| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yusP [H]
Identifier: 170748427
GI number: 170748427
Start: 2133888
End: 2135426
Strand: Reverse
Name: yusP [H]
Synonym: Mrad2831_2009
Alternate gene names: 170748427
Gene position: 2135426-2133888 (Counterclockwise)
Preceding gene: 170748429
Following gene: 170748426
Centisome position: 35.13
GC content: 72.25
Gene sequence:
>1539_bases GTGGCCAGTCCCGTCGCCGTCACCGAGGTCCAGCCGCAAACCCGGGCGCGGCCGGCCGGCCCGCAGGCCGCGCTCAGCCC CGGCGAGATCCGCGCCATCGTCTACGGGCTGATGACCGCGATGCTGCTCGCGGCCCTCGACCAGACCATCGTGGCGACCG CCATGCCGACCATCGGCCTCGACCTCGGCGACGCCGCGAACCTGCCCTGGATCGTCACCGCCTACCTGCTGGCCTCCACG GCGGTGACCCCGCTCTACGGCAAGCTCAGCGACATCCACGGCCGGCGGATCATGCTGCTGATCGCCATCGCGACCTTCGT GGTCGGCTCGCTCGCCTGCGCGCTCGCGCCCACGATGGTGGCGCTGGCGCTCGCCCGGGGCCTCCAGGGCGTCGGCGGCG GCGGGCTGATCGCCCTGGCGCAGACCATCCTGGCCGACATCATGTCGCCCAAGGAGCGGGCGCGCTACCAGGTGGTGATC GCGGGCGTGTTCGTCACGGCCTCGGTGGCGGGGCCGCTGCTCGGCGGCTTCTTCGCCCAGCACCTGCACTGGTCGCTGAT CTTCTGGATCAACCTGCCGATCGGCTGCCTCGCCTTCGCGCTCACCAACGCCAACCTGAAGCGCCTGCCGCGCCACGAGC GCCGCCACCGGCTGGACTATCCCGGCGCCGCCCTGATGGTGGCGGGCTCCGTCACCCTCCTGCTGGCCCTGAGCTGGGGC GGGGTGCGCTATCCCTGGGACTCGGCGCCGGTCCTCGCCCTCCTCGCCGGGGCGGCCGTGCTGGGGGGCGGCTTCGCGGC GCGGCTCGCCACGGCGCCGGAGCCGCTGATCCCCACGGAGGTGCTGAGGGACCGGGTGGTCTACAGCGCGACGCTGGCGG CCTGCTTCGCCATGGGCACCTTCATCGGGCTCACCATCTACGTGCCGATCTTCCTCGAAGGGGTGATCGGGCTCTCGGCG AGCGAGTCCGGCGTGGCCCTGGTGCCGCTGATGATCGGCACCGTCACGGGCGCGACCCTGTCGGGCCGGTCGATGCTGCA TTTCCGGCACTACAAGCGGGTACCACTGGCGATGATGTGCGTCAGTCTCGCCTGCTGCGCCACCATCGCCTGGCAGGGCC GGGCGCTGCCCTTCTGGCTCATGGAGGTGCTGTTCGCGCTGCTCTCCATGGGAATCGGGACGATCCTCCCGCTCTCGACC ATCTCGATCCAGAACGCCGTGGAGACGCACCAGCTCGGCATCGCCACCGCCGCGATGAACTTCTTCCGCTCCCTCGGCGG GGCGCTGATCGTGGCGGCCTTCGGGACGATCGTGCTCGGCGGCGCCGCGGGCGGGGCAGGGGGAGGGGCGCACGACGTGG AGAGCCTGATCCGCGGCGCGGACCCGGCCCAGCTCGCCCTGACTTTCCGCTACGTCTTCCTGGCCGCCTGCCTCGGCCTG CTCGGCGCCTTCACGTTCCTGGCGCTGATGGAGGAGCGGCCCCTGCGCGAGCGCACGTCGCCGAAGATGGCCGCCGAGAC GCCGGAGGCCTCCACCTGA
Upstream 100 bases:
>100_bases CCGCGACCGCGGTCCGTCCGCACACCTCCTCATGCCGCCCCAGGCCCCGTCCGCCCCGGACGGTCGGCCGGCACGGTCCG GATCAGAGGCTCTCAGACAC
Downstream 100 bases:
>100_bases CGGCCCCCGGGGTGGACTTCTGCCGATCCCGCGACGCCGGACCGGGCCGGGATCCCGTCACCGCGCACGCGGGCGGGGCC GAGACGGGAGACCGCTCCGG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MASPVAVTEVQPQTRARPAGPQAALSPGEIRAIVYGLMTAMLLAALDQTIVATAMPTIGLDLGDAANLPWIVTAYLLAST AVTPLYGKLSDIHGRRIMLLIAIATFVVGSLACALAPTMVALALARGLQGVGGGGLIALAQTILADIMSPKERARYQVVI AGVFVTASVAGPLLGGFFAQHLHWSLIFWINLPIGCLAFALTNANLKRLPRHERRHRLDYPGAALMVAGSVTLLLALSWG GVRYPWDSAPVLALLAGAAVLGGGFAARLATAPEPLIPTEVLRDRVVYSATLAACFAMGTFIGLTIYVPIFLEGVIGLSA SESGVALVPLMIGTVTGATLSGRSMLHFRHYKRVPLAMMCVSLACCATIAWQGRALPFWLMEVLFALLSMGIGTILPLST ISIQNAVETHQLGIATAAMNFFRSLGGALIVAAFGTIVLGGAAGGAGGGAHDVESLIRGADPAQLALTFRYVFLAACLGL LGAFTFLALMEERPLRERTSPKMAAETPEAST
Sequences:
>Translated_512_residues MASPVAVTEVQPQTRARPAGPQAALSPGEIRAIVYGLMTAMLLAALDQTIVATAMPTIGLDLGDAANLPWIVTAYLLAST AVTPLYGKLSDIHGRRIMLLIAIATFVVGSLACALAPTMVALALARGLQGVGGGGLIALAQTILADIMSPKERARYQVVI AGVFVTASVAGPLLGGFFAQHLHWSLIFWINLPIGCLAFALTNANLKRLPRHERRHRLDYPGAALMVAGSVTLLLALSWG GVRYPWDSAPVLALLAGAAVLGGGFAARLATAPEPLIPTEVLRDRVVYSATLAACFAMGTFIGLTIYVPIFLEGVIGLSA SESGVALVPLMIGTVTGATLSGRSMLHFRHYKRVPLAMMCVSLACCATIAWQGRALPFWLMEVLFALLSMGIGTILPLST ISIQNAVETHQLGIATAAMNFFRSLGGALIVAAFGTIVLGGAAGGAGGGAHDVESLIRGADPAQLALTFRYVFLAACLGL LGAFTFLALMEERPLRERTSPKMAAETPEAST >Mature_511_residues ASPVAVTEVQPQTRARPAGPQAALSPGEIRAIVYGLMTAMLLAALDQTIVATAMPTIGLDLGDAANLPWIVTAYLLASTA VTPLYGKLSDIHGRRIMLLIAIATFVVGSLACALAPTMVALALARGLQGVGGGGLIALAQTILADIMSPKERARYQVVIA GVFVTASVAGPLLGGFFAQHLHWSLIFWINLPIGCLAFALTNANLKRLPRHERRHRLDYPGAALMVAGSVTLLLALSWGG VRYPWDSAPVLALLAGAAVLGGGFAARLATAPEPLIPTEVLRDRVVYSATLAACFAMGTFIGLTIYVPIFLEGVIGLSAS ESGVALVPLMIGTVTGATLSGRSMLHFRHYKRVPLAMMCVSLACCATIAWQGRALPFWLMEVLFALLSMGIGTILPLSTI SIQNAVETHQLGIATAAMNFFRSLGGALIVAAFGTIVLGGAAGGAGGGAHDVESLIRGADPAQLALTFRYVFLAACLGLL GAFTFLALMEERPLRERTSPKMAAETPEAST
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=417, Percent_Identity=26.6187050359712, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788710, Length=424, Percent_Identity=25.2358490566038, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI87081983, Length=319, Percent_Identity=28.8401253918495, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788392, Length=367, Percent_Identity=28.3378746594005, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1790195, Length=377, Percent_Identity=24.4031830238727, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1790146, Length=147, Percent_Identity=29.9319727891156, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323735, Length=443, Percent_Identity=27.5395033860045, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6325455, Length=246, Percent_Identity=31.3008130081301, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322958, Length=351, Percent_Identity=29.0598290598291, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6321663, Length=351, Percent_Identity=26.7806267806268, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6319770, Length=375, Percent_Identity=26.6666666666667, Blast_Score=100, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53375; Mature: 53244
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPVAVTEVQPQTRARPAGPQAALSPGEIRAIVYGLMTAMLLAALDQTIVATAMPTIGL CCCCCEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DLGDAANLPWIVTAYLLASTAVTPLYGKLSDIHGRRIMLLIAIATFVVGSLACALAPTMV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALALARGLQGVGGGGLIALAQTILADIMSPKERARYQVVIAGVFVTASVAGPLLGGFFAQ HHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHH HLHWSLIFWINLPIGCLAFALTNANLKRLPRHERRHRLDYPGAALMVAGSVTLLLALSWG HHHHHHHHEECCCHHHHHHHHHCCCHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHEECCC GVRYPWDSAPVLALLAGAAVLGGGFAARLATAPEPLIPTEVLRDRVVYSATLAACFAMGT CEECCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FIGLTIYVPIFLEGVIGLSASESGVALVPLMIGTVTGATLSGRSMLHFRHYKRVPLAMMC HHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHH VSLACCATIAWQGRALPFWLMEVLFALLSMGIGTILPLSTISIQNAVETHQLGIATAAMN HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRSLGGALIVAAFGTIVLGGAAGGAGGGAHDVESLIRGADPAQLALTFRYVFLAACLGL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LGAFTFLALMEERPLRERTSPKMAAETPEAST HHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure ASPVAVTEVQPQTRARPAGPQAALSPGEIRAIVYGLMTAMLLAALDQTIVATAMPTIGL CCCCEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DLGDAANLPWIVTAYLLASTAVTPLYGKLSDIHGRRIMLLIAIATFVVGSLACALAPTMV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALALARGLQGVGGGGLIALAQTILADIMSPKERARYQVVIAGVFVTASVAGPLLGGFFAQ HHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHH HLHWSLIFWINLPIGCLAFALTNANLKRLPRHERRHRLDYPGAALMVAGSVTLLLALSWG HHHHHHHHEECCCHHHHHHHHHCCCHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHEECCC GVRYPWDSAPVLALLAGAAVLGGGFAARLATAPEPLIPTEVLRDRVVYSATLAACFAMGT CEECCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FIGLTIYVPIFLEGVIGLSASESGVALVPLMIGTVTGATLSGRSMLHFRHYKRVPLAMMC HHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHH VSLACCATIAWQGRALPFWLMEVLFALLSMGIGTILPLSTISIQNAVETHQLGIATAAMN HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRSLGGALIVAAFGTIVLGGAAGGAGGGAHDVESLIRGADPAQLALTFRYVFLAACLGL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LGAFTFLALMEERPLRERTSPKMAAETPEAST HHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]