| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is frc [H]
Identifier: 170751950
GI number: 170751950
Start: 5902952
End: 5904202
Strand: Direct
Name: frc [H]
Synonym: Mrad2831_5582
Alternate gene names: 170751950
Gene position: 5902952-5904202 (Clockwise)
Preceding gene: 170751949
Following gene: 170751951
Centisome position: 97.12
GC content: 66.67
Gene sequence:
>1251_bases ATGAGCAAGCCGCTGGAAGGCATCAAGATCATCGACTTCACGCACGTCCAGGCCGGCCCGGCCTGCACGCAGCTGCTCGC CTGGTTCGGCGCCGACGTGATCAAGGTCGAGCGTCCCGGCGCCGGCGACGTGACCCGCACCCAGCTGCGCCACGTCGAGG ACGCGGACGCGCTCTACTTCACGATGCTGAACTCCAACAAGCGCTCGCTCACCCTCGACACCAAGACGCAGGCGGGCAAG GAAGTCCTCGAGAAGCTCATCCAAGACTCCGACGTCATGGTCGAGAATTTCGGCCCCGGCGCCCTCGACCGGATGGGCTT CTCCTGGGCCCGCATCCAGGAGCTGAACCCGGGCATGATCCTCGCCTCGGTGAAGGGCTTCTCGGACGGTCACCACTACG AGGACCTGAAGGTCTACGAGAACGTCGCCCAGTGCGCGGGCGGTGCCGCCTCGACCACGGGCTTCTGGGACGGGCCGCCC ACCGTCAGCGCCGCCGCGCTCGGCGACTCCAACACCGGCATGCACCTCGCCATCGGCATCCTCACGGCGCTCCACCAGAA GAACAAGACCGGCAAGGGCCAGAAGGTCGCCGTGTCGATGCAGGACTCGGTGATCAACCTCTGCCGCGTGAAGCTGCGCG ATCAGCAGCGCCTCGACGCCCTCGGCTACCTCGAGGAGTACCCGCAGTACCCCCACGGCGAGTTCTCCGACGTGGTGCCG CGCGGCGGCAACGCGGGCGGCGGCGGACAGCCGGGCTGGGTGCTGAAGTGCAAGGGCTGGGAGACCGACCCGAACGCCTA CATCTACTTCACCATCCAGGGCCACGCCTGGGCGCCGATCTGCAAGGCGCTCGGCAAGGAGGAGTGGATCACCGATCCGG GCTACAACACCCCGCGGGCCCGCCAGGACAAGATCTTCGACATCTTCAAGACGATCGAGGAGTGGCTCGCCGACAAGACC AAGTTCGAGGCGGTCGACATCCTGCGCACCTACGACATCCCCTGCGCGCCGGTGCTGTCGATGAAGGAGATCGCCGAGGA CAAGTCCCTGCGCGAGAGCGGCACCGTCGTCGAGGTGGCGCACCCGAAGCTCGGCAAGTACCTGACCGTCGGAAGCCCGA TCAAGTTCTCCGACATGAAAGTCGAGGTGAAGGCGTCGCCACTGCTGGGCGAGCACACCGATGAGGTGCTCGCAGACCTG GGTTACACGCCGGAGCAGATCCGGGCGATGCACGAGGCCCGCGCGGTCTGA
Upstream 100 bases:
>100_bases GCCGAACTCGAAGCTTCCTCGGATGCGAACCGCCGGGCACCTTGATCCCGCCGGACGTGCCGAAGGTCCCGATCACCAAA CCGCACAGGGAGAACGCCCA
Downstream 100 bases:
>100_bases TAGAGACCGCCCGACCTCAGCGTTCCTGAGACAGGACGGCGCTCCCCCGGCGCCGTCCTTTTCATGTGCGAGCCCCGGAT CCGATGCGCGCATTCCTCAG
Product: formyl-coenzyme A transferase
Products: NA
Alternate protein names: Formyl-CoA transferase [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSKPLEGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGAGDVTRTQLRHVEDADALYFTMLNSNKRSLTLDTKTQAGK EVLEKLIQDSDVMVENFGPGALDRMGFSWARIQELNPGMILASVKGFSDGHHYEDLKVYENVAQCAGGAASTTGFWDGPP TVSAAALGDSNTGMHLAIGILTALHQKNKTGKGQKVAVSMQDSVINLCRVKLRDQQRLDALGYLEEYPQYPHGEFSDVVP RGGNAGGGGQPGWVLKCKGWETDPNAYIYFTIQGHAWAPICKALGKEEWITDPGYNTPRARQDKIFDIFKTIEEWLADKT KFEAVDILRTYDIPCAPVLSMKEIAEDKSLRESGTVVEVAHPKLGKYLTVGSPIKFSDMKVEVKASPLLGEHTDEVLADL GYTPEQIRAMHEARAV
Sequences:
>Translated_416_residues MSKPLEGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGAGDVTRTQLRHVEDADALYFTMLNSNKRSLTLDTKTQAGK EVLEKLIQDSDVMVENFGPGALDRMGFSWARIQELNPGMILASVKGFSDGHHYEDLKVYENVAQCAGGAASTTGFWDGPP TVSAAALGDSNTGMHLAIGILTALHQKNKTGKGQKVAVSMQDSVINLCRVKLRDQQRLDALGYLEEYPQYPHGEFSDVVP RGGNAGGGGQPGWVLKCKGWETDPNAYIYFTIQGHAWAPICKALGKEEWITDPGYNTPRARQDKIFDIFKTIEEWLADKT KFEAVDILRTYDIPCAPVLSMKEIAEDKSLRESGTVVEVAHPKLGKYLTVGSPIKFSDMKVEVKASPLLGEHTDEVLADL GYTPEQIRAMHEARAV >Mature_415_residues SKPLEGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGAGDVTRTQLRHVEDADALYFTMLNSNKRSLTLDTKTQAGKE VLEKLIQDSDVMVENFGPGALDRMGFSWARIQELNPGMILASVKGFSDGHHYEDLKVYENVAQCAGGAASTTGFWDGPPT VSAAALGDSNTGMHLAIGILTALHQKNKTGKGQKVAVSMQDSVINLCRVKLRDQQRLDALGYLEEYPQYPHGEFSDVVPR GGNAGGGGQPGWVLKCKGWETDPNAYIYFTIQGHAWAPICKALGKEEWITDPGYNTPRARQDKIFDIFKTIEEWLADKTK FEAVDILRTYDIPCAPVLSMKEIAEDKSLRESGTVVEVAHPKLGKYLTVGSPIKFSDMKVEVKASPLLGEHTDEVLADLG YTPEQIRAMHEARAV
Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]
COG id: COG1804
COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]
Homologues:
Organism=Homo sapiens, GI300863128, Length=400, Percent_Identity=30.75, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI300863124, Length=426, Percent_Identity=29.5774647887324, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI266456254, Length=420, Percent_Identity=26.1904761904762, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI42794625, Length=420, Percent_Identity=26.1904761904762, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI13376042, Length=426, Percent_Identity=26.2910798122066, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI300863126, Length=152, Percent_Identity=40.1315789473684, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI266458397, Length=214, Percent_Identity=30.3738317757009, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI266458393, Length=214, Percent_Identity=30.3738317757009, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI266458395, Length=155, Percent_Identity=32.258064516129, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI42822893, Length=155, Percent_Identity=32.258064516129, Blast_Score=79, Evalue=6e-15, Organism=Escherichia coli, GI1788717, Length=416, Percent_Identity=68.9903846153846, Blast_Score=572, Evalue=1e-164, Organism=Escherichia coli, GI87082093, Length=376, Percent_Identity=30.5851063829787, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1786222, Length=424, Percent_Identity=23.5849056603774, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI32564160, Length=210, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24648431, Length=411, Percent_Identity=31.6301703163017, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24585488, Length=198, Percent_Identity=27.7777777777778, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003673 - InterPro: IPR017659 [H]
Pfam domain/function: PF02515 CoA_transf_3 [H]
EC number: =2.8.3.16 [H]
Molecular weight: Translated: 45649; Mature: 45518
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPLEGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGAGDVTRTQLRHVEDADALYF CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEEEE TMLNSNKRSLTLDTKTQAGKEVLEKLIQDSDVMVENFGPGALDRMGFSWARIQELNPGMI EEECCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCHHHHHHCCCCEE LASVKGFSDGHHYEDLKVYENVAQCAGGAASTTGFWDGPPTVSAAALGDSNTGMHLAIGI EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH LTALHQKNKTGKGQKVAVSMQDSVINLCRVKLRDQQRLDALGYLEEYPQYPHGEFSDVVP HHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC RGGNAGGGGQPGWVLKCKGWETDPNAYIYFTIQGHAWAPICKALGKEEWITDPGYNTPRA CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCC RQDKIFDIFKTIEEWLADKTKFEAVDILRTYDIPCAPVLSMKEIAEDKSLRESGTVVEVA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEC HPKLGKYLTVGSPIKFSDMKVEVKASPLLGEHTDEVLADLGYTPEQIRAMHEARAV CCCCCCEEECCCCEEECCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure SKPLEGIKIIDFTHVQAGPACTQLLAWFGADVIKVERPGAGDVTRTQLRHVEDADALYF CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEEEE TMLNSNKRSLTLDTKTQAGKEVLEKLIQDSDVMVENFGPGALDRMGFSWARIQELNPGMI EEECCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCHHHHHHCCCCEE LASVKGFSDGHHYEDLKVYENVAQCAGGAASTTGFWDGPPTVSAAALGDSNTGMHLAIGI EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH LTALHQKNKTGKGQKVAVSMQDSVINLCRVKLRDQQRLDALGYLEEYPQYPHGEFSDVVP HHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC RGGNAGGGGQPGWVLKCKGWETDPNAYIYFTIQGHAWAPICKALGKEEWITDPGYNTPRA CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCC RQDKIFDIFKTIEEWLADKTKFEAVDILRTYDIPCAPVLSMKEIAEDKSLRESGTVVEVA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEC HPKLGKYLTVGSPIKFSDMKVEVKASPLLGEHTDEVLADLGYTPEQIRAMHEARAV CCCCCCEEECCCCEEECCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA