| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is birA [H]
Identifier: 170748463
GI number: 170748463
Start: 2174398
End: 2175201
Strand: Reverse
Name: birA [H]
Synonym: Mrad2831_2045
Alternate gene names: 170748463
Gene position: 2175201-2174398 (Counterclockwise)
Preceding gene: 170748464
Following gene: 170748462
Centisome position: 35.79
GC content: 75.25
Gene sequence:
>804_bases TTGAGCTACCGACTCGGGCCCTCGGCGCGCGCCGAGGGCCACCGCCTGCACGTCCACGACACCCTCGGCTCCACCAACAC GGAGGCCATGGCGCGCGCGCGCGCGGGCGAGACCGGCCCGCTCTGGGTCGTGACGCACCGCCAGGAGACGGGCCGCGGCC GGCGCGGCAACAGCTGGGCCTCGCTTCCCGGGAACCTCGCGGCCAGCGTGCTCTGGCCCGTTGCCGGGGTCGCGCCGGAC CACCTCGCCGAACTCGGCTTCGTGGCCGGCCTCGCCCTGATCGAGGCGCTGGAGGCGGCCTGCGGCACCCTGCCGGATAC CGGATCCGGCGCCGGGGCCCGATCTTTCCGGCTGAAATGGCCGAACGACGTTCTGCTCGGCGGGGCGAAGCTCGCGGGTC TTCTCCTGGAGGCGGAGACGCTGCCCGGCGGCCGGCGCGCCGCCGTCATCGGCTTCGGCGTGAACGTCGCGGCCGCGCCG GACGGCCTGGAGGCCGCGAGCTTGGCGGCGGCGGGTTACGCGCGCGACGCCGAGGCGCTACTGGAACATCTCTCGGACCG GATGGCCGCGCGGGCGCGCGCCTGGGACCGAGGACGGAATTTCGCTGACCTGCGCGCGGCCTGGCTCGCGCGGGCCGCGG GTCTCGGATCGGAGATCGCGGTGCACAGCGGCGGGCACACCCTGCGGGGCGTGTTCGAGACGATCGACGAGGGGGGGCGG CTCGTGATCCTCGCCCCCGATGGGAACCGGCATACCGTGACGGCGGGCGAGGTGCATTTCGGATCGGCCGCGACGGCGGC CTGA
Upstream 100 bases:
>100_bases CTCGCCCTGTCGAGCGTCGTGGTGGTGCTGTTCTTCCTGCTGCCCGGCCCGCTGGTCGGCGCCGCCGGCCGGGCCGCCAA GTCGCTGTTCTAGGACGGCC
Downstream 100 bases:
>100_bases GTTTGGACGACGACAGATGGTTAAAGGACAGGAGGAGCTGGTCTTCCTGCCGCTCGGCGGCGTGGGCGAGATCGGGATGA ACGCGGCGCTCTACGGGTTC
Product: biotin--acetyl-CoA-carboxylase ligase
Products: NA
Alternate protein names: Biotin--protein ligase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSYRLGPSARAEGHRLHVHDTLGSTNTEAMARARAGETGPLWVVTHRQETGRGRRGNSWASLPGNLAASVLWPVAGVAPD HLAELGFVAGLALIEALEAACGTLPDTGSGAGARSFRLKWPNDVLLGGAKLAGLLLEAETLPGGRRAAVIGFGVNVAAAP DGLEAASLAAAGYARDAEALLEHLSDRMAARARAWDRGRNFADLRAAWLARAAGLGSEIAVHSGGHTLRGVFETIDEGGR LVILAPDGNRHTVTAGEVHFGSAATAA
Sequences:
>Translated_267_residues MSYRLGPSARAEGHRLHVHDTLGSTNTEAMARARAGETGPLWVVTHRQETGRGRRGNSWASLPGNLAASVLWPVAGVAPD HLAELGFVAGLALIEALEAACGTLPDTGSGAGARSFRLKWPNDVLLGGAKLAGLLLEAETLPGGRRAAVIGFGVNVAAAP DGLEAASLAAAGYARDAEALLEHLSDRMAARARAWDRGRNFADLRAAWLARAAGLGSEIAVHSGGHTLRGVFETIDEGGR LVILAPDGNRHTVTAGEVHFGSAATAA >Mature_266_residues SYRLGPSARAEGHRLHVHDTLGSTNTEAMARARAGETGPLWVVTHRQETGRGRRGNSWASLPGNLAASVLWPVAGVAPDH LAELGFVAGLALIEALEAACGTLPDTGSGAGARSFRLKWPNDVLLGGAKLAGLLLEAETLPGGRRAAVIGFGVNVAAAPD GLEAASLAAAGYARDAEALLEHLSDRMAARARAWDRGRNFADLRAAWLARAAGLGSEIAVHSGGHTLRGVFETIDEGGRL VILAPDGNRHTVTAGEVHFGSAATAA
Specific function: Activates biotin to form biotinyl-5'-adenylate and transfers the biotin moiety to biotin-accepting proteins [H]
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biotin--protein ligase family [H]
Homologues:
Organism=Escherichia coli, GI1790408, Length=273, Percent_Identity=27.4725274725275, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004408 - InterPro: IPR003142 - InterPro: IPR004143 [H]
Pfam domain/function: PF02237 BPL_C; PF03099 BPL_LipA_LipB [H]
EC number: =6.3.4.15 [H]
Molecular weight: Translated: 27518; Mature: 27387
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRLGPSARAEGHRLHVHDTLGSTNTEAMARARAGETGPLWVVTHRQETGRGRRGNSWA CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECHHCCCCCCCCCCC SLPGNLAASVLWPVAGVAPDHLAELGFVAGLALIEALEAACGTLPDTGSGAGARSFRLKW CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC PNDVLLGGAKLAGLLLEAETLPGGRRAAVIGFGVNVAAAPDGLEAASLAAAGYARDAEAL CCCEEECCHHHHHHEEECCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHCCCCCHHHH LEHLSDRMAARARAWDRGRNFADLRAAWLARAAGLGSEIAVHSGGHTLRGVFETIDEGGR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCE LVILAPDGNRHTVTAGEVHFGSAATAA EEEEECCCCCEEEEECCEECCCCCCCC >Mature Secondary Structure SYRLGPSARAEGHRLHVHDTLGSTNTEAMARARAGETGPLWVVTHRQETGRGRRGNSWA CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECHHCCCCCCCCCCC SLPGNLAASVLWPVAGVAPDHLAELGFVAGLALIEALEAACGTLPDTGSGAGARSFRLKW CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC PNDVLLGGAKLAGLLLEAETLPGGRRAAVIGFGVNVAAAPDGLEAASLAAAGYARDAEAL CCCEEECCHHHHHHEEECCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHCCCCCHHHH LEHLSDRMAARARAWDRGRNFADLRAAWLARAAGLGSEIAVHSGGHTLRGVFETIDEGGR HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCE LVILAPDGNRHTVTAGEVHFGSAATAA EEEEECCCCCEEEEECCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8422400 [H]