| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yjjL [H]
Identifier: 170751840
GI number: 170751840
Start: 5785655
End: 5786968
Strand: Direct
Name: yjjL [H]
Synonym: Mrad2831_5472
Alternate gene names: 170751840
Gene position: 5785655-5786968 (Clockwise)
Preceding gene: 170751838
Following gene: 170751845
Centisome position: 95.19
GC content: 70.78
Gene sequence:
>1314_bases ATGGCCCTGGCCGCAACGCCGCGCGTGCGCCGCATCCAGACGATCTCGCTCGCCCTGCTCGTCACGGCGGGCGTCGTCAA CTACGTCGACCGGGCCACCCTGGCGGTGGCCAACCCGCTGATCCGCGAGGATCTCGGCCTCTCGATCCCCGACATGGGAT TGCTGCTCTCGGCCTTCCTCTGGGCATACGCCTTCGCGCAGCTCCCGGCCGGGGCGCTCGCCGACCGGCTCGGCCCGCGC CTGACGCTGACGCTCGGCCTGACCTGCTGGTCGTTCGGCCAGATGCTCGGCGGCGCGGTGACGTCGTTCTGGCAGTTCGT GAGCGCGCGGATCGTGCTCGGTGTCGGCGAGGCGCCGCATTTTCCGACCTGCGCCCGGGTCTCCCGGGACTGGTTCAACA TCCGCCAGCGCGGCACCGCCACGGGAATCTGGAACTGCGCCTCCTCACTCGGGACCTTCCTGGCCCTGCCGCTGCTCACC TTCCTCATGGTGAGCTTCGGCTGGCGGGCGATGTTCGTCATCATGGGCGCGGCCGGCCTCGTGCTCGCCGCGATCGTCTA CCTGGTCTTCCGCAACCCGCGCGAGACCGACCTGACGCCGGGGGAGCGCGCCTTCCTGGAAGAGGGCGACGCCCCGAACG CGAGCCGCGCGGTCACCTGGAGCGCGTGGCGACGGCTCTTCGGGTTCCGCACCAGCTGGGGGATGATCGTCGGCTATTTC GGCTGCATCTACATGACGTGGCTCTACACCGCGTGGCTGCCGAGCTACCTCGAGATCGAGCGACACTTCACCCTGCAGAA GACCGGCCTCGTCGGCTCGATCCCCTTCGCCTTCGGCGTGCTGGGCGGGATCCTGGGCGGCCGCGTCGTCGATGTCCTCG TCCGCCGCGGCGTCGACCCGATCCGCAGCCGCAAGATCCCGATGGTCGGCTCCCTGGTGGCGACTGCCGCCTTCACGGTG GTGGCGGCGCTGACGCCGAGCGACACCCTCGCCATCGCCTGCATCTCGGCCTCGCTGTTCCTGGTCTACATGAGCTCGTC GTCGGCCTGGGCGATGGCCTCCGTGGCGGCGCCGGCGAGCTGCACGGCGTCGCTCGGCGCCATGCAGAATTTCGGCGGCT ACATCGGCGGCGCCCTGGCGCCGACCGTGACGGGCTTCATCGTCGGCGGCACGGGCCACTTCTCCATGGCCTTCATCACC GGGGCCGCGATCGCCCTGGTGGCGGCCCTGGGCTACTGGACGCTGATCCAGGATCCCATCGCCGACGAGGGACCGGAGAG CCCGATCGTCGGCGCGCTCGGGGCCGCGCGCTAG
Upstream 100 bases:
>100_bases CGGCGGCATTCGGTGCAGAATGGTCCCGGGCCGCCGCGAGTCGCGAAGGACCGGCCGGCCACGGAGACCCCCAAGGGGCC CGTCATACCGGGAGGACACG
Downstream 100 bases:
>100_bases GCGGGCCGACCGCGCTTCCTTGGCGTCAGCCCCTCGCGTCACCCCCGCAGGTTCGGCGCGGCGAGGATCAGGTCGCGGAG GTGCGTGCGGGCCGTGAAGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MALAATPRVRRIQTISLALLVTAGVVNYVDRATLAVANPLIREDLGLSIPDMGLLLSAFLWAYAFAQLPAGALADRLGPR LTLTLGLTCWSFGQMLGGAVTSFWQFVSARIVLGVGEAPHFPTCARVSRDWFNIRQRGTATGIWNCASSLGTFLALPLLT FLMVSFGWRAMFVIMGAAGLVLAAIVYLVFRNPRETDLTPGERAFLEEGDAPNASRAVTWSAWRRLFGFRTSWGMIVGYF GCIYMTWLYTAWLPSYLEIERHFTLQKTGLVGSIPFAFGVLGGILGGRVVDVLVRRGVDPIRSRKIPMVGSLVATAAFTV VAALTPSDTLAIACISASLFLVYMSSSSAWAMASVAAPASCTASLGAMQNFGGYIGGALAPTVTGFIVGGTGHFSMAFIT GAAIALVAALGYWTLIQDPIADEGPESPIVGALGAAR
Sequences:
>Translated_437_residues MALAATPRVRRIQTISLALLVTAGVVNYVDRATLAVANPLIREDLGLSIPDMGLLLSAFLWAYAFAQLPAGALADRLGPR LTLTLGLTCWSFGQMLGGAVTSFWQFVSARIVLGVGEAPHFPTCARVSRDWFNIRQRGTATGIWNCASSLGTFLALPLLT FLMVSFGWRAMFVIMGAAGLVLAAIVYLVFRNPRETDLTPGERAFLEEGDAPNASRAVTWSAWRRLFGFRTSWGMIVGYF GCIYMTWLYTAWLPSYLEIERHFTLQKTGLVGSIPFAFGVLGGILGGRVVDVLVRRGVDPIRSRKIPMVGSLVATAAFTV VAALTPSDTLAIACISASLFLVYMSSSSAWAMASVAAPASCTASLGAMQNFGGYIGGALAPTVTGFIVGGTGHFSMAFIT GAAIALVAALGYWTLIQDPIADEGPESPIVGALGAAR >Mature_436_residues ALAATPRVRRIQTISLALLVTAGVVNYVDRATLAVANPLIREDLGLSIPDMGLLLSAFLWAYAFAQLPAGALADRLGPRL TLTLGLTCWSFGQMLGGAVTSFWQFVSARIVLGVGEAPHFPTCARVSRDWFNIRQRGTATGIWNCASSLGTFLALPLLTF LMVSFGWRAMFVIMGAAGLVLAAIVYLVFRNPRETDLTPGERAFLEEGDAPNASRAVTWSAWRRLFGFRTSWGMIVGYFG CIYMTWLYTAWLPSYLEIERHFTLQKTGLVGSIPFAFGVLGGILGGRVVDVLVRRGVDPIRSRKIPMVGSLVATAAFTVV AALTPSDTLAIACISASLFLVYMSSSSAWAMASVAAPASCTASLGAMQNFGGYIGGALAPTVTGFIVGGTGHFSMAFITG AAIALVAALGYWTLIQDPIADEGPESPIVGALGAAR
Specific function: Responsible for the transport of L-galactonate from the periplasm across the inner membrane (Probable). Is essential for growth on L-galactonate as the sole carbon source [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI154350196, Length=396, Percent_Identity=23.4848484848485, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI9966811, Length=396, Percent_Identity=24.7474747474747, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI9945322, Length=390, Percent_Identity=23.8461538461538, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI6912666, Length=378, Percent_Identity=23.015873015873, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI21322234, Length=395, Percent_Identity=23.7974683544304, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI4885441, Length=389, Percent_Identity=22.3650385604113, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI148743791, Length=331, Percent_Identity=22.3564954682779, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI256219598, Length=379, Percent_Identity=24.2744063324538, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI4503847, Length=379, Percent_Identity=24.2744063324538, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI256219483, Length=379, Percent_Identity=24.2744063324538, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI256219543, Length=196, Percent_Identity=27.5510204081633, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI2367379, Length=415, Percent_Identity=42.8915662650602, Blast_Score=349, Evalue=2e-97, Organism=Escherichia coli, GI87082320, Length=426, Percent_Identity=31.924882629108, Blast_Score=212, Evalue=3e-56, Organism=Escherichia coli, GI1789515, Length=431, Percent_Identity=32.2505800464037, Blast_Score=194, Evalue=7e-51, Organism=Escherichia coli, GI1789152, Length=425, Percent_Identity=30.8235294117647, Blast_Score=188, Evalue=6e-49, Organism=Escherichia coli, GI2367193, Length=429, Percent_Identity=24.7086247086247, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1788573, Length=428, Percent_Identity=25.2336448598131, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87082310, Length=164, Percent_Identity=28.0487804878049, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71997452, Length=307, Percent_Identity=25.0814332247557, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25141316, Length=403, Percent_Identity=23.3250620347395, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI25141318, Length=372, Percent_Identity=22.5806451612903, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17535049, Length=421, Percent_Identity=23.2779097387173, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533556, Length=296, Percent_Identity=23.6486486486486, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115533554, Length=296, Percent_Identity=23.6486486486486, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI86561091, Length=362, Percent_Identity=23.2044198895028, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25141341, Length=336, Percent_Identity=23.2142857142857, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17561094, Length=273, Percent_Identity=26.7399267399267, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17554962, Length=301, Percent_Identity=23.5880398671096, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17552542, Length=281, Percent_Identity=23.8434163701068, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193208223, Length=249, Percent_Identity=23.6947791164659, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17563054, Length=222, Percent_Identity=22.972972972973, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17554148, Length=283, Percent_Identity=21.9081272084806, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24648416, Length=437, Percent_Identity=24.7139588100687, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI21356189, Length=437, Percent_Identity=24.7139588100687, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24583789, Length=390, Percent_Identity=24.3589743589744, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24584153, Length=399, Percent_Identity=24.5614035087719, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI19920686, Length=408, Percent_Identity=22.7941176470588, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI28573299, Length=316, Percent_Identity=25.9493670886076, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI20130167, Length=444, Percent_Identity=23.1981981981982, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI20130135, Length=291, Percent_Identity=26.8041237113402, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24655271, Length=291, Percent_Identity=26.8041237113402, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24653727, Length=423, Percent_Identity=22.2222222222222, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24656866, Length=160, Percent_Identity=30, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550478, Length=160, Percent_Identity=30, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573708, Length=265, Percent_Identity=23.7735849056604, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI28573707, Length=265, Percent_Identity=23.7735849056604, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24656861, Length=160, Percent_Identity=30, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI45550460, Length=316, Percent_Identity=25.3164556962025, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24641682, Length=407, Percent_Identity=21.6216216216216, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46369; Mature: 46238
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAATPRVRRIQTISLALLVTAGVVNYVDRATLAVANPLIREDLGLSIPDMGLLLSAFL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH WAYAFAQLPAGALADRLGPRLTLTLGLTCWSFGQMLGGAVTSFWQFVSARIVLGVGEAPH HHHHHHHCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC FPTCARVSRDWFNIRQRGTATGIWNCASSLGTFLALPLLTFLMVSFGWRAMFVIMGAAGL CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAAIVYLVFRNPRETDLTPGERAFLEEGDAPNASRAVTWSAWRRLFGFRTSWGMIVGYF HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHH GCIYMTWLYTAWLPSYLEIERHFTLQKTGLVGSIPFAFGVLGGILGGRVVDVLVRRGVDP HHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH IRSRKIPMVGSLVATAAFTVVAALTPSDTLAIACISASLFLVYMSSSSAWAMASVAAPAS HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCH CTASLGAMQNFGGYIGGALAPTVTGFIVGGTGHFSMAFITGAAIALVAALGYWTLIQDPI HHHHHHHHHHCCHHHCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ADEGPESPIVGALGAAR CCCCCCCCCCCCCCCCC >Mature Secondary Structure ALAATPRVRRIQTISLALLVTAGVVNYVDRATLAVANPLIREDLGLSIPDMGLLLSAFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH WAYAFAQLPAGALADRLGPRLTLTLGLTCWSFGQMLGGAVTSFWQFVSARIVLGVGEAPH HHHHHHHCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC FPTCARVSRDWFNIRQRGTATGIWNCASSLGTFLALPLLTFLMVSFGWRAMFVIMGAAGL CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAAIVYLVFRNPRETDLTPGERAFLEEGDAPNASRAVTWSAWRRLFGFRTSWGMIVGYF HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHH GCIYMTWLYTAWLPSYLEIERHFTLQKTGLVGSIPFAFGVLGGILGGRVVDVLVRRGVDP HHHHHHHHHHHHCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH IRSRKIPMVGSLVATAAFTVVAALTPSDTLAIACISASLFLVYMSSSSAWAMASVAAPAS HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCHHHHHHCCCCH CTASLGAMQNFGGYIGGALAPTVTGFIVGGTGHFSMAFITGAAIALVAALGYWTLIQDPI HHHHHHHHHHCCHHHCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ADEGPESPIVGALGAAR CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]