTAGCCAATCTTACAAGTTATTAATTTGATATAATAAAATAGTCATTTCAAAT
TATGGGGGGTTTATAGATTC

Downstream 100 bases:

>100_bases
TGTTGTCAAAGCCTTCCTATATAATACAAATATAAGCATAAGGAAGGGGAATAAAATATGGAACAAAGATATTGTCAAAG
TTGTGGAATGCCAATGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKINRLLAIVVMLLNKEKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWRQVEPLTLVFKGFSWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSIIVDTYLLEDDWIYSMILSYGEYVEVLEPNHIREIIKDKCKKINDIYSNMT

Sequences:

>Translated_314_residues
MKINRLLAIVVMLLNKEKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWRQVEPLTLVFKGFSWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSIIVDTYLLEDDWIYSMILSYGEYVEVLEPNHIREIIKDKCKKINDIYSNMT
>Mature_314_residues
MKINRLLAIVVMLLNKEKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWRQVEPLTLVFKGFSWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSIIVDTYLLEDDWIYSMILSYGEYVEVLEPNHIREIIKDKCKKINDIYSNMT

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 37322; Mature: 37322

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINRLLAIVVMLLNKEKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFY
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCEE
IIDNYKINHQLLTLEDMISIIEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFE
EEECEEECCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
QMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRNSKGEYNWRQVEPLTLVFKGF
HHHHHHCCCCHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECCHHEEEHHHH
SWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHH
ERVRYRIDDCFDKDEIKFQEDGSIIVDTYLLEDDWIYSMILSYGEYVEVLEPNHIREIIK
HHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCHHHHHHHHHHCCCEECCCCHHHHHHHH
DKCKKINDIYSNMT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MKINRLLAIVVMLLNKEKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFY
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCEE
IIDNYKINHQLLTLEDMISIIEALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFE
EEECEEECCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
QMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRNSKGEYNWRQVEPLTLVFKGF
HHHHHHCCCCHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECCHHEEEHHHH
SWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHH
ERVRYRIDDCFDKDEIKFQEDGSIIVDTYLLEDDWIYSMILSYGEYVEVLEPNHIREIIK
HHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCHHHHHHHHHHCCCEECCCCHHHHHHHH
DKCKKINDIYSNMT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]