| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is lptG [H]
Identifier: 170746989
GI number: 170746989
Start: 597129
End: 598220
Strand: Reverse
Name: lptG [H]
Synonym: Mrad2831_0555
Alternate gene names: 170746989
Gene position: 598220-597129 (Counterclockwise)
Preceding gene: 170746990
Following gene: 170746988
Centisome position: 9.84
GC content: 68.86
Gene sequence:
>1092_bases ATGATGCTGATCGGCCCCACCCTCGGGCGGTACTTCGCCGCCCGCTTCCTCCGCACGGTGCTCGGCGTCTTCGTCACCGT GTTCGCGCTGGTCTACACCCTCGACTTCGTCGAGCTGCTCCGCCGCGCCGGCGAGGCCCAGGGCGCGTCCGCGGGCCTGA TGGCGCAGCTCTCGCTCTACCGCACCCCCGCGGTGGCGGAGGGCGTGCTCCCCTTCGCGGTCCTGTTCGGCTCCATGGCG GCCCTGCTCCAGCTGTCGCGCAAGCTGGAGCTGGTGGTCGCCCGCGCGGCCGGGATCTCGGCCTGGCAGTTCCTGCAGCC CGGCCTCTTCGTGGCCCTCGCCCTCGGCGCCCTGGCGGTCGGCGTCTACAACCCGGTCTCGGCGATGCTGAAGCAGCGCT CCACCGAGATCGAGGCGAAGATCTTCGCCAAATCCACCAAGGCGAGTTCGGGCAAGGACCTGTGGATCCGGCAGAAGGGC CTCGACGGCGAGGCGATCCTCCGCGCCGAGACCGCCGTCGAAGGTACGACCACCCTGGCGGGAGTATCGGTCTTCACCTT CGACGCGGCCGGGAAGTTCGCCGAGCAGCTCGTCGCGGCCCGCGCCATGCTCCACGACGGCTACTGGGAGCTCTCCGATG TGCGCGTTCTCACACCGGACGCACCGCCCGAGTCGTTCGACACGTATCTGATCGCCTCGAACCTCGACCCCGGGCAGGTC CGGCAGCGCTTCACCCCCCCGGAATCTGTGCCTTTCTGGCAACTTCCCACAACCATCGCGCGGACCGAGCGGGCCGGTTT GGACGCCACCCGCTACCGTCTCCAGTACGACGTCCTGTGGGCGCGGCCGGTGCTGTTCGTGGCCATGGTCATCGTCGCCG CAACCGTTTCCTTACGGTTCTTCCGCTTTGGTGGGGTCGGTAAACTCGTCCTCGGTGGCGTCGCGGCCGGCTTCGCTCTC TACGTGGTCCGACAGGTCATGGAGGGGCTCGGAGCGTCCGGACTCGTCGCCGCACCGGTGGCGGCCTGGTTCCCGGCCGT GGTAGGCAGTCTTCTCGGTACGCTCACGCTTCTGTACCAGGAAGACGGCTGA
Upstream 100 bases:
>100_bases TCTTCTACGGCCCCCGGGTGCGCGCGTTCAACGCCGCCCTGGCCCGCGCCGTTCGCGGGCGGTTCCGCGGTCCGCGCCTC GCGCCGGCGGCCTGATTCCG
Downstream 100 bases:
>100_bases CTTCCGCGATCCTTCGCGGGACGGGAGACGGGTGTTGAGGTTGGTGGCGGCAGACGTCACAGGGGTTGGGACGCGCGTTG CGTAAGGTCGCCGACATCCT
Product: permease YjgP/YjgQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MMLIGPTLGRYFAARFLRTVLGVFVTVFALVYTLDFVELLRRAGEAQGASAGLMAQLSLYRTPAVAEGVLPFAVLFGSMA ALLQLSRKLELVVARAAGISAWQFLQPGLFVALALGALAVGVYNPVSAMLKQRSTEIEAKIFAKSTKASSGKDLWIRQKG LDGEAILRAETAVEGTTTLAGVSVFTFDAAGKFAEQLVAARAMLHDGYWELSDVRVLTPDAPPESFDTYLIASNLDPGQV RQRFTPPESVPFWQLPTTIARTERAGLDATRYRLQYDVLWARPVLFVAMVIVAATVSLRFFRFGGVGKLVLGGVAAGFAL YVVRQVMEGLGASGLVAAPVAAWFPAVVGSLLGTLTLLYQEDG
Sequences:
>Translated_363_residues MMLIGPTLGRYFAARFLRTVLGVFVTVFALVYTLDFVELLRRAGEAQGASAGLMAQLSLYRTPAVAEGVLPFAVLFGSMA ALLQLSRKLELVVARAAGISAWQFLQPGLFVALALGALAVGVYNPVSAMLKQRSTEIEAKIFAKSTKASSGKDLWIRQKG LDGEAILRAETAVEGTTTLAGVSVFTFDAAGKFAEQLVAARAMLHDGYWELSDVRVLTPDAPPESFDTYLIASNLDPGQV RQRFTPPESVPFWQLPTTIARTERAGLDATRYRLQYDVLWARPVLFVAMVIVAATVSLRFFRFGGVGKLVLGGVAAGFAL YVVRQVMEGLGASGLVAAPVAAWFPAVVGSLLGTLTLLYQEDG >Mature_363_residues MMLIGPTLGRYFAARFLRTVLGVFVTVFALVYTLDFVELLRRAGEAQGASAGLMAQLSLYRTPAVAEGVLPFAVLFGSMA ALLQLSRKLELVVARAAGISAWQFLQPGLFVALALGALAVGVYNPVSAMLKQRSTEIEAKIFAKSTKASSGKDLWIRQKG LDGEAILRAETAVEGTTTLAGVSVFTFDAAGKFAEQLVAARAMLHDGYWELSDVRVLTPDAPPESFDTYLIASNLDPGQV RQRFTPPESVPFWQLPTTIARTERAGLDATRYRLQYDVLWARPVLFVAMVIVAATVSLRFFRFGGVGKLVLGGVAAGFAL YVVRQVMEGLGASGLVAAPVAAWFPAVVGSLLGTLTLLYQEDG
Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptF/lptG family [H]
Homologues:
Organism=Escherichia coli, GI87082400, Length=355, Percent_Identity=24.2253521126761, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 38945; Mature: 38945
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLIGPTLGRYFAARFLRTVLGVFVTVFALVYTLDFVELLRRAGEAQGASAGLMAQLSLY CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH RTPAVAEGVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGLFVALALGALAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHH GVYNPVSAMLKQRSTEIEAKIFAKSTKASSGKDLWIRQKGLDGEAILRAETAVEGTTTLA HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHEEEHHHHCCCCHHHH GVSVFTFDAAGKFAEQLVAARAMLHDGYWELSDVRVLTPDAPPESFDTYLIASNLDPGQV HEEEEEECHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCCEEEECCCCHHHH RQRFTPPESVPFWQLPTTIARTERAGLDATRYRLQYDVLWARPVLFVAMVIVAATVSLRF HHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHH FRFGGVGKLVLGGVAAGFALYVVRQVMEGLGASGLVAAPVAAWFPAVVGSLLGTLTLLYQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE EDG CCC >Mature Secondary Structure MMLIGPTLGRYFAARFLRTVLGVFVTVFALVYTLDFVELLRRAGEAQGASAGLMAQLSLY CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH RTPAVAEGVLPFAVLFGSMAALLQLSRKLELVVARAAGISAWQFLQPGLFVALALGALAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHH GVYNPVSAMLKQRSTEIEAKIFAKSTKASSGKDLWIRQKGLDGEAILRAETAVEGTTTLA HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCHHEEEHHHHCCCCHHHH GVSVFTFDAAGKFAEQLVAARAMLHDGYWELSDVRVLTPDAPPESFDTYLIASNLDPGQV HEEEEEECHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCCEEEECCCCHHHH RQRFTPPESVPFWQLPTTIARTERAGLDATRYRLQYDVLWARPVLFVAMVIVAATVSLRF HHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHH FRFGGVGKLVLGGVAAGFALYVVRQVMEGLGASGLVAAPVAAWFPAVVGSLLGTLTLLYQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE EDG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]