Click here to switch to the map view.

The map label for this gene is yycB [H]

Identifier: 170747068

GI number: 170747068

Start: 680812

End: 682029

Strand: Reverse

Name: yycB [H]

Synonym: Mrad2831_0634

Alternate gene names: 170747068

Gene position: 682029-680812 (Counterclockwise)

Preceding gene: 170747069

Following gene: 170747065

Centisome position: 11.22

GC content: 75.86

Gene sequence:

>1218_bases
GTGAGTTCGGACAGGGCGACCGCGAACCGGTTCCTGCTCGGCCTCGCGCTGATGCTGGTCGCGTTCAACCTGCGCCCGGC
GCTCAGCACGGTCGGCCCCCTGCTGGCGACGATCCGGGACGGCACGGGCCTCGGTGCCGGCGGCGCCGCCATCCTCACGA
CGCTGCCGGTCCTGTGCCTCGGCATCGCCTGCGCGCTCGCCGCCCCGCTGATCCGCCGGATCGGGCCCGACCTCGCGGTG
CTCGCCGGCTCGACGATCCTCGTCGCCGGCCTGACGCTCCGCGGTCTCGGCGGCCTCGTGCCGCTCTTCGCCGGGACGGC
GCTGGCGGCGATCGGGATCGGGCTCGACAACGTCCTGCTGCCGGCGCTGGTGAAGCGCGATTTCGCCGGCAACGGCGGTC
TGATGACCGGCCTCTACACGATGACCCTGTGCCTCGGCGCGGCCGCGGGCGCCGGCGCGTCGGTGCCGGTGGAGCACGCC
CTCGGCGGCGGCTGGCCCTCCGCCCTGGCGGTCTGGTCGCTGCCCGCGCTGGTCGCGGCCTTCGTGTGGATCCCGTTCGC
CCGCCGGACCGCCTCGACGGCCGCGCCCTCGGCCGGGCGGCTGCTCCGCAACCCGCTGGCATGGTGGGTGACGGGCTTCA
TGGGCCTGCAATCCTCGCTCGCCTACATCCTGTTCGGCTGGCTGCCGCTGCTGCTGCAGGGCCGCGGCCTGACGCCGCTC
AACGCCGGGTTGTACGCCTCGCTGGCGACGCTGGTGCAGGCGCCGGGCGCGCTGCTGGTCGCCATGCTGGCGGCCCGAGC
CCGCGACCAGCGCGCCTGGATCGTCGTGATTCCCGGCCTAACCGCCGCGGCCTTCGTCGTCCTCGCCTTCGGGGCGGACT
CCCTCCGGATCCCCGCCGCCTGCGCGCTGGGCTTCGGGATCGGCGGCTGCTTCGGGCTCGGCCTGACCTTGATCGTGCTG
CGCGCGGCGGACGCGGCCAGCGCCGCCGGCCTCTCGGCCATGGCGCAGGGCATCGGCTACACCTGCGCCGCGCTGGGGCC
GCTGGTCTTCGGTCTGGCCCACGAGGCGACCGGCGGCTGGGCCGTCCCCGGGGCCCTGTTCGTCGGCATCACCGTGGCGG
CGATCCTGATCGGCCTCGCCGCCGGGCGCGACCGGAAGGTCAGCGCGGCCGAGCCCGAGCCGCGGGATGCGGCCGCTCAG
CCGCTGCTCAGCCGCTGA

Upstream 100 bases:

>100_bases
GCATCGTCGGCGGCACGCTCTACGGCCAGTTCGGCGACGCCGCCTTCGCGCTGATGCTGGCCGCCTGCCTGGGCGGGGCC
GTGATCGCGCGGCGGCGGCC

Downstream 100 bases:

>100_bases
CGGTGCTCCAGCCGGCGAAGCCGGCCAGCGGTTCCTGATCGTAGCGCGCCATCAGGTCGGTCATCGCGGCCGGATCGGCG
AGGCGTCCCTCCGCGGCCAG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSSDRATANRFLLGLALMLVAFNLRPALSTVGPLLATIRDGTGLGAGGAAILTTLPVLCLGIACALAAPLIRRIGPDLAV
LAGSTILVAGLTLRGLGGLVPLFAGTALAAIGIGLDNVLLPALVKRDFAGNGGLMTGLYTMTLCLGAAAGAGASVPVEHA
LGGGWPSALAVWSLPALVAAFVWIPFARRTASTAAPSAGRLLRNPLAWWVTGFMGLQSSLAYILFGWLPLLLQGRGLTPL
NAGLYASLATLVQAPGALLVAMLAARARDQRAWIVVIPGLTAAAFVVLAFGADSLRIPAACALGFGIGGCFGLGLTLIVL
RAADAASAAGLSAMAQGIGYTCAALGPLVFGLAHEATGGWAVPGALFVGITVAAILIGLAAGRDRKVSAAEPEPRDAAAQ
PLLSR

Sequences:

>Translated_405_residues
MSSDRATANRFLLGLALMLVAFNLRPALSTVGPLLATIRDGTGLGAGGAAILTTLPVLCLGIACALAAPLIRRIGPDLAV
LAGSTILVAGLTLRGLGGLVPLFAGTALAAIGIGLDNVLLPALVKRDFAGNGGLMTGLYTMTLCLGAAAGAGASVPVEHA
LGGGWPSALAVWSLPALVAAFVWIPFARRTASTAAPSAGRLLRNPLAWWVTGFMGLQSSLAYILFGWLPLLLQGRGLTPL
NAGLYASLATLVQAPGALLVAMLAARARDQRAWIVVIPGLTAAAFVVLAFGADSLRIPAACALGFGIGGCFGLGLTLIVL
RAADAASAAGLSAMAQGIGYTCAALGPLVFGLAHEATGGWAVPGALFVGITVAAILIGLAAGRDRKVSAAEPEPRDAAAQ
PLLSR
>Mature_404_residues
SSDRATANRFLLGLALMLVAFNLRPALSTVGPLLATIRDGTGLGAGGAAILTTLPVLCLGIACALAAPLIRRIGPDLAVL
AGSTILVAGLTLRGLGGLVPLFAGTALAAIGIGLDNVLLPALVKRDFAGNGGLMTGLYTMTLCLGAAAGAGASVPVEHAL
GGGWPSALAVWSLPALVAAFVWIPFARRTASTAAPSAGRLLRNPLAWWVTGFMGLQSSLAYILFGWLPLLLQGRGLTPLN
AGLYASLATLVQAPGALLVAMLAARARDQRAWIVVIPGLTAAAFVVLAFGADSLRIPAACALGFGIGGCFGLGLTLIVLR
AADAASAAGLSAMAQGIGYTCAALGPLVFGLAHEATGGWAVPGALFVGITVAAILIGLAAGRDRKVSAAEPEPRDAAAQP
LLSR

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=396, Percent_Identity=37.8787878787879, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI1786536, Length=369, Percent_Identity=32.520325203252, Blast_Score=112, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40498; Mature: 40366

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDRATANRFLLGLALMLVAFNLRPALSTVGPLLATIRDGTGLGAGGAAILTTLPVLCL
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
GIACALAAPLIRRIGPDLAVLAGSTILVAGLTLRGLGGLVPLFAGTALAAIGIGLDNVLL
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
PALVKRDFAGNGGLMTGLYTMTLCLGAAAGAGASVPVEHALGGGWPSALAVWSLPALVAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
FVWIPFARRTASTAAPSAGRLLRNPLAWWVTGFMGLQSSLAYILFGWLPLLLQGRGLTPL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NAGLYASLATLVQAPGALLVAMLAARARDQRAWIVVIPGLTAAAFVVLAFGADSLRIPAA
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHH
CALGFGIGGCFGLGLTLIVLRAADAASAAGLSAMAQGIGYTCAALGPLVFGLAHEATGGW
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
AVPGALFVGITVAAILIGLAAGRDRKVSAAEPEPRDAAAQPLLSR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure 
SSDRATANRFLLGLALMLVAFNLRPALSTVGPLLATIRDGTGLGAGGAAILTTLPVLCL
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
GIACALAAPLIRRIGPDLAVLAGSTILVAGLTLRGLGGLVPLFAGTALAAIGIGLDNVLL
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
PALVKRDFAGNGGLMTGLYTMTLCLGAAAGAGASVPVEHALGGGWPSALAVWSLPALVAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
FVWIPFARRTASTAAPSAGRLLRNPLAWWVTGFMGLQSSLAYILFGWLPLLLQGRGLTPL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NAGLYASLATLVQAPGALLVAMLAARARDQRAWIVVIPGLTAAAFVVLAFGADSLRIPAA
CHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHH
CALGFGIGGCFGLGLTLIVLRAADAASAAGLSAMAQGIGYTCAALGPLVFGLAHEATGGW
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
AVPGALFVGITVAAILIGLAAGRDRKVSAAEPEPRDAAAQPLLSR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]