| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751960
Identifier: 170751960
GI number: 170751960
Start: 5916506
End: 5918254
Strand: Direct
Name: 170751960
Synonym: Mrad2831_5592
Alternate gene names: NA
Gene position: 5916506-5918254 (Clockwise)
Preceding gene: 170751959
Following gene: 170751961
Centisome position: 97.35
GC content: 73.87
Gene sequence:
>1749_bases GTGGCTTGGGGGCCTGACCGCTGGCGCTTCTATCGGCTCGTCGCGCGCGAGGCCGCGCGCGCGGTGCGCGCCGCCGGCGC CAGCGTCACCGCCTCGCCCGACATCCTCGCCCGGATGCGGGTGGCCGGGCTCGTGATCGCGCCGCAGGACCTGCGCACCT CCGACGCGACCTTCGCGGACGACATCTATGCCGGATTGTTCGTCTTCGCCGGCCGGTCGCTCGCGGCGAGCGGCGGCTCG CCCTTCGATTACGCGGCGCCGTCACCGGAATGGGCCGACGAACTCTACGGCTTCGGCTGGCTGCGTCACCTGCGCGCCGC CGACACCGCGCTCGCCCGGGCCAATGCCCGCGCCTTCGTGGCCGATTTCATCGCCGGCCGCGGCGACGCGGTGCTCGCCC GGCAGACGCCGGTGGCGGCGCGCCGGCTGATCTCGTTCCTGTGCCAGTCGCCCCTCGTGCTGGAGGGCGCCGACCACGGC TTCTACCAGAACTTCCTGAAGGCGATCGGGCGCAACGCGCAGCAGCTCGAGCGTGACCTCCGGCGGGGCGTGCCGCCGCA ATGGCGCCTGAACGCCGCGGTGGCGCTCTGCTACGCCGGCCTGTGCTGCGACGGCATCCAGCCGATCCTGCGACGGGCGA CCCGGATCCTGACGCGGGAACTCGACCGGCAGATCCTGACCGATGGCGGCCACCGCTCCCGCGACCCGCGCTTCGCCATG GAGCTGCTCCTCGACCTGCTGCCCCTGCGCCAGAGTTATCTGAGCCGCAGCGTCGAGCCGCCGCTCTCGCTCCTGCGCGC GATCGACCGGATGCTGCCGCTGCTGCGTCTCCTGCGGCACCCGGACGCCTCGCTGAGCCACTTCAACGGCATGGGCGCCA CGGACGCGGACCATCTCGCGACCCTGCTGGTCTACGACGGCGCGCTCGCCCGCCCGCTGATGCACGCGCCGAATTCCGGC TACGAGCGCCTTGAGGGCGGCCGGGTCGTGATCGTGGCCGATGTCGGCGCCAGCCCGCCGCTGCCCTACTCGGTCAATGC CGGTGCCGGCTGCCTCGCCTTCGAGATGTCGAGCGGGCCGCAGCGCATCGTGGTCAATTGCGGCCTGCCGGCCAGCGGCG CGGATCTGCGCCTCCTGGCGCGCTCGACGCCGGCCCATTCCACGGCCGCGGTGGCCCACGCCTCGTCCTGCCGGTTCCTC ACCCGCACCGGCTGGTGGGGCGAGCGGCTCCTGGCCGACTGGCTGATCCGCCGGCGCGGCCCGGTGGTGCTGAGCGGTCC GTCCGCGGTGGCCGCCGAGCGCGCTGAGGAGACCGACAGCGTCGTCCTCGCGGCCCGGCACAACGGCTACGGCCCCGAAT TCGGCATCGTGCACGAGCGCCGCTGGCAGCTCTTCCACGCGACGGCCCGCCTGGAGGGCCGCGACGCCTTCCTGCGCCAG GGCAAGGGGCTCAGCCGCGGGCGGCGGCTGCGCCCGCAGGACGTGGCGATCCGCTTCCACCTCCATCCCGGGATCGCGGT GCGCAGCATCCCCGAGGGGCTGGAACTCGCCTCGGCGCTCGGGGAGATCTGGACGTTCCGCGCCGAGAACGCCGAGTTCG CCATCGAGGAGAGCGTCTACTTCTCGGGGCTGACCGGGCCGCGCCGGACCGACCAGATCGTCCTCCACCTGCGGGTCGCC GACGACGTCGAGGTCCGGTGGACCTTCGAGCGCCAGGCCTCCGCGCCCCTGCGCGGCGTGGCGCCCTGA
Upstream 100 bases:
>100_bases AGAGGCCCCCACTAGCCTTACGAAACGGGTGCCAGCCGATCCTCGTACGCGAGGGCTCAAGGCCTTGGGGCCTTGTCAGA ACGCGTAGCTCGGAGATCGC
Downstream 100 bases:
>100_bases CAGGTTCGCGACGGGGGCGGCTGGCCGGGGTCACCGTTTCCATGCTACCGCGCCGGAAAATCTCGAACTTTCGGCACGAA GCTATGGCGCACGATCAGGT
Product: heparinase II/III family protein
Products: NA
Alternate protein names: Heparinase II/III-Like; Heparinase II/III-Like Protein; Heparinase II/III-Like Family Protein; Cytoplasmic Protein; Heparinase II/Iii Family Protein
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MAWGPDRWRFYRLVAREAARAVRAAGASVTASPDILARMRVAGLVIAPQDLRTSDATFADDIYAGLFVFAGRSLAASGGS PFDYAAPSPEWADELYGFGWLRHLRAADTALARANARAFVADFIAGRGDAVLARQTPVAARRLISFLCQSPLVLEGADHG FYQNFLKAIGRNAQQLERDLRRGVPPQWRLNAAVALCYAGLCCDGIQPILRRATRILTRELDRQILTDGGHRSRDPRFAM ELLLDLLPLRQSYLSRSVEPPLSLLRAIDRMLPLLRLLRHPDASLSHFNGMGATDADHLATLLVYDGALARPLMHAPNSG YERLEGGRVVIVADVGASPPLPYSVNAGAGCLAFEMSSGPQRIVVNCGLPASGADLRLLARSTPAHSTAAVAHASSCRFL TRTGWWGERLLADWLIRRRGPVVLSGPSAVAAERAEETDSVVLAARHNGYGPEFGIVHERRWQLFHATARLEGRDAFLRQ GKGLSRGRRLRPQDVAIRFHLHPGIAVRSIPEGLELASALGEIWTFRAENAEFAIEESVYFSGLTGPRRTDQIVLHLRVA DDVEVRWTFERQASAPLRGVAP
Sequences:
>Translated_582_residues MAWGPDRWRFYRLVAREAARAVRAAGASVTASPDILARMRVAGLVIAPQDLRTSDATFADDIYAGLFVFAGRSLAASGGS PFDYAAPSPEWADELYGFGWLRHLRAADTALARANARAFVADFIAGRGDAVLARQTPVAARRLISFLCQSPLVLEGADHG FYQNFLKAIGRNAQQLERDLRRGVPPQWRLNAAVALCYAGLCCDGIQPILRRATRILTRELDRQILTDGGHRSRDPRFAM ELLLDLLPLRQSYLSRSVEPPLSLLRAIDRMLPLLRLLRHPDASLSHFNGMGATDADHLATLLVYDGALARPLMHAPNSG YERLEGGRVVIVADVGASPPLPYSVNAGAGCLAFEMSSGPQRIVVNCGLPASGADLRLLARSTPAHSTAAVAHASSCRFL TRTGWWGERLLADWLIRRRGPVVLSGPSAVAAERAEETDSVVLAARHNGYGPEFGIVHERRWQLFHATARLEGRDAFLRQ GKGLSRGRRLRPQDVAIRFHLHPGIAVRSIPEGLELASALGEIWTFRAENAEFAIEESVYFSGLTGPRRTDQIVLHLRVA DDVEVRWTFERQASAPLRGVAP >Mature_581_residues AWGPDRWRFYRLVAREAARAVRAAGASVTASPDILARMRVAGLVIAPQDLRTSDATFADDIYAGLFVFAGRSLAASGGSP FDYAAPSPEWADELYGFGWLRHLRAADTALARANARAFVADFIAGRGDAVLARQTPVAARRLISFLCQSPLVLEGADHGF YQNFLKAIGRNAQQLERDLRRGVPPQWRLNAAVALCYAGLCCDGIQPILRRATRILTRELDRQILTDGGHRSRDPRFAME LLLDLLPLRQSYLSRSVEPPLSLLRAIDRMLPLLRLLRHPDASLSHFNGMGATDADHLATLLVYDGALARPLMHAPNSGY ERLEGGRVVIVADVGASPPLPYSVNAGAGCLAFEMSSGPQRIVVNCGLPASGADLRLLARSTPAHSTAAVAHASSCRFLT RTGWWGERLLADWLIRRRGPVVLSGPSAVAAERAEETDSVVLAARHNGYGPEFGIVHERRWQLFHATARLEGRDAFLRQG KGLSRGRRLRPQDVAIRFHLHPGIAVRSIPEGLELASALGEIWTFRAENAEFAIEESVYFSGLTGPRRTDQIVLHLRVAD DVEVRWTFERQASAPLRGVAP
Specific function: Unknown
COG id: COG5360
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63746; Mature: 63614
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWGPDRWRFYRLVAREAARAVRAAGASVTASPDILARMRVAGLVIAPQDLRTSDATFAD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCEEECCCCCCCCCCCHHH DIYAGLFVFAGRSLAASGGSPFDYAAPSPEWADELYGFGWLRHLRAADTALARANARAFV HHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH ADFIAGRGDAVLARQTPVAARRLISFLCQSPLVLEGADHGFYQNFLKAIGRNAQQLERDL HHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHH RRGVPPQWRLNAAVALCYAGLCCDGIQPILRRATRILTRELDRQILTDGGHRSRDPRFAM HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ELLLDLLPLRQSYLSRSVEPPLSLLRAIDRMLPLLRLLRHPDASLSHFNGMGATDADHLA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHH TLLVYDGALARPLMHAPNSGYERLEGGRVVIVADVGASPPLPYSVNAGAGCLAFEMSSGP HHHHHCCHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCCEECCCCCCEEEEEECCCC QRIVVNCGLPASGADLRLLARSTPAHSTAAVAHASSCRFLTRTGWWGERLLADWLIRRRG CEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCC PVVLSGPSAVAAERAEETDSVVLAARHNGYGPEFGIVHERRWQLFHATARLEGRDAFLRQ CEEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHC GKGLSRGRRLRPQDVAIRFHLHPGIAVRSIPEGLELASALGEIWTFRAENAEFAIEESVY CCCCCCCCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHEEECCCCCEEEECCEE FSGLTGPRRTDQIVLHLRVADDVEVRWTFERQASAPLRGVAP EECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure AWGPDRWRFYRLVAREAARAVRAAGASVTASPDILARMRVAGLVIAPQDLRTSDATFAD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCEEECCCCCCCCCCCHHH DIYAGLFVFAGRSLAASGGSPFDYAAPSPEWADELYGFGWLRHLRAADTALARANARAFV HHHHHHHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH ADFIAGRGDAVLARQTPVAARRLISFLCQSPLVLEGADHGFYQNFLKAIGRNAQQLERDL HHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHH RRGVPPQWRLNAAVALCYAGLCCDGIQPILRRATRILTRELDRQILTDGGHRSRDPRFAM HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ELLLDLLPLRQSYLSRSVEPPLSLLRAIDRMLPLLRLLRHPDASLSHFNGMGATDADHLA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHH TLLVYDGALARPLMHAPNSGYERLEGGRVVIVADVGASPPLPYSVNAGAGCLAFEMSSGP HHHHHCCHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCCEECCCCCCEEEEEECCCC QRIVVNCGLPASGADLRLLARSTPAHSTAAVAHASSCRFLTRTGWWGERLLADWLIRRRG CEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCC PVVLSGPSAVAAERAEETDSVVLAARHNGYGPEFGIVHERRWQLFHATARLEGRDAFLRQ CEEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHC GKGLSRGRRLRPQDVAIRFHLHPGIAVRSIPEGLELASALGEIWTFRAENAEFAIEESVY CCCCCCCCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHEEECCCCCEEEECCEE FSGLTGPRRTDQIVLHLRVADDVEVRWTFERQASAPLRGVAP EECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA