Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is yhhT [H]
Identifier: 170748558
GI number: 170748558
Start: 2280479
End: 2282581
Strand: Reverse
Name: yhhT [H]
Synonym: Mrad2831_2140
Alternate gene names: 170748558
Gene position: 2282581-2280479 (Counterclockwise)
Preceding gene: 170748559
Following gene: 170748557
Centisome position: 37.56
GC content: 73.75
Gene sequence:
>2103_bases ATGGGCACGAGAACCCCGGTCGGGGTCGAACCGGCAGCGCGGCCCGGAACTTCCCTGATCCCGCCGCGGCCGACCCGCGT GGCCGCCGCCGAGACGCCGCGGGCCGCCATGGCGTCGCCGGTCGTGGTCGGCGCCACCATCATCGCCGCCCTGTATTTCG GCCGCGAGATCTTCATCCCGATCGCGATCGCGCTGCTGCTGTCGTTCGTGCTGACGCCGCTGGTGAACCGCCTGCGGCGG CTGCGGCTGCCGCGGCTGGCGGCGGTGGGCGTCAGCGTGCTCCTGACCGTCGGCATCGTGGCCGCCCTGGCCACCCTGAT CGGCATCCAGGCCGCCGACCTCGCGGGCGACGTCCCCCGCTACCGCGACACCATCGAGCGCAAGATCGACGGGCTGCGGA ACTCCCCCGTCGGCCACGTCACGCAGTACGTCGCCAATATCGGGCGGGCGCTCCACGGCGCGAAGGAAGCCGGCAGCCCG GAGACGCAGTCGGCCGCCCAGCAATCCGCCACACCGCCCTCGACACCGCCCTCGACACCGCCCTCGACACCGTCACCGGG CCCCGAGCCGACCCAGGCCGCGCCGAAGCCCGTCCTCGTCGAGGTCGCCACGACCCCGCCGGGCTCCCTGGAGATGCTCT CGACCGTGCTCACGCCGGTGATGCATCCCCTGGCCACGGTCGGCATCGTCTTCGTGGTGCTGCTGTTCGTGCTGATGCAG CGCGAGGACCTGCGCGACCGCATGATCCGGCTGGCCGGATCGAGCGACCTGCACCGGACCACCGTGGCCATCGACGACGC GGCCAAGCGCCTGAGCCGCTACTTCGTGGTGCAGCTGGCCCTCAACGCCGCCTTCGGCGTGGTCATCGGCATCGGCCTCT ACATCATCGGCGTGCCGAATCCGGTGCTCTGGGCGATCTTCGCGGCCCTGATGCGCTTCGTGCCGTATCTCGGGGCGGTC CTGTCGGCGATCCTGCCGATGGCGCTCGCCGCCGCGGTCGATCCCGGCTGGAACATGATGATCGCGGTGGCGATCCTGTT CATCGTCCTGGAGCCGCTGACCGGCCAGGTGTTCGAGCCGATCTTCTACGGGCAGTCCACCGGCCTCTCGCCCTTCGCGG TCCTGGTCTCGGCCCTGTTCTGGACGTGGCTCTGGGGGCCGGTCGGGCTGCTGCTCTCGACGCCGCTGACCGTCTGCCTC GTGGTGCTCGGCCGCTACGTCGAGCACCTGGAGTTCCTGGACGTGCTGTTCGGCGACCGGCCGGCGCTGACGCCCGTCCA GAACTTCTACCAGCGCATCCTGGCGGGCGATTCCGAGGAGGTGCTGGGCCATGCCGAGTTGATCCTGCAGCAGTGCTCGC TCTCCTCCTACTACGACGAGGTCGTGCTCAAGGCGCTGGAACTCGCCGCCCGCGACGCGGCCCGCGGGGTGCTGACGGCG CAGCAGAAGGGCGCGATGCGGGCCGCGCTCACCGAGCTGGTCGCCGACCTCTCCGACCGGAGCGACGCCGTCACGGGGGC GACGGGCGAGGGCGAGGAGAGCGCTTGCAGCCCGCTCCCGATGGGACCCGCCCCGGAGGCGCTGCCCGCCGCCTGGACGC GCGAGGGCGCGGTGCTGTGCGTGGCCGGGCGCGGCTTCCTGGACGAGGCCGCGGCCGCGATCCTCGCGCAGATCCTGGAG AAGCGCGGCCTCGGCGTCCGCACGGTCCCCTTCGCCGAGACGGCCTCCGTGCGGATCGGCCGGTTCGAGGCCGGGCCGGC GCGCATCGCCTGCGTGGTCTCCCTGGCGCTCGACGGCGAGCCGACCCACCTGCGCCGCCTGATCCGCCGGCTGAGGGGCC GGGTCCCCGGCGTGCCGGTCCTGCTCGGCCTGTGGCTCGCCCAGGACGGTGGGGCGAACCGCCTCGCCGGCGGGCCGGGG GGCGCCGCCGAGGCCGACGCGCAGGTGGGATCGCTGCGCGAGGCGGTCGAGGCTATCCTGGCGGCCGCGCAGGAGGACGC GGCGGCGGCTGACGCGCCGGAGGGCGGGTCGGACGGCGCCGCGGAGAGCGCCCCGGACGCCTGCGGCGAAACGGCGGGGC TGCCCGCGCCGGCCAGAGCGTGA
Upstream 100 bases:
>100_bases CCGCGGGATCGTTTTCGCGTCCTGTGCCGTTCCCCGTCCGCGAGGCCTCCGCCGCTCCCGGCGGCCGCCCGCGCGTGGCG TTCGGGACGTGGATCACGGT
Downstream 100 bases:
>100_bases GCCGAGGATGCGCGGGGGCGAGGGCTTGACGGGCAGGGGCGCGCGCCGGTTTCGTCGGAACGGGCCGGTTGGCCGCGCGG CCTTCGGGCGGAACAGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MGTRTPVGVEPAARPGTSLIPPRPTRVAAAETPRAAMASPVVVGATIIAALYFGREIFIPIAIALLLSFVLTPLVNRLRR LRLPRLAAVGVSVLLTVGIVAALATLIGIQAADLAGDVPRYRDTIERKIDGLRNSPVGHVTQYVANIGRALHGAKEAGSP ETQSAAQQSATPPSTPPSTPPSTPSPGPEPTQAAPKPVLVEVATTPPGSLEMLSTVLTPVMHPLATVGIVFVVLLFVLMQ REDLRDRMIRLAGSSDLHRTTVAIDDAAKRLSRYFVVQLALNAAFGVVIGIGLYIIGVPNPVLWAIFAALMRFVPYLGAV LSAILPMALAAAVDPGWNMMIAVAILFIVLEPLTGQVFEPIFYGQSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCL VVLGRYVEHLEFLDVLFGDRPALTPVQNFYQRILAGDSEEVLGHAELILQQCSLSSYYDEVVLKALELAARDAARGVLTA QQKGAMRAALTELVADLSDRSDAVTGATGEGEESACSPLPMGPAPEALPAAWTREGAVLCVAGRGFLDEAAAAILAQILE KRGLGVRTVPFAETASVRIGRFEAGPARIACVVSLALDGEPTHLRRLIRRLRGRVPGVPVLLGLWLAQDGGANRLAGGPG GAAEADAQVGSLREAVEAILAAAQEDAAAADAPEGGSDGAAESAPDACGETAGLPAPARA
Sequences:
>Translated_700_residues MGTRTPVGVEPAARPGTSLIPPRPTRVAAAETPRAAMASPVVVGATIIAALYFGREIFIPIAIALLLSFVLTPLVNRLRR LRLPRLAAVGVSVLLTVGIVAALATLIGIQAADLAGDVPRYRDTIERKIDGLRNSPVGHVTQYVANIGRALHGAKEAGSP ETQSAAQQSATPPSTPPSTPPSTPSPGPEPTQAAPKPVLVEVATTPPGSLEMLSTVLTPVMHPLATVGIVFVVLLFVLMQ REDLRDRMIRLAGSSDLHRTTVAIDDAAKRLSRYFVVQLALNAAFGVVIGIGLYIIGVPNPVLWAIFAALMRFVPYLGAV LSAILPMALAAAVDPGWNMMIAVAILFIVLEPLTGQVFEPIFYGQSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCL VVLGRYVEHLEFLDVLFGDRPALTPVQNFYQRILAGDSEEVLGHAELILQQCSLSSYYDEVVLKALELAARDAARGVLTA QQKGAMRAALTELVADLSDRSDAVTGATGEGEESACSPLPMGPAPEALPAAWTREGAVLCVAGRGFLDEAAAAILAQILE KRGLGVRTVPFAETASVRIGRFEAGPARIACVVSLALDGEPTHLRRLIRRLRGRVPGVPVLLGLWLAQDGGANRLAGGPG GAAEADAQVGSLREAVEAILAAAQEDAAAADAPEGGSDGAAESAPDACGETAGLPAPARA >Mature_699_residues GTRTPVGVEPAARPGTSLIPPRPTRVAAAETPRAAMASPVVVGATIIAALYFGREIFIPIAIALLLSFVLTPLVNRLRRL RLPRLAAVGVSVLLTVGIVAALATLIGIQAADLAGDVPRYRDTIERKIDGLRNSPVGHVTQYVANIGRALHGAKEAGSPE TQSAAQQSATPPSTPPSTPPSTPSPGPEPTQAAPKPVLVEVATTPPGSLEMLSTVLTPVMHPLATVGIVFVVLLFVLMQR EDLRDRMIRLAGSSDLHRTTVAIDDAAKRLSRYFVVQLALNAAFGVVIGIGLYIIGVPNPVLWAIFAALMRFVPYLGAVL SAILPMALAAAVDPGWNMMIAVAILFIVLEPLTGQVFEPIFYGQSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCLV VLGRYVEHLEFLDVLFGDRPALTPVQNFYQRILAGDSEEVLGHAELILQQCSLSSYYDEVVLKALELAARDAARGVLTAQ QKGAMRAALTELVADLSDRSDAVTGATGEGEESACSPLPMGPAPEALPAAWTREGAVLCVAGRGFLDEAAAAILAQILEK RGLGVRTVPFAETASVRIGRFEAGPARIACVVSLALDGEPTHLRRLIRRLRGRVPGVPVLLGLWLAQDGGANRLAGGPGG AAEADAQVGSLREAVEAILAAAQEDAAAADAPEGGSDGAAESAPDACGETAGLPAPARA
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI87082271, Length=161, Percent_Identity=38.5093167701863, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1787885, Length=137, Percent_Identity=32.8467153284672, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 73027; Mature: 72895
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRTPVGVEPAARPGTSLIPPRPTRVAAAETPRAAMASPVVVGATIIAALYFGREIFIP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCHHHHHH IAIALLLSFVLTPLVNRLRRLRLPRLAAVGVSVLLTVGIVAALATLIGIQAADLAGDVPR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH YRDTIERKIDGLRNSPVGHVTQYVANIGRALHGAKEAGSPETQSAAQQSATPPSTPPSTP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCCCCCCCCCC PSTPSPGPEPTQAAPKPVLVEVATTPPGSLEMLSTVLTPVMHPLATVGIVFVVLLFVLMQ CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDLRDRMIRLAGSSDLHRTTVAIDDAAKRLSRYFVVQLALNAAFGVVIGIGLYIIGVPN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC PVLWAIFAALMRFVPYLGAVLSAILPMALAAAVDPGWNMMIAVAILFIVLEPLTGQVFEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IFYGQSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRYVEHLEFLDVLFGDR HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PALTPVQNFYQRILAGDSEEVLGHAELILQQCSLSSYYDEVVLKALELAARDAARGVLTA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQKGAMRAALTELVADLSDRSDAVTGATGEGEESACSPLPMGPAPEALPAAWTREGAVLC HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHCCCCCEEE VAGRGFLDEAAAAILAQILEKRGLGVRTVPFAETASVRIGRFEAGPARIACVVSLALDGE EECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCHHEEHHEEHHCCCC PTHLRRLIRRLRGRVPGVPVLLGLWLAQDGGANRLAGGPGGAAEADAQVGSLREAVEAIL HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AAAQEDAAAADAPEGGSDGAAESAPDACGETAGLPAPARA HHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure GTRTPVGVEPAARPGTSLIPPRPTRVAAAETPRAAMASPVVVGATIIAALYFGREIFIP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCHHHHHH IAIALLLSFVLTPLVNRLRRLRLPRLAAVGVSVLLTVGIVAALATLIGIQAADLAGDVPR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH YRDTIERKIDGLRNSPVGHVTQYVANIGRALHGAKEAGSPETQSAAQQSATPPSTPPSTP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCCCCCCCCCC PSTPSPGPEPTQAAPKPVLVEVATTPPGSLEMLSTVLTPVMHPLATVGIVFVVLLFVLMQ CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDLRDRMIRLAGSSDLHRTTVAIDDAAKRLSRYFVVQLALNAAFGVVIGIGLYIIGVPN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC PVLWAIFAALMRFVPYLGAVLSAILPMALAAAVDPGWNMMIAVAILFIVLEPLTGQVFEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH IFYGQSTGLSPFAVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRYVEHLEFLDVLFGDR HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PALTPVQNFYQRILAGDSEEVLGHAELILQQCSLSSYYDEVVLKALELAARDAARGVLTA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQKGAMRAALTELVADLSDRSDAVTGATGEGEESACSPLPMGPAPEALPAAWTREGAVLC HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCHHHCCCCCEEE VAGRGFLDEAAAAILAQILEKRGLGVRTVPFAETASVRIGRFEAGPARIACVVSLALDGE EECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCCCHHEEHHEEHHCCCC PTHLRRLIRRLRGRVPGVPVLLGLWLAQDGGANRLAGGPGGAAEADAQVGSLREAVEAIL HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AAAQEDAAAADAPEGGSDGAAESAPDACGETAGLPAPARA HHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]