Click here to switch to the map view.

The map label for this gene is xylH [H]

Identifier: 170747047

GI number: 170747047

Start: 656115

End: 657347

Strand: Reverse

Name: xylH [H]

Synonym: Mrad2831_0613

Alternate gene names: 170747047

Gene position: 657347-656115 (Counterclockwise)

Preceding gene: 170747048

Following gene: 170747045

Centisome position: 10.82

GC content: 68.78

Gene sequence:

>1233_bases
ATGACCGACATCACAGCGAGCAAATCCATGAGGCCCGGCAGCGACATCATCCCGGCCGCCGCGGCCGCGACGGGGGAGGT
CCGGGCCCGGCGCGGCCGCCTGCCGGTGGCGCAGCTGCGCGCCTACGGGCTCGTCGTCGCACTGGCGGTGATCACGCTGT
TCTTCGAGGTCGCGACGGGCGGCGTCCTGTTCCAGCCGCTGAACCTGACCAACCTGATTCTCCAGAACAGCTACGTCGTG
GTGATGGCGCTCGGGATGCTGCTGGTCATCGTGGCCGGGCATATCGACCTGTCGGTCGGCTCGGTGGTCGGTTTCGTGGG
GGCGCTCGCCGCCCTGCTGATGGTCCGCTTCCACGTCGACCCGTTCTCGGCCGCCCTCCTGTGCCTCGCGGTGGGCGCGG
TGATCGGCGGTCTGCAGGGCTACTTCGTGGCCTACCTCGCCATCCCGAGCTTCATCGTCACCCTGGCCGGCATGATGGTG
TTCCGCGGCCTGACGCAGGTGCTGCTCCAGGGCACCTCCGTCGGGCCGTTCCCGGAGGTGTTCCAGCTCCTCGCCAAGGG
CTTCCTCGTCAATGTCGCCGGACCCTGGACCTCCGTCCTGATCGCCCTCGCGCTGGTCGCGACGCTGATCGGGCTCGGCT
GGCGAAGGCGGCAGGCGCGGCTGCGGAACGGGAGCCCGGCGGACTCCGTGGCGGCGTTCATCGGCCGCAACGGCGTGACC
GCCATCCTGATCCTGGCCTTCGCCTGGCAGATGAGCGCCTACCGGGGCCTGCCCAACGTGCTCCTCGTGCTGCTGGCGCT
GGTGACGCTCTACGGCTTCGTGACGACGCGGACGACGATCGGGCGCCGGATCTACGCGCTGGGCGGGAACATCAAGGCCG
CGCGCCTCTCTGGCATCAAGACCGAGAGGCTGACCTTCCTGACCTTCGCCAACATGGGCGCGCTGGCGGGTCTCGCCGGC
ATGATCTTCGTCGCGCGGCTCAACACCGCGAATTCCAAGGCCGGCGTCGGCATGGAGCTCGACGTGATCGCCGCCTGCTT
CATCGGCGGCGCCTCGGCGGCGGGCGGCATCGGCAAGGTCTCGGGTGTCGTGATCGGCGCCTTCATCATCGGCATCATGA
ACAACGGCATGTCGATCCTGGGGATCGGCGTCGACTGGCAGCAGGTGATCAAGGGCGTCGTCCTGCTCGCCGCCGTGTGC
CTCGACGTCCACAACAAGAACAACCGGCTCTGA

Upstream 100 bases:

>100_bases
ACGTGATGAACGAGGGGCGGTTCGTGGGCGCGTTCGATCGCGGCGAGGCCAGCCAGGAAGCGATCATGCGCGCGATCATG
CGCTCCAGGGGCCTGAACGG

Downstream 100 bases:

>100_bases
CGGGCGCCGCGCGCTGCGCGGCCCCGCGTCCGGTTCGGATCGCCCCGATCGGGACGGCGCGGGTCCGCCCCGCGGAGCGC
GTCGATCCGGCGGTGTCGCG

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTDITASKSMRPGSDIIPAAAAATGEVRARRGRLPVAQLRAYGLVVALAVITLFFEVATGGVLFQPLNLTNLILQNSYVV
VMALGMLLVIVAGHIDLSVGSVVGFVGALAALLMVRFHVDPFSAALLCLAVGAVIGGLQGYFVAYLAIPSFIVTLAGMMV
FRGLTQVLLQGTSVGPFPEVFQLLAKGFLVNVAGPWTSVLIALALVATLIGLGWRRRQARLRNGSPADSVAAFIGRNGVT
AILILAFAWQMSAYRGLPNVLLVLLALVTLYGFVTTRTTIGRRIYALGGNIKAARLSGIKTERLTFLTFANMGALAGLAG
MIFVARLNTANSKAGVGMELDVIAACFIGGASAAGGIGKVSGVVIGAFIIGIMNNGMSILGIGVDWQQVIKGVVLLAAVC
LDVHNKNNRL

Sequences:

>Translated_410_residues
MTDITASKSMRPGSDIIPAAAAATGEVRARRGRLPVAQLRAYGLVVALAVITLFFEVATGGVLFQPLNLTNLILQNSYVV
VMALGMLLVIVAGHIDLSVGSVVGFVGALAALLMVRFHVDPFSAALLCLAVGAVIGGLQGYFVAYLAIPSFIVTLAGMMV
FRGLTQVLLQGTSVGPFPEVFQLLAKGFLVNVAGPWTSVLIALALVATLIGLGWRRRQARLRNGSPADSVAAFIGRNGVT
AILILAFAWQMSAYRGLPNVLLVLLALVTLYGFVTTRTTIGRRIYALGGNIKAARLSGIKTERLTFLTFANMGALAGLAG
MIFVARLNTANSKAGVGMELDVIAACFIGGASAAGGIGKVSGVVIGAFIIGIMNNGMSILGIGVDWQQVIKGVVLLAAVC
LDVHNKNNRL
>Mature_409_residues
TDITASKSMRPGSDIIPAAAAATGEVRARRGRLPVAQLRAYGLVVALAVITLFFEVATGGVLFQPLNLTNLILQNSYVVV
MALGMLLVIVAGHIDLSVGSVVGFVGALAALLMVRFHVDPFSAALLCLAVGAVIGGLQGYFVAYLAIPSFIVTLAGMMVF
RGLTQVLLQGTSVGPFPEVFQLLAKGFLVNVAGPWTSVLIALALVATLIGLGWRRRQARLRNGSPADSVAAFIGRNGVTA
ILILAFAWQMSAYRGLPNVLLVLLALVTLYGFVTTRTTIGRRIYALGGNIKAARLSGIKTERLTFLTFANMGALAGLAGM
IFVARLNTANSKAGVGMELDVIAACFIGGASAAGGIGKVSGVVIGAFIIGIMNNGMSILGIGVDWQQVIKGVVLLAAVCL
DVHNKNNRL

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=369, Percent_Identity=40.1084010840108, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1790191, Length=136, Percent_Identity=47.7941176470588, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI145693152, Length=163, Percent_Identity=37.4233128834356, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1788896, Length=371, Percent_Identity=29.9191374663073, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1790524, Length=147, Percent_Identity=43.5374149659864, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI87082395, Length=336, Percent_Identity=27.3809523809524, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1787793, Length=136, Percent_Identity=35.2941176470588, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788471, Length=146, Percent_Identity=35.6164383561644, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 42677; Mature: 42546

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDITASKSMRPGSDIIPAAAAATGEVRARRGRLPVAQLRAYGLVVALAVITLFFEVATG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GVLFQPLNLTNLILQNSYVVVMALGMLLVIVAGHIDLSVGSVVGFVGALAALLMVRFHVD
CEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PFSAALLCLAVGAVIGGLQGYFVAYLAIPSFIVTLAGMMVFRGLTQVLLQGTSVGPFPEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
FQLLAKGFLVNVAGPWTSVLIALALVATLIGLGWRRRQARLRNGSPADSVAAFIGRNGVT
HHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCCHH
AILILAFAWQMSAYRGLPNVLLVLLALVTLYGFVTTRTTIGRRIYALGGNIKAARLSGIK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEHHHHCCCC
TERLTFLTFANMGALAGLAGMIFVARLNTANSKAGVGMELDVIAACFIGGASAAGGIGKV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHH
SGVVIGAFIIGIMNNGMSILGIGVDWQQVIKGVVLLAAVCLDVHNKNNRL
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDITASKSMRPGSDIIPAAAAATGEVRARRGRLPVAQLRAYGLVVALAVITLFFEVATG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GVLFQPLNLTNLILQNSYVVVMALGMLLVIVAGHIDLSVGSVVGFVGALAALLMVRFHVD
CEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PFSAALLCLAVGAVIGGLQGYFVAYLAIPSFIVTLAGMMVFRGLTQVLLQGTSVGPFPEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
FQLLAKGFLVNVAGPWTSVLIALALVATLIGLGWRRRQARLRNGSPADSVAAFIGRNGVT
HHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCCCHH
AILILAFAWQMSAYRGLPNVLLVLLALVTLYGFVTTRTTIGRRIYALGGNIKAARLSGIK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEHHHHCCCC
TERLTFLTFANMGALAGLAGMIFVARLNTANSKAGVGMELDVIAACFIGGASAAGGIGKV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHH
SGVVIGAFIIGIMNNGMSILGIGVDWQQVIKGVVLLAAVCLDVHNKNNRL
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]