Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754354

Identifier: 170754354

GI number: 170754354

Start: 3665287

End: 3665913

Strand: Reverse

Name: 170754354

Synonym: CLD_1149

Alternate gene names: NA

Gene position: 3665913-3665287 (Counterclockwise)

Preceding gene: 170754850

Following gene: 170755161

Centisome position: 92.61

GC content: 37.8

Gene sequence:

>627_bases
ATGAAAGTAATAGCTATTAATGGTAGCCCGCGTAAAAACGGTAATACAAGTCAGGCACTCAAGATAATGGCAGATGAGTT
AGAGCAGCATAGTATAGAGGTTGAAATCATTCAAATTGGTCAACTAAATATTCATGGGTGCATTGGCTGTGGATACTGTT
GGACTTCCGAGGAAAATCATTGTGTTTTCAAAGACGACATTGTCAATGAGGTTGCAAAACAAATGAGAGAGGCAGACGGT
TTCATCCTTGCATCCCCAACATATTATGCAGGAATAGCAGGAACAATGAAGGCTTTTTTGGATAGAGTATTCTTCACAAG
TTCAGATTATTTTAAATATAAAGTTGCAACTTCCATTTCAGTTGTAAGGCGTGCTGGTGGTGTAGATGTAATACACCAGC
TTAATAACTATCTTAACTTAGCACAGACAGTCATGCCACCATCTCAATACTGGACAGTAGCATATGGTATGGAAAAAGGA
GAAGTTATTCAGGATGAAGAAGGGATTCAGACTATTCGTAAAAATGCTAGATCAATGGGCTGGCTACTTAAGACAATTGA
CGCTGGAAAAGAGAAAATACCTGTTCCTGTAGAAGAAGATCATGTTATGACTAATTTTATACGATAA

Upstream 100 bases:

>100_bases
AAAGAATTATGGATATAAAAATTTTTTTGTATATACTATTGACCTACAGTTAAGTGTAGGGTATATACTTGCCGTATAGT
AGAGAAAGGAGTGTGAATTT

Downstream 100 bases:

>100_bases
TAAATCAGAAAGGAAAATAATCTATGAAAGAAAATTTTTACTCATTAAGCAATAATTACAAGATTCCGAATATAGGATTC
GGTACATTCCGTACCCCTAG

Product: putative NADPH-dependent FMN reductase

Products: NA

Alternate protein names: Isf-2; MCJ-2; Mj2 [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKVIAINGSPRKNGNTSQALKIMADELEQHSIEVEIIQIGQLNIHGCIGCGYCWTSEENHCVFKDDIVNEVAKQMREADG
FILASPTYYAGIAGTMKAFLDRVFFTSSDYFKYKVATSISVVRRAGGVDVIHQLNNYLNLAQTVMPPSQYWTVAYGMEKG
EVIQDEEGIQTIRKNARSMGWLLKTIDAGKEKIPVPVEEDHVMTNFIR

Sequences:

>Translated_208_residues
MKVIAINGSPRKNGNTSQALKIMADELEQHSIEVEIIQIGQLNIHGCIGCGYCWTSEENHCVFKDDIVNEVAKQMREADG
FILASPTYYAGIAGTMKAFLDRVFFTSSDYFKYKVATSISVVRRAGGVDVIHQLNNYLNLAQTVMPPSQYWTVAYGMEKG
EVIQDEEGIQTIRKNARSMGWLLKTIDAGKEKIPVPVEEDHVMTNFIR
>Mature_208_residues
MKVIAINGSPRKNGNTSQALKIMADELEQHSIEVEIIQIGQLNIHGCIGCGYCWTSEENHCVFKDDIVNEVAKQMREADG
FILASPTYYAGIAGTMKAFLDRVFFTSSDYFKYKVATSISVVRRAGGVDVIHQLNNYLNLAQTVMPPSQYWTVAYGMEKG
EVIQDEEGIQTIRKNARSMGWLLKTIDAGKEKIPVPVEEDHVMTNFIR

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 23312; Mature: 23312

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIAINGSPRKNGNTSQALKIMADELEQHSIEVEIIQIGQLNIHGCIGCGYCWTSEENH
CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEECCEEECCCCCC
CVFKDDIVNEVAKQMREADGFILASPTYYAGIAGTMKAFLDRVFFTSSDYFKYKVATSIS
EEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
VVRRAGGVDVIHQLNNYLNLAQTVMPPSQYWTVAYGMEKGEVIQDEEGIQTIRKNARSMG
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHHHH
WLLKTIDAGKEKIPVPVEEDHVMTNFIR
HHHHHHHCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MKVIAINGSPRKNGNTSQALKIMADELEQHSIEVEIIQIGQLNIHGCIGCGYCWTSEENH
CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEECCEEECCCCCC
CVFKDDIVNEVAKQMREADGFILASPTYYAGIAGTMKAFLDRVFFTSSDYFKYKVATSIS
EEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH
VVRRAGGVDVIHQLNNYLNLAQTVMPPSQYWTVAYGMEKGEVIQDEEGIQTIRKNARSMG
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHHHH
WLLKTIDAGKEKIPVPVEEDHVMTNFIR
HHHHHHHCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]