| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is srlB [H]
Identifier: 170754273
GI number: 170754273
Start: 3726484
End: 3726849
Strand: Reverse
Name: srlB [H]
Synonym: CLD_1092
Alternate gene names: 170754273
Gene position: 3726849-3726484 (Counterclockwise)
Preceding gene: 170756010
Following gene: 170757457
Centisome position: 94.15
GC content: 27.87
Gene sequence:
>366_bases ATGAAAACAATATATAATACAGAGGTAAATAAATTAGGAATTATGGTAGAAGAATTTTATGGAGAAAAAATGATAATCTT ATTTAAAGATAATGCTCCAGAGGAATTAGCAGATTATTGTGTACTTCATGGGAAAAATGAATTAAATGATGAAATACAAG TAGGAGATATCTTTAAAATTGATGGAGAAGAATATAAAGTGACTGCTGTAGGAGATGAGGTTCATAAGAATTTACGTGAT TTAGGACATATTTGTGTAAGATTTGATGGAAGTACAAATGCGGAATTACCAGGAAGCTTATATTTAGAAGATAAAGAAAT AAAAGAAATAAAAGAAGGAACTGTAATAGAAGTTGAAAGACCTTAA
Upstream 100 bases:
>100_bases TAAATATACAATTGAATTTATATTATTTGCTTTATTATGTAATTAAAATAATATAAAAGGTTAAATTAATAAAAGTAGTT TAAAAATAGGAGGAAATATT
Downstream 100 bases:
>100_bases TTAAAAAAGGAGGGATACTGTGAATTTTAAAGAAAAAACTGTTATAATAACAGGAGGAGCTCAAAGTTTAGGAGAATATA TTGCTCATAGCTTTGCTGAA
Product: PTS system, glucitol/sorbitol-specific, IIA component
Products: Protein Histidine; Sugar Phosphate. [C]
Alternate protein names: EIIA-Gut; EIII-Gut; PTS system glucitol/sorbitol-specific EIIA component [H]
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKTIYNTEVNKLGIMVEEFYGEKMIILFKDNAPEELADYCVLHGKNELNDEIQVGDIFKIDGEEYKVTAVGDEVHKNLRD LGHICVRFDGSTNAELPGSLYLEDKEIKEIKEGTVIEVERP
Sequences:
>Translated_121_residues MKTIYNTEVNKLGIMVEEFYGEKMIILFKDNAPEELADYCVLHGKNELNDEIQVGDIFKIDGEEYKVTAVGDEVHKNLRD LGHICVRFDGSTNAELPGSLYLEDKEIKEIKEGTVIEVERP >Mature_121_residues MKTIYNTEVNKLGIMVEEFYGEKMIILFKDNAPEELADYCVLHGKNELNDEIQVGDIFKIDGEEYKVTAVGDEVHKNLRD LGHICVRFDGSTNAELPGSLYLEDKEIKEIKEGTVIEVERP
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3731
COG function: function code G; Phosphotransferase system sorbitol-specific component IIA
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI1789056, Length=119, Percent_Identity=35.2941176470588, Blast_Score=94, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004716 - InterPro: IPR018454 - ProDom: PD015842 [H]
Pfam domain/function: PF03829 PTSIIA_gutA [H]
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 13793; Mature: 13793
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS51097 PTS_EIIA_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIYNTEVNKLGIMVEEFYGEKMIILFKDNAPEELADYCVLHGKNELNDEIQVGDIFKI CCCCCCCCCHHHHEEEEHHCCCEEEEEECCCCCHHHHHHHEECCCCCCCCCEEECEEEEE DGEEYKVTAVGDEVHKNLRDLGHICVRFDGSTNAELPGSLYLEDKEIKEIKEGTVIEVER CCCEEEEEEECHHHHHHHHHHCEEEEEECCCCCCCCCCEEEECCHHHHHHCCCCEEEEEC P C >Mature Secondary Structure MKTIYNTEVNKLGIMVEEFYGEKMIILFKDNAPEELADYCVLHGKNELNDEIQVGDIFKI CCCCCCCCCHHHHEEEEHHCCCEEEEEECCCCCHHHHHHHEECCCCCCCCCEEECEEEEE DGEEYKVTAVGDEVHKNLRDLGHICVRFDGSTNAELPGSLYLEDKEIKEIKEGTVIEVER CCCEEEEEEECHHHHHHHHHHCEEEEEECCCCCCCCCCEEEECCHHHHHHCCCCEEEEEC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein N-Phosphohistidine; Sugar [C]
Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. [C]
General reaction: Transferases; Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3553176; 1630305; 9205837; 9278503 [H]