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The map label for this gene is abrB [H]

Identifier: 170747063

GI number: 170747063

Start: 674851

End: 675909

Strand: Reverse

Name: abrB [H]

Synonym: Mrad2831_0629

Alternate gene names: 170747063

Gene position: 675909-674851 (Counterclockwise)

Preceding gene: 170747064

Following gene: 170747062

Centisome position: 11.12

GC content: 74.5

Gene sequence:

>1059_bases
TTGCCCCCTCTCCGCACTCTCGGCCTCTGGGCCGCCCTCGCCGCCGCGTCGGCGGCCGTGTCGTACGGCCTGATGCAGGC
GCAGTTCCCGGCCGCGCTGCTGCTCGGGCCGATGATCGCGGCCATCGCCTTCGGTGTCGGCGGGTCGCGCCTGCGCGTCC
CGCGGGCCGCCTTCCAGGCCTCCCAGGCGGCGATCGGTTGCCTCGTCGCGCACGCCGTCACCGGGCAGATCGCCCAGACC
CTGCTGGAGGACGGGCCGCTCATCGTCGCCGTCGTGCTGGTCACCGTCGCGGTCAGCGGCCTCGTCGGCTGGATCCTGAC
CCGCCTGCGCGTGCTTCCCGGCACCACGGCGGCCTGGGGATCTTCCCCCGGCGGCGCCTCCGCCATGGTGGCGATGGCCG
AGGATTTCGGCGCCGATCCGCGCCTCGTCGCCTTCATGCAGTACGTGCGCGTCGCCGCCGTGGTGTTCTCGGCCTCGCTG
GCGGCCCGCTTCCTGATGGAGACGCCGGTCGCGGGCGCGTCGGCCGGTGTGGGCGAGGTCACTGGCCCGCTCTCGCTGCT
CGCGACGCTCGCGGTCGCCGTCGTGGGCGCGGGCGCGGCGCTCGCCCTGCGGGTTCCGGCGGGCGCGCAGGTCGGGCCGA
TGGTGCTCGGCAGCCTGCTCCACGCCACCGGGCTCGTGCGCATGGCGCTGCCGGTGCCGCTCCTCGAACTCGCCTACGCC
TGCATCGGCATCTACGTGGGCCTGCGCTTCACCCGGGAGACCCTGCGCCTGACCGTCACCGCCCTGCCGGGCATCCTGGC
GGCGACCTCCTCGGTCATCGCCCTCTGCGCGGCCTGGGGCTGGGGGCTGACCCTGCTGCTGCCCATCGACCTGCTGACCG
CGATCCTCGCCACGAGCCCGGGCGGGCTCGACTCGGTGGCGATCATCGCGGTCGGCTCGAAGGCGGACGTCTCCTTCGTG
CTCGCCGTCCAGACCCTGCGCCTGTTCGTGGTGCTGCTCACCGGCCCGCTGCTCGCCAAGTGGATCAGCCGGTCCGTGCC
GGAGGCCGCCATCCGATGA

Upstream 100 bases:

>100_bases
GGGGCGCCGTGCCGAAACTCTGCCGTGACAGGGCCAATATTGCGGTATAGCGCGCGCCTGACGCCTGCCGGCTGAAGCGG
GCCTCTCCCGATCGGTCGCC

Downstream 100 bases:

>100_bases
ACGCCCTGGTCCTCGCCTTCCTCAACTCCTGGCGCGGCCTGCGCCACGGCGCGCGCACCGAGCGGGCCGTGCGCCAGGAA
CTCGTGCTCCTGGCCCTGGG

Product: membrane protein AbrB duplication

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MPPLRTLGLWAALAAASAAVSYGLMQAQFPAALLLGPMIAAIAFGVGGSRLRVPRAAFQASQAAIGCLVAHAVTGQIAQT
LLEDGPLIVAVVLVTVAVSGLVGWILTRLRVLPGTTAAWGSSPGGASAMVAMAEDFGADPRLVAFMQYVRVAAVVFSASL
AARFLMETPVAGASAGVGEVTGPLSLLATLAVAVVGAGAALALRVPAGAQVGPMVLGSLLHATGLVRMALPVPLLELAYA
CIGIYVGLRFTRETLRLTVTALPGILAATSSVIALCAAWGWGLTLLLPIDLLTAILATSPGGLDSVAIIAVGSKADVSFV
LAVQTLRLFVVLLTGPLLAKWISRSVPEAAIR

Sequences:

>Translated_352_residues
MPPLRTLGLWAALAAASAAVSYGLMQAQFPAALLLGPMIAAIAFGVGGSRLRVPRAAFQASQAAIGCLVAHAVTGQIAQT
LLEDGPLIVAVVLVTVAVSGLVGWILTRLRVLPGTTAAWGSSPGGASAMVAMAEDFGADPRLVAFMQYVRVAAVVFSASL
AARFLMETPVAGASAGVGEVTGPLSLLATLAVAVVGAGAALALRVPAGAQVGPMVLGSLLHATGLVRMALPVPLLELAYA
CIGIYVGLRFTRETLRLTVTALPGILAATSSVIALCAAWGWGLTLLLPIDLLTAILATSPGGLDSVAIIAVGSKADVSFV
LAVQTLRLFVVLLTGPLLAKWISRSVPEAAIR
>Mature_351_residues
PPLRTLGLWAALAAASAAVSYGLMQAQFPAALLLGPMIAAIAFGVGGSRLRVPRAAFQASQAAIGCLVAHAVTGQIAQTL
LEDGPLIVAVVLVTVAVSGLVGWILTRLRVLPGTTAAWGSSPGGASAMVAMAEDFGADPRLVAFMQYVRVAAVVFSASLA
ARFLMETPVAGASAGVGEVTGPLSLLATLAVAVVGAGAALALRVPAGAQVGPMVLGSLLHATGLVRMALPVPLLELAYAC
IGIYVGLRFTRETLRLTVTALPGILAATSSVIALCAAWGWGLTLLLPIDLLTAILATSPGGLDSVAIIAVGSKADVSFVL
AVQTLRLFVVLLTGPLLAKWISRSVPEAAIR

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=342, Percent_Identity=46.7836257309941, Blast_Score=267, Evalue=8e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 35549; Mature: 35418

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLRTLGLWAALAAASAAVSYGLMQAQFPAALLLGPMIAAIAFGVGGSRLRVPRAAFQA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEECCHHHHHH
SQAAIGCLVAHAVTGQIAQTLLEDGPLIVAVVLVTVAVSGLVGWILTRLRVLPGTTAAWG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SSPGGASAMVAMAEDFGADPRLVAFMQYVRVAAVVFSASLAARFLMETPVAGASAGVGEV
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
TGPLSLLATLAVAVVGAGAALALRVPAGAQVGPMVLGSLLHATGLVRMALPVPLLELAYA
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
CIGIYVGLRFTRETLRLTVTALPGILAATSSVIALCAAWGWGLTLLLPIDLLTAILATSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGLDSVAIIAVGSKADVSFVLAVQTLRLFVVLLTGPLLAKWISRSVPEAAIR
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure 
PPLRTLGLWAALAAASAAVSYGLMQAQFPAALLLGPMIAAIAFGVGGSRLRVPRAAFQA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEECCHHHHHH
SQAAIGCLVAHAVTGQIAQTLLEDGPLIVAVVLVTVAVSGLVGWILTRLRVLPGTTAAWG
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SSPGGASAMVAMAEDFGADPRLVAFMQYVRVAAVVFSASLAARFLMETPVAGASAGVGEV
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
TGPLSLLATLAVAVVGAGAALALRVPAGAQVGPMVLGSLLHATGLVRMALPVPLLELAYA
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
CIGIYVGLRFTRETLRLTVTALPGILAATSSVIALCAAWGWGLTLLLPIDLLTAILATSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGLDSVAIIAVGSKADVSFVLAVQTLRLFVVLLTGPLLAKWISRSVPEAAIR
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]