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The map label for this gene is ybeY [C]

Identifier: 170747071

GI number: 170747071

Start: 684916

End: 685395

Strand: Reverse

Name: ybeY [C]

Synonym: Mrad2831_0637

Alternate gene names: 170747071

Gene position: 685395-684916 (Counterclockwise)

Preceding gene: 170747072

Following gene: 170747070

Centisome position: 11.28

GC content: 71.25

Gene sequence:

>480_bases
ATGCCCCACGAGATCGACCTCGCCGTCGAGGACGCGCGCTGGGAGACGGCGGTCGCCGACCTCGAGGCCCTCGTCACCCG
CGCCGTCGAGGCCGGGCTCGCCGTGGCTCCCGAGAAGCCGGACGGACCCGTCGAGGTCAGCGTCCTGCTGACGGACGACG
CCGCCGTCCGGGAGCTCAACCGGACCTGGCGCGGCAAGGACAAGCCGACCAACGTCCTGTCCTTCCCGGCCGCCCCGCAG
CCGCGGCATGCCGGCACCGCCGTGCCCCTCGGCGACGTGGTCCTTGCGTACGAGACCCTGGTGCGCGAGAGTGCGGAGCA
GTCGAAGCCGCTCCAGAATCACCTCGCCCACCTCCTCGTCCATGGCACCCTGCATTGTCTCGGTCAGGACCACGAGATCG
GCGAGACCGAGGCCGATGCCATGGAAGCCCTCGAGGTCGCGGCACTCGCGACCCTCGGCATCCCGGATCCCTATGCCTGA

Upstream 100 bases:

>100_bases
ACCTCGTGCGCCGGATCGTCACCGCCTACGAGCGCGCCGCCCACGGCAGCGAGGAGGCCGACCGCAATCCGAATCCCCGC
CGCCGGCCCCTGGCGTGACC

Downstream 100 bases:

>100_bases
GCGCGCGACGTCCGAGCGACCCCAGACCCGAGAGACATGAGCAACGATCGAAGTCGCGGCGCGGCCCTGGCCGCGCCCAG
TTCCGCCGAGGGCGAATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MPHEIDLAVEDARWETAVADLEALVTRAVEAGLAVAPEKPDGPVEVSVLLTDDAAVRELNRTWRGKDKPTNVLSFPAAPQ
PRHAGTAVPLGDVVLAYETLVRESAEQSKPLQNHLAHLLVHGTLHCLGQDHEIGETEADAMEALEVAALATLGIPDPYA

Sequences:

>Translated_159_residues
MPHEIDLAVEDARWETAVADLEALVTRAVEAGLAVAPEKPDGPVEVSVLLTDDAAVRELNRTWRGKDKPTNVLSFPAAPQ
PRHAGTAVPLGDVVLAYETLVRESAEQSKPLQNHLAHLLVHGTLHCLGQDHEIGETEADAMEALEVAALATLGIPDPYA
>Mature_158_residues
PHEIDLAVEDARWETAVADLEALVTRAVEAGLAVAPEKPDGPVEVSVLLTDDAAVRELNRTWRGKDKPTNVLSFPAAPQP
RHAGTAVPLGDVVLAYETLVRESAEQSKPLQNHLAHLLVHGTLHCLGQDHEIGETEADAMEALEVAALATLGIPDPYA

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

Organism=Escherichia coli, GI1786880, Length=114, Percent_Identity=49.1228070175439, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 16986; Mature: 16855

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHEIDLAVEDARWETAVADLEALVTRAVEAGLAVAPEKPDGPVEVSVLLTDDAAVRELN
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCHHHHHHH
RTWRGKDKPTNVLSFPAAPQPRHAGTAVPLGDVVLAYETLVRESAEQSKPLQNHLAHLLV
HHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HGTLHCLGQDHEIGETEADAMEALEVAALATLGIPDPYA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PHEIDLAVEDARWETAVADLEALVTRAVEAGLAVAPEKPDGPVEVSVLLTDDAAVRELN
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCHHHHHHH
RTWRGKDKPTNVLSFPAAPQPRHAGTAVPLGDVVLAYETLVRESAEQSKPLQNHLAHLLV
HHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HGTLHCLGQDHEIGETEADAMEALEVAALATLGIPDPYA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA