Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is slyX [H]

Identifier: 170751900

GI number: 170751900

Start: 5850709

End: 5850915

Strand: Direct

Name: slyX [H]

Synonym: Mrad2831_5532

Alternate gene names: 170751900

Gene position: 5850709-5850915 (Clockwise)

Preceding gene: 170751898

Following gene: 170751903

Centisome position: 96.26

GC content: 71.98

Gene sequence:

>207_bases
ATGGACGAGGCCACACGGATCGATCGTCTGGAGATGCGCCTCACCGAGCAGGACGCGACGATCGAGGATCTGAACCGGAC
CGTGACCGAGCAGTGGCGCGTGATCGACCGGCTCGTCCGGCAGCTGGACCTGCTGCGGGAGCAGGTGGAGGAGGCGGCTG
CCCGGGCGGCGCCGCGGGGGCCGGAGCCGCCGCCGCCGCACTACTGA

Upstream 100 bases:

>100_bases
CGGTTGCCCGGCTCGCGGCCTGCGCTAGGAGGGGGCCGAGAGCCGGCGGCACGACGCGATCGAGGCCGATTCGCGGCACG
GCACTGACGGGAGACCCGAC

Downstream 100 bases:

>100_bases
GGGGAGGGGCCGGTGCGCCGCGGCGCACCGGCCGAGACGTCAGAAGTTCGCCTGCGTGACGAACTTGGTGACCAGGTAGG
CGTCGAGGGCCTCCGGGCCG

Product: SlyX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MDEATRIDRLEMRLTEQDATIEDLNRTVTEQWRVIDRLVRQLDLLREQVEEAAARAAPRGPEPPPPHY

Sequences:

>Translated_68_residues
MDEATRIDRLEMRLTEQDATIEDLNRTVTEQWRVIDRLVRQLDLLREQVEEAAARAAPRGPEPPPPHY
>Mature_68_residues
MDEATRIDRLEMRLTEQDATIEDLNRTVTEQWRVIDRLVRQLDLLREQVEEAAARAAPRGPEPPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007236 [H]

Pfam domain/function: PF04102 SlyX [H]

EC number: NA

Molecular weight: Translated: 7979; Mature: 7979

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEATRIDRLEMRLTEQDATIEDLNRTVTEQWRVIDRLVRQLDLLREQVEEAAARAAPRG
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PEPPPPHY
CCCCCCCC
>Mature Secondary Structure
MDEATRIDRLEMRLTEQDATIEDLNRTVTEQWRVIDRLVRQLDLLREQVEEAAARAAPRG
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PEPPPPHY
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA