| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is chvE [H]
Identifier: 170747049
GI number: 170747049
Start: 658981
End: 660054
Strand: Reverse
Name: chvE [H]
Synonym: Mrad2831_0615
Alternate gene names: 170747049
Gene position: 660054-658981 (Counterclockwise)
Preceding gene: 170747050
Following gene: 170747048
Centisome position: 10.86
GC content: 64.15
Gene sequence:
>1074_bases ATGAACGCCAGGCAGACCGTTCTCACATACTTCCTGGGCCTGTCGCTCCTGGGAGCGTCGGCCGTGACATCGGTGCAGGC GGCCGGCGGGGATCCGATCGGGGTCGCCATGCCGACCAAGTCGTCGCAGCGCTGGATCGACGACGGCAACAACATCGTCA GGCTTCTGAAGGCCAAGGGCTACAAGCCGGACCTGCAATACGCCGACGACGACATCCCGACGCAGCTCGCCCAGATCGAG AACATGCTCACCACGGGCGCGAAGATCCTGGTGATCGCTTCCATCGACGGCACGACCCTCAGCGATGTGCTGTCGAAGGC GGGCGAGCGCGGCGTCCGGGTGATCGCCTACGACCGGCTCATCAGAGGGACGCCGCACGTCGATTACTACGCCACCTTCG ACAACTACAAGGTCGGCGTTCAGCAGGCGACATCCATCGTCGACGCCCTCGGCCTGAAGGACGGGAAGGGCCCCTTCAAC ATCGAGCTGTTCGGCGGCTCGCCCGACGACAATAACGCATACTTTTTCTACGACGGCGCCCTGTCGGTGCTGAAGCCCTA CATCGACGCGAGGAAGCTCGTGGTGCGCTCGGGCCAGTTCGGCATGGACAAGGTGTCCACCCTGCGCTGGGACGCGGCGA CCGCTCAGGCGCGGATGGATAACCTGCTCTCGGCCTATTACGGCACCGCCCATCTCGACGCCGTGCTCTCGCCCTACGAC GGCATCTCCACGGCGATCCTCTCGTCGGTGAAGAGCGTCGGCTACGGTTCGGGCGACGTGAAGCTGCCGGTGATCAGCGG CCAGGACGCCGAGCTGCAATCGGTCAAGTCGATCATCGCCGGAGAGCAGACGGCGACCATCTTCAAGGACACCCGGGATC TGGCCAAGGTGGCGGTGGCGATGATCGACGCCATCGAGGCCGGCCGACAGCCCGAAGTCAACGATGTGAAGACCTACAGC AACGGCAAGAAGGTCGTCCCCTCCTACCTGCTCACGCCGGTGATCGTCACCCAGGCCAACTGGAAGCAGGCCCTGGTCGA TACCGGGTACTACACGCTCGACCAGCTCAAGTGA
Upstream 100 bases:
>100_bases AGAGCAATTCGCAGTAATAAGAGCAACGCGTCGATAAAAACAAAAGTACGGACTCGCTTCAGCTCAGAACGAAGTCCAGC TGTGAACATGAGGGGGGCTT
Downstream 100 bases:
>100_bases TCGCAGCCGGGATGGAGCCCGGCGGCTCCGCCCGATCCCATCCCCGCGCCGCGATGGCCGGCGCGGGGGCCGAACGTGCA GTCCGAGCTGGTAGGCGCCG
Product: multiple sugar-binding periplasmic receptor ChvE
Products: ADP; phosphate; xylose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKGYKPDLQYADDDIPTQLAQIE NMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRLIRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFN IELFGGSPDDNNAYFFYDGALSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVAMIDAIEAGRQPEVNDVKTYS NGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK
Sequences:
>Translated_357_residues MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKGYKPDLQYADDDIPTQLAQIE NMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRLIRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFN IELFGGSPDDNNAYFFYDGALSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVAMIDAIEAGRQPEVNDVKTYS NGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK >Mature_357_residues MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKGYKPDLQYADDDIPTQLAQIE NMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRLIRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFN IELFGGSPDDNNAYFFYDGALSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVAMIDAIEAGRQPEVNDVKTYS NGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK
Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i
COG id: COG4213
COG function: function code G; ABC-type xylose transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1789990, Length=324, Percent_Identity=36.1111111111111, Blast_Score=175, Evalue=4e-45,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 38396; Mature: 38396
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCEEHHHHHCC YKPDLQYADDDIPTQLAQIENMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRL CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEHHH IRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFNIELFGGSPDDNNAYFFYDGA HCCCCCCEEEEECCCCEECHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCH LSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD HHHHHHHHHHHHHHHCCCCCCCCHHHHEEECHHHHHHHHHHHHHHHHCHHHHHHHHCCCC GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVA CHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MIDAIEAGRQPEVNDVKTYSNGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCHHHHHHHCCCEECCCCC >Mature Secondary Structure MNARQTVLTYFLGLSLLGASAVTSVQAAGGDPIGVAMPTKSSQRWIDDGNNIVRLLKAKG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCEEHHHHHCC YKPDLQYADDDIPTQLAQIENMLTTGAKILVIASIDGTTLSDVLSKAGERGVRVIAYDRL CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEHHH IRGTPHVDYYATFDNYKVGVQQATSIVDALGLKDGKGPFNIELFGGSPDDNNAYFFYDGA HCCCCCCEEEEECCCCEECHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCH LSVLKPYIDARKLVVRSGQFGMDKVSTLRWDAATAQARMDNLLSAYYGTAHLDAVLSPYD HHHHHHHHHHHHHHHCCCCCCCCHHHHEEECHHHHHHHHHHHHHHHHCHHHHHHHHCCCC GISTAILSSVKSVGYGSGDVKLPVISGQDAELQSVKSIIAGEQTATIFKDTRDLAKVAVA CHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MIDAIEAGRQPEVNDVKTYSNGKKVVPSYLLTPVIVTQANWKQALVDTGYYTLDQLK HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCHHHHHHHCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; xylose [Periplasm]; H2O [C]
Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8253785; 2156804; 11743193; 11743194 [H]