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The map label for this gene is bkdR [H]

Identifier: 170751982

GI number: 170751982

Start: 5946814

End: 5947302

Strand: Direct

Name: bkdR [H]

Synonym: Mrad2831_5614

Alternate gene names: 170751982

Gene position: 5946814-5947302 (Clockwise)

Preceding gene: 170751975

Following gene: 170751984

Centisome position: 97.84

GC content: 69.12

Gene sequence:

>489_bases
ATGCCCGCACGTCCGGCCGCCCTCGACGCCGCGAGCTTGCGCATCCTCGAATGCTTGCAGCAGGACAGCGAGATCAGCGT
CGCGGACCTCGCCGAACGGGTGGGTCTGTCGACGTCGCCGTGCTGGCGCCGCGTCAACGACCTGAAGGAGGCGGGCGTGA
TCCGCGGCTGCGTGGCGGTGGTCGACCCGCTCAGTCTCGGGCTCGCGGTCAACGTGTTCGTCCACGTGTCGCTGGAGAAG
CAGACCCAGGCCGCGCTCCAGGCGTTCGACGAGGCGGTGCGCGGCCGACCGGAGGTGATGGAGTGCTACCTGATGAGCGG
CGAGGCCGACTACATGCTCCGGGTCGTGGTCGAGGATCTCGGCCAGTACCAGAAGCTCGTCCTCGATCACCTCACGCGGA
TCCCCGGCGTGGCCAACATCCGCTCGAGCTTCGCGCTCGGGCAGGTGAAGTACACGACCGCCCTGCCGCTCGGGCACCTG
ACCCGCTGA

Upstream 100 bases:

>100_bases
GCGATGCCGGTTATAGGCGGCAAATCATGCCGCGCCGGTCATTGCTCCCGATCCGGCGCCCGTGGCTGCGCACAGCGGCC
GGAGACCGGAGATCGAACCC

Downstream 100 bases:

>100_bases
CGAGCGCGGCGACCGCCTGGGCTCCCGGTGTCGAATCTAGAGGACCGAAGGATCTCGGGGGCGGAGGCCCGAGAGGGCCG
CGTCGCGCGCGAGAGAAATG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MPARPAALDAASLRILECLQQDSEISVADLAERVGLSTSPCWRRVNDLKEAGVIRGCVAVVDPLSLGLAVNVFVHVSLEK
QTQAALQAFDEAVRGRPEVMECYLMSGEADYMLRVVVEDLGQYQKLVLDHLTRIPGVANIRSSFALGQVKYTTALPLGHL
TR

Sequences:

>Translated_162_residues
MPARPAALDAASLRILECLQQDSEISVADLAERVGLSTSPCWRRVNDLKEAGVIRGCVAVVDPLSLGLAVNVFVHVSLEK
QTQAALQAFDEAVRGRPEVMECYLMSGEADYMLRVVVEDLGQYQKLVLDHLTRIPGVANIRSSFALGQVKYTTALPLGHL
TR
>Mature_161_residues
PARPAALDAASLRILECLQQDSEISVADLAERVGLSTSPCWRRVNDLKEAGVIRGCVAVVDPLSLGLAVNVFVHVSLEKQ
TQAALQAFDEAVRGRPEVMECYLMSGEADYMLRVVVEDLGQYQKLVLDHLTRIPGVANIRSSFALGQVKYTTALPLGHLT
R

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=38, Blast_Score=121, Evalue=2e-29,
Organism=Escherichia coli, GI1787116, Length=154, Percent_Identity=37.6623376623377, Blast_Score=110, Evalue=3e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17675; Mature: 17543

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARPAALDAASLRILECLQQDSEISVADLAERVGLSTSPCWRRVNDLKEAGVIRGCVAV
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VDPLSLGLAVNVFVHVSLEKQTQAALQAFDEAVRGRPEVMECYLMSGEADYMLRVVVEDL
HHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH
GQYQKLVLDHLTRIPGVANIRSSFALGQVKYTTALPLGHLTR
HHHHHHHHHHHHHCCCHHHHHHHHHHCCEEHHHHCCCCCCCC
>Mature Secondary Structure 
PARPAALDAASLRILECLQQDSEISVADLAERVGLSTSPCWRRVNDLKEAGVIRGCVAV
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VDPLSLGLAVNVFVHVSLEKQTQAALQAFDEAVRGRPEVMECYLMSGEADYMLRVVVEDL
HHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH
GQYQKLVLDHLTRIPGVANIRSSFALGQVKYTTALPLGHLTR
HHHHHHHHHHHHHCCCHHHHHHHHHHCCEEHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]