| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is lon [H]
Identifier: 170751516
GI number: 170751516
Start: 5459795
End: 5462221
Strand: Direct
Name: lon [H]
Synonym: Mrad2831_5136
Alternate gene names: 170751516
Gene position: 5459795-5462221 (Clockwise)
Preceding gene: 170751515
Following gene: 170751517
Centisome position: 89.83
GC content: 66.67
Gene sequence:
>2427_bases ATGTCACAGTCGAAATCGCGCCAGCCGGTGGTCCCGGGTTCGACGGGCTCCTACGCCGTCCTCCCCCTGCGCGACATCGT CGTCTTCCCGCACATGATCGTGCCCCTGTTCGTGGGCCGCGAGAAGTCGATCCGCGCCCTCGAGGAGGCCGTCCGCACCG ACCGCCACATCCTGCTCGCCACCCAGATCAACGCGGGCGACGACGACCCGGCGACCGACGCGATCTACAAGATCGGTACC CTCGCCTCGGTGCTCCAGCTGCTGAAGCTGCCCGACGGCACCGTGAAGGTGCTGGTCGAGGGCGTCGGCCGCGCGAAGGT CGTGGACTTCACCCGCTCGGACGAGTTCTACGAGGCGACCGCCGAGGCGCTCCACGACGAGCTCGGCGACCGCGTCGAGG CCGAGGCGCTCGCGCGCTCCGTGCTCTCGGAGTTCGAGAACTACGTCAAGCTCAACAAGAAGATCTCCCCCGAGGTCGTC TCCGCCGTGACGCAGATCGACGAGCCGTCGAAGCTCGCCGACACGATCGGCTCGCACCTGCTCGTCAAGATCTCCGACAA GCAGGGCATCTTGGAGACCCCCACGGTGGCGCAGCGCCTCGAGCGCGTGCTGTCGCTGATGGAGAGCGAGATCTCCGTGC TCCAGGTGGAGAAGCGCATCCGGACCCGCGTCAAGCGGCAGATGGAGAAGACCCAGCGCGAGTACTACCTGAACGAGCAG ATGAAGGCGATCCAGAAGGAGCTGGGCGACTCCGAGGATGGCCGCGACGAGCTGGCCGAGCTGGAAGAGAAGATCGAGAA GACCAAGCTCTCCAAGGAGGCCCGCGACAAGGCCACCGCCGAGCTGAAGAAGCTGCGGCAGATGTCGCCGATGTCGGCCG AGGCGACCGTCGTGCGCAACTACCTCGACTGGATGCTCGGCATCCCGTGGGGCAAGCGCTCGAAGATCAAGAAGGACCTG CTCGGCGCCCAGGCGCTGCTCGACGAGGACCATTTCGGCCTCGACAAGGTCAAGGAGCGGATCGTCGAGTACCTCGCCGT GCAGCAGCGGGCGAACAAGCTCACCGGCCCGATCCTGTGCCTCGTCGGTCCCCCCGGCGTCGGCAAGACCTCGCTCGGCA AGTCCATCGCCAAGGCGACGGGTCGCGAGTTCGTCCGGATGTCGCTCGGCGGCGTGCGCGATGAGGCCGAGATCCGCGGT CACCGCCGGACCTATATCGGTTCGATGCCCGGCAAGATCGTGCAGTCGATGCGCAAGGCCAAAACCTCGAACCCGCTCAT CCTGCTCGACGAGATCGACAAGATGGGCATGGACTTCCGCGGCGATCCGTCGGCGGCGCTCCTCGAGGTTCTCGACCCTG AGCAGAACAGCACCTTCAACGACCACTACCTGGAGGTGGATTACGACCTCTCGAACGTGATGTTCGTGACCACGGCCAAC ACCCTCAACATCCCGGGCCCGCTCATGGACCGGATGGAGGTGATCCGCATCGCCGGGTACACCGAGGAGGAGAAGGTCGA GATCGCGCGCAAGCACCTGATCCCGAACGCCCTGAAGAAGCACGGCCTCGGGACGCACGAGTGGTCGATCGACGATGACG GACTGATGATGCTGGTCCGCCGCTACACGCGGGAGGCCGGCGTCCGCAACCTGGAGCGCGAGCTGTCCAACCTGATCCGC AAGGCGGTGAAGGAGATCCTGATCACCAAGACCAAGTCGGTCGCGGTGACCCCGGAGACCCTTCCGGTCTTCCTCGGCCC GCCGAAGTTCCGCTACGGCGAGATCGACGCGGACGATCAGGTCGGTGTGGTGACGGGTCTGGCCTGGACCGAGGTCGGCG GCGAGCTGCTGACGATCGAGGGCGTCATGATGCCCGGCAAGGGCAAGATGACGGTCACCGGCAACCTGAAGGACGTGATG AAGGAGTCGATCTCGGCGGCGGCGAGCTACGTCCGCTCCCGGGCGATCGATTTCGGGATCGAGCCGCCGCTCTTCGATCG GCGCGACATCCACGTCCACGTTCCGGAGGGGGCGACCCCGAAGGACGGTCCGTCGGCCGGCATCGCCATGGCCACCGCGA TCATCTCGACGCTGACCGGGATCCCGGTCCGCCGAGACGTCGCGATGACCGGCGAGGTGACGCTCCGCGGCCGGGTCCTG CCGATCGGCGGCCTGAAGGAGAAGCTGCTCGCCGCGCTCCGCGGCGGCATCAAGACGGTGCTGATCCCCGAGGAGAACGC CAAGGACATCGCCGAGGTGCCCGACAGCGTGAAGAACGGCCTGGAGATCATCCCGGTCTCGCGGATGGATCAGGTGCTGG AGAAGGCGTTGGTCCGCCAACCGGAGGCGATCGAGTGGGAGGAGCCGCTGCCGGTGGCCAAGCCCGCCCGCACCGAAGAG GACGGCGCGGCCTTCGTGGCCCACTGA
Upstream 100 bases:
>100_bases AGTTAGCGAAATCCGACCCTCGCGGCCCGGTCGGCACCTGGCTGTAGGCGCGCTCCGTGCATGGGGGCGCCGAACCGGGC GTCCCTGAGAGGAAGTCAGC
Downstream 100 bases:
>100_bases GCGTCCTGACTGAGTGAGACGAGCCCCCGGCGCCCTGAGCCCCGGGGGCTTCTTCGTGCGCGGATCCAGGCACGGAGGAC CGGATGCGTATCCTGCTGAT
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 808; Mature: 807
Protein sequence:
>808_residues MSQSKSRQPVVPGSTGSYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEAVRTDRHILLATQINAGDDDPATDAIYKIGT LASVLQLLKLPDGTVKVLVEGVGRAKVVDFTRSDEFYEATAEALHDELGDRVEAEALARSVLSEFENYVKLNKKISPEVV SAVTQIDEPSKLADTIGSHLLVKISDKQGILETPTVAQRLERVLSLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQ MKAIQKELGDSEDGRDELAELEEKIEKTKLSKEARDKATAELKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSKIKKDL LGAQALLDEDHFGLDKVKERIVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRG HRRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNSTFNDHYLEVDYDLSNVMFVTTAN TLNIPGPLMDRMEVIRIAGYTEEEKVEIARKHLIPNALKKHGLGTHEWSIDDDGLMMLVRRYTREAGVRNLERELSNLIR KAVKEILITKTKSVAVTPETLPVFLGPPKFRYGEIDADDQVGVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKDVM KESISAAASYVRSRAIDFGIEPPLFDRRDIHVHVPEGATPKDGPSAGIAMATAIISTLTGIPVRRDVAMTGEVTLRGRVL PIGGLKEKLLAALRGGIKTVLIPEENAKDIAEVPDSVKNGLEIIPVSRMDQVLEKALVRQPEAIEWEEPLPVAKPARTEE DGAAFVAH
Sequences:
>Translated_808_residues MSQSKSRQPVVPGSTGSYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEAVRTDRHILLATQINAGDDDPATDAIYKIGT LASVLQLLKLPDGTVKVLVEGVGRAKVVDFTRSDEFYEATAEALHDELGDRVEAEALARSVLSEFENYVKLNKKISPEVV SAVTQIDEPSKLADTIGSHLLVKISDKQGILETPTVAQRLERVLSLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQ MKAIQKELGDSEDGRDELAELEEKIEKTKLSKEARDKATAELKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSKIKKDL LGAQALLDEDHFGLDKVKERIVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRG HRRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNSTFNDHYLEVDYDLSNVMFVTTAN TLNIPGPLMDRMEVIRIAGYTEEEKVEIARKHLIPNALKKHGLGTHEWSIDDDGLMMLVRRYTREAGVRNLERELSNLIR KAVKEILITKTKSVAVTPETLPVFLGPPKFRYGEIDADDQVGVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKDVM KESISAAASYVRSRAIDFGIEPPLFDRRDIHVHVPEGATPKDGPSAGIAMATAIISTLTGIPVRRDVAMTGEVTLRGRVL PIGGLKEKLLAALRGGIKTVLIPEENAKDIAEVPDSVKNGLEIIPVSRMDQVLEKALVRQPEAIEWEEPLPVAKPARTEE DGAAFVAH >Mature_807_residues SQSKSRQPVVPGSTGSYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEAVRTDRHILLATQINAGDDDPATDAIYKIGTL ASVLQLLKLPDGTVKVLVEGVGRAKVVDFTRSDEFYEATAEALHDELGDRVEAEALARSVLSEFENYVKLNKKISPEVVS AVTQIDEPSKLADTIGSHLLVKISDKQGILETPTVAQRLERVLSLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQM KAIQKELGDSEDGRDELAELEEKIEKTKLSKEARDKATAELKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSKIKKDLL GAQALLDEDHFGLDKVKERIVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGH RRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNSTFNDHYLEVDYDLSNVMFVTTANT LNIPGPLMDRMEVIRIAGYTEEEKVEIARKHLIPNALKKHGLGTHEWSIDDDGLMMLVRRYTREAGVRNLERELSNLIRK AVKEILITKTKSVAVTPETLPVFLGPPKFRYGEIDADDQVGVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKDVMK ESISAAASYVRSRAIDFGIEPPLFDRRDIHVHVPEGATPKDGPSAGIAMATAIISTLTGIPVRRDVAMTGEVTLRGRVLP IGGLKEKLLAALRGGIKTVLIPEENAKDIAEVPDSVKNGLEIIPVSRMDQVLEKALVRQPEAIEWEEPLPVAKPARTEED GAAFVAH
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=669, Percent_Identity=42.0029895366218, Blast_Score=543, Evalue=1e-154, Organism=Homo sapiens, GI31377667, Length=780, Percent_Identity=39.2307692307692, Blast_Score=520, Evalue=1e-147, Organism=Escherichia coli, GI1786643, Length=767, Percent_Identity=62.5814863102999, Blast_Score=991, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=655, Percent_Identity=42.5954198473282, Blast_Score=513, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17556486, Length=547, Percent_Identity=38.5740402193784, Blast_Score=419, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6319449, Length=724, Percent_Identity=41.4364640883978, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI24666867, Length=681, Percent_Identity=42.143906020558, Blast_Score=527, Evalue=1e-149, Organism=Drosophila melanogaster, GI221513036, Length=681, Percent_Identity=42.143906020558, Blast_Score=526, Evalue=1e-149,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 89255; Mature: 89124
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSKSRQPVVPGSTGSYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEAVRTDRHILLA CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE TQINAGDDDPATDAIYKIGTLASVLQLLKLPDGTVKVLVEGVGRAKVVDFTRSDEFYEAT EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHHHHHH AEALHDELGDRVEAEALARSVLSEFENYVKLNKKISPEVVSAVTQIDEPSKLADTIGSHL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCEE LVKISDKQGILETPTVAQRLERVLSLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQ EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKAIQKELGDSEDGRDELAELEEKIEKTKLSKEARDKATAELKKLRQMSPMSAEATVVRN HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH YLDWMLGIPWGKRSKIKKDLLGAQALLDEDHFGLDKVKERIVEYLAVQQRANKLTGPILC HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE LVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRTYIGSMPGKIVQSMRKA EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHH KTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNSTFNDHYLEVDYDLSNVMFVTTAN CCCCCEEEEECHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECC TLNIPGPLMDRMEVIRIAGYTEEEKVEIARKHLIPNALKKHGLGTHEWSIDDDGLMMLVR CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHH RYTREAGVRNLERELSNLIRKAVKEILITKTKSVAVTPETLPVFLGPPKFRYGEIDADDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCCCCCC VGVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKDVMKESISAAASYVRSRAIDFGI CCCEECCHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC EPPLFDRRDIHVHVPEGATPKDGPSAGIAMATAIISTLTGIPVRRDVAMTGEVTLRGRVL CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEE PIGGLKEKLLAALRGGIKTVLIPEENAKDIAEVPDSVKNGLEIIPVSRMDQVLEKALVRQ ECCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHCCCEEEEHHHHHHHHHHHHHCC PEAIEWEEPLPVAKPARTEEDGAAFVAH CCCCCCCCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure SQSKSRQPVVPGSTGSYAVLPLRDIVVFPHMIVPLFVGREKSIRALEEAVRTDRHILLA CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE TQINAGDDDPATDAIYKIGTLASVLQLLKLPDGTVKVLVEGVGRAKVVDFTRSDEFYEAT EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHHHHHH AEALHDELGDRVEAEALARSVLSEFENYVKLNKKISPEVVSAVTQIDEPSKLADTIGSHL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCEE LVKISDKQGILETPTVAQRLERVLSLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQ EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKAIQKELGDSEDGRDELAELEEKIEKTKLSKEARDKATAELKKLRQMSPMSAEATVVRN HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH YLDWMLGIPWGKRSKIKKDLLGAQALLDEDHFGLDKVKERIVEYLAVQQRANKLTGPILC HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE LVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRTYIGSMPGKIVQSMRKA EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHH KTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNSTFNDHYLEVDYDLSNVMFVTTAN CCCCCEEEEECHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECC TLNIPGPLMDRMEVIRIAGYTEEEKVEIARKHLIPNALKKHGLGTHEWSIDDDGLMMLVR CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHH RYTREAGVRNLERELSNLIRKAVKEILITKTKSVAVTPETLPVFLGPPKFRYGEIDADDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCCCCCC VGVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKDVMKESISAAASYVRSRAIDFGI CCCEECCHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC EPPLFDRRDIHVHVPEGATPKDGPSAGIAMATAIISTLTGIPVRRDVAMTGEVTLRGRVL CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEE PIGGLKEKLLAALRGGIKTVLIPEENAKDIAEVPDSVKNGLEIIPVSRMDQVLEKALVRQ ECCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHCCCEEEEHHHHHHHHHHHHHCC PEAIEWEEPLPVAKPARTEEDGAAFVAH CCCCCCCCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA