| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is rcp1 [H]
Identifier: 170751604
GI number: 170751604
Start: 5544018
End: 5544443
Strand: Direct
Name: rcp1 [H]
Synonym: Mrad2831_5225
Alternate gene names: 170751604
Gene position: 5544018-5544443 (Clockwise)
Preceding gene: 170751603
Following gene: 170751605
Centisome position: 91.22
GC content: 64.08
Gene sequence:
>426_bases ATGGGCTCGACGGTTAACATCCTGCTGGTCGACGACGACGAGGTCGACGTTCAGGGGCTCAAGCGCGCCTTCAAGAAGAG CAAGATCGGAAACCCGATCACGGTCGCCCGCGACGGCGTCGAGGCCCTGGAGATCCTGCGCGGCGAGAACGGGCATGCCA AGCTGCCGAGGCCTCACCTGATCCTGCTCGACCTGAACATGCCGCGCATGAACGGCATCGAGTTCCTGGAGGCGATCCGC GCCGACCAGGACCTGCGTTCGGCGGTGGTGTTCATGATCACCACGTCGAAGGCCGACGAGGACCGGATGCGGGCCTACGG CCACAACGTCGCCGGCTACATCGTCAAGCGCGACCCGGCCAACACCTTCATGGAAGCGGTGGCGCTCCTGGAGCACTACT GGAAGGTGGTCGAGTTTCCTGCATAG
Upstream 100 bases:
>100_bases GACCGCCAGGGCGGCAAGGTCTGGCTCTCCGACGGGCCCGACGGGCGCGGCTTGGCGGTGCATTTCACGTGGCCGCGCGA CGGCCGGAAGGGACACGCGG
Downstream 100 bases:
>100_bases TCCCCATCGTGACGAACCCGACCCGCATCCTGCTGATCGACGACGACGCGGTCGACCGCGCGGCCGTGCGGCGGGCGCTC GCCAAGTCCGGCCTCGCCCA
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MGSTVNILLVDDDEVDVQGLKRAFKKSKIGNPITVARDGVEALEILRGENGHAKLPRPHLILLDLNMPRMNGIEFLEAIR ADQDLRSAVVFMITTSKADEDRMRAYGHNVAGYIVKRDPANTFMEAVALLEHYWKVVEFPA
Sequences:
>Translated_141_residues MGSTVNILLVDDDEVDVQGLKRAFKKSKIGNPITVARDGVEALEILRGENGHAKLPRPHLILLDLNMPRMNGIEFLEAIR ADQDLRSAVVFMITTSKADEDRMRAYGHNVAGYIVKRDPANTFMEAVALLEHYWKVVEFPA >Mature_140_residues GSTVNILLVDDDEVDVQGLKRAFKKSKIGNPITVARDGVEALEILRGENGHAKLPRPHLILLDLNMPRMNGIEFLEAIRA DQDLRSAVVFMITTSKADEDRMRAYGHNVAGYIVKRDPANTFMEAVALLEHYWKVVEFPA
Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 15801; Mature: 15670
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTVNILLVDDDEVDVQGLKRAFKKSKIGNPITVARDGVEALEILRGENGHAKLPRPHL CCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCEE ILLDLNMPRMNGIEFLEAIRADQDLRSAVVFMITTSKADEDRMRAYGHNVAGYIVKRDPA EEEECCCCCCCHHHHHHHHHCCHHHHHEEEEEEECCCCCHHHHHHHCCCEEEEEEEECCH NTFMEAVALLEHYWKVVEFPA HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GSTVNILLVDDDEVDVQGLKRAFKKSKIGNPITVARDGVEALEILRGENGHAKLPRPHL CCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCEE ILLDLNMPRMNGIEFLEAIRADQDLRSAVVFMITTSKADEDRMRAYGHNVAGYIVKRDPA EEEECCCCCCCHHHHHHHHHCCHHHHHEEEEEEECCCCCHHHHHHHCCCEEEEEEEECCH NTFMEAVALLEHYWKVVEFPA HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9278513 [H]