Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is chvE [H]

Identifier: 170747049

GI number: 170747049

Start: 658981

End: 660054

Strand: Reverse

Name: chvE [H]

Synonym: Mrad2831_0615

Alternate gene names: 170747049

Gene position: 660054-658981 (Counterclockwise)

Preceding gene: 170747050

Following gene: 170747048

Centisome position: 10.86

GC content: 64.15

Gene sequence:

>1074_bases
ATGAACGCCAGGCAGACCGTTCTCACATACTTCCTGGGCCTGTCGCTCCTGGGAGCGTCGGCCGTGACATCGGTGCAGGC
GGCCGGCGGGGATCCGATCGGGGTCGCCATGCCGACCAAGTCGTCGCAGCGCTGGATCGACGACGGCAACAACATCGTCA
GGCTTCTGAAGGCCAAGGGCTACAAGCCGGACCTGCAATACGCCGACGACGACATCCCGACGCAGCTCGCCCAGATCGAG
AACATGCTCACCACGGGCGCGAAGATCCTGGTGATCGCTTCCATCGACGGCACGACCCTCAGCGATGTGCTGTCGAAGGC
GGGCGAGCGCGGCGTCCGGGTGATCGCCTACGACCGGCTCATCAGAGGGACGCCGCACGTCGATTACTACGCCACCTTCG
ACAACTACAAGGTCGGCGTTCAGCAGGCGACATCCATCGTCGACGCCCTCGGCCTGAAGGACGGGAAGGGCCCCTTCAAC
ATCGAGCTGTTCGGCGGCTCGCCCGACGACAATAACGCATACTTTTTCTACGACGGCGCCCTGTCGGTGCTGAAGCCCTA
CATCGACGCGAGGAAGCTCGTGGTGCGCTCGGGCCAGTTCGGCATGGACAAGGTGTCCACCCTGCGCTGGGACGCGGCGA
CCGCTCAGGCGCGGATGGATAACCTGCTCTCGGCCTATTACGGCACCGCCCATCTCGACGCCGTGCTCTCGCCCTACGAC
GGCATCTCCACGGCGATCCTCTCGTCGGTGAAGAGCGTCGGCTACGGTTCGGGCGACGTGAAGCTGCCGGTGATCAGCGG
CCAGGACGCCGAGCTGCAATCGGTCAAGTCGATCATCGCCGGAGAGCAGACGGCGACCATCTTCAAGGACACCCGGGATC
TGGCCAAGGTGGCGGTGGCGATGATCGACGCCATCGAGGCCGGCCGACAGCCCGAAGTCAACGATGTGAAGACCTACAGC
AACGGCAAGAAGGTCGTCCCCTCCTACCTGCTCACGCCGGTGATCGTCACCCAGGCCAACTGGAAGCAGGCCCTGGTCGA
TACCGGGTACTACACGCTCGACCAGCTCAAGTGA

Upstream 100 bases:

>100_bases
AGAGCAATTCGCAGTAATAAGAGCAACGCGTCGATAAAAACAAAAGTACGGACTCGCTTCAGCTCAGAACGAAGTCCAGC
TGTGAACATGAGGGGGGCTT

Downstream 100 bases:

>100_bases
TCGCAGCCGGGATGGAGCCCGGCGGCTCCGCCCGATCCCATCCCCGCGCCGCGATGGCCGGCGCGGGGGCCGAACGTGCA
GTCCGAGCTGGTAGGCGCCG

Product: multiple sugar-binding periplasmic receptor ChvE

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKGYKPDLQYADDDIPTQLAQIE
NMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRLIRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFN
IELFGGSPDDNNAYFFYDGALSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD
GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVAMIDAIEAGRQPEVNDVKTYS
NGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK

Sequences:

>Translated_357_residues
MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKGYKPDLQYADDDIPTQLAQIE
NMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRLIRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFN
IELFGGSPDDNNAYFFYDGALSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD
GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVAMIDAIEAGRQPEVNDVKTYS
NGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK
>Mature_357_residues
MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKGYKPDLQYADDDIPTQLAQIE
NMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRLIRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFN
IELFGGSPDDNNAYFFYDGALSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD
GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVAMIDAIEAGRQPEVNDVKTYS
NGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK

Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=324, Percent_Identity=36.1111111111111, Blast_Score=175, Evalue=4e-45,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38396; Mature: 38396

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCEEHHHHHCC
YKPDLQYADDDIPTQLAQIENMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRL
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEHHH
IRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFNIELFGGSPDDNNAYFFYDGA
HCCCCCCEEEEECCCCEECHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCH
LSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD
HHHHHHHHHHHHHHHCCCCCCCCHHHHEEECHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVA
CHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MIDAIEAGRQPEVNDVKTYSNGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCHHHHHHHCCCEECCCCC
>Mature Secondary Structure
MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCEEHHHHHCC
YKPDLQYADDDIPTQLAQIENMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRL
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEHHH
IRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFNIELFGGSPDDNNAYFFYDGA
HCCCCCCEEEEECCCCEECHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCH
LSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD
HHHHHHHHHHHHHHHCCCCCCCCHHHHEEECHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVA
CHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MIDAIEAGRQPEVNDVKTYSNGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCHHHHHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253785; 2156804; 11743193; 11743194 [H]