| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170746840
Identifier: 170746840
GI number: 170746840
Start: 444853
End: 445875
Strand: Reverse
Name: 170746840
Synonym: Mrad2831_0402
Alternate gene names: NA
Gene position: 445875-444853 (Counterclockwise)
Preceding gene: 170746841
Following gene: 170746836
Centisome position: 7.34
GC content: 69.4
Gene sequence:
>1023_bases ATGCTGTCGCGGCCTGAACATCTCCATCGCTTTCCGACCCTGACCGCGATCCGGCCTCCGCGTGCGGTGGTCGTCCTCGG CTGGATCATCGGGCTCGGAACCGTCGTCGCAGTCCTGCTCCTCCTGTACGTGCCCTGGGTGCAGACCTCGGCCGGGACCG GGCGCGTCATCGCGCCCAACCCCGCCGACCGGGTGCAGACGGTCACGGCACTGGTCCAGGGCCGGGTGGAGCATTGGTAC GTCGAGGATGGCCAGCGGGTCCGCGCCGGGGATCCCATCGCCCGCCTCGTCGACAACGACCCTTTCCTTCTCAAGCGCCT GGGCGCCGAGCGAGAGCAGATCGAGGCCGAGATCGCAGCGGCCGATCAGGCCGTGAAGGTGGCGGAGAGCCAGGTCAGCC AGACGCGCGAGGCCGCGGAGAAGGGGTTCGTGACGCGGCGCAACTTCGAGGCCGCGCAGATCCGCGTCGCGGAGCAACGG GCGAAGCTGGCCGAGTCCAAGGCCAAGCTCAGCCGGCTCGAAGTGACCTTGAACCGCCAGTCGGCGCAGCTCGTTCGCGC GCCCAGGGACGGCCGCGTTCTGCACATCAACGCCGCGGCGGCCGGCGCGCTGGTCAACGCGGGGGACACACTGGCCACCC TCGCGCCGCACGCGCCGGAACGCGTCGTTGAGCTGATGGTCGACGGGCGGGACGTCGCCCTGATCCGACCTGGGCAGAGC GTGCGCCTCGCCTTCGAGGGTTGGCCAGCCATCCAATTCAGCGGCTGGCCCTCGGTGGCGCATGGTATGTTCGACGGGCG GGTGAGGGCCATCGACCCGTCGGCCCAACCAAGCGGCCGTTTTCGCGTGCTCGTCGAGCAGGACGCCGGCAGCTCCGCGT GGCCCGACGTCGACTTCATCCCGCTCGGAGCTAAGGCGCGGGGCTGGATACGGATGGAGACCGTCTCGCTCGGCTACGAG CTGTGGCGCGTGCTCAACAACTTGCCGCTGGATTTTCCCAAGACGCCTCAAAACCCGATCTGA
Upstream 100 bases:
>100_bases CCGGTTCACGACGACCAGATCCGCCTGGGCGCCCACGGATACGGGCGCGCGGCCGGACGTGTGGACCCGCTCGACAAGAC GACGCCGACGGAGAAGCCCC
Downstream 100 bases:
>100_bases AGAGTTCAGTCACAAACCAATTCTCCGCAGACGCTCTGGAGAGCGTGCCAAGGGTCTGCTTTGTATTACTGGAGCGTAGG TGTGTGGCCGGGGCCATGCT
Product: multidrug resistance efflux pump-like protein
Products: NA
Alternate protein names: Secretion Protein HlyD; Secretion Protein HlyD Family Protein; Outer Membrane Efflux Protein; Multidrug Resistance Efflux Pump-Like Protein; HlyD Family Secretion Protein; Membrane Fusion Protein; Efflux Transporter Membrane Fusion Protein; Signal Peptide; Xin Secretion Protein; ABC Transporter Membrane Fusion Efflux Protein; RND Efflux Membrane Fusion Proteins; Secretion Protein; Biotin/Lipoyl Attachment Domain-Containing Protein; Multidrug Resistance Efflux Pump
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MLSRPEHLHRFPTLTAIRPPRAVVVLGWIIGLGTVVAVLLLLYVPWVQTSAGTGRVIAPNPADRVQTVTALVQGRVEHWY VEDGQRVRAGDPIARLVDNDPFLLKRLGAEREQIEAEIAAADQAVKVAESQVSQTREAAEKGFVTRRNFEAAQIRVAEQR AKLAESKAKLSRLEVTLNRQSAQLVRAPRDGRVLHINAAAAGALVNAGDTLATLAPHAPERVVELMVDGRDVALIRPGQS VRLAFEGWPAIQFSGWPSVAHGMFDGRVRAIDPSAQPSGRFRVLVEQDAGSSAWPDVDFIPLGAKARGWIRMETVSLGYE LWRVLNNLPLDFPKTPQNPI
Sequences:
>Translated_340_residues MLSRPEHLHRFPTLTAIRPPRAVVVLGWIIGLGTVVAVLLLLYVPWVQTSAGTGRVIAPNPADRVQTVTALVQGRVEHWY VEDGQRVRAGDPIARLVDNDPFLLKRLGAEREQIEAEIAAADQAVKVAESQVSQTREAAEKGFVTRRNFEAAQIRVAEQR AKLAESKAKLSRLEVTLNRQSAQLVRAPRDGRVLHINAAAAGALVNAGDTLATLAPHAPERVVELMVDGRDVALIRPGQS VRLAFEGWPAIQFSGWPSVAHGMFDGRVRAIDPSAQPSGRFRVLVEQDAGSSAWPDVDFIPLGAKARGWIRMETVSLGYE LWRVLNNLPLDFPKTPQNPI >Mature_340_residues MLSRPEHLHRFPTLTAIRPPRAVVVLGWIIGLGTVVAVLLLLYVPWVQTSAGTGRVIAPNPADRVQTVTALVQGRVEHWY VEDGQRVRAGDPIARLVDNDPFLLKRLGAEREQIEAEIAAADQAVKVAESQVSQTREAAEKGFVTRRNFEAAQIRVAEQR AKLAESKAKLSRLEVTLNRQSAQLVRAPRDGRVLHINAAAAGALVNAGDTLATLAPHAPERVVELMVDGRDVALIRPGQS VRLAFEGWPAIQFSGWPSVAHGMFDGRVRAIDPSAQPSGRFRVLVEQDAGSSAWPDVDFIPLGAKARGWIRMETVSLGYE LWRVLNNLPLDFPKTPQNPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37248; Mature: 37248
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRPEHLHRFPTLTAIRPPRAVVVLGWIIGLGTVVAVLLLLYVPWVQTSAGTGRVIAPN CCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC PADRVQTVTALVQGRVEHWYVEDGQRVRAGDPIARLVDNDPFLLKRLGAEREQIEAEIAA CHHHHHHHHHHHHCCHHEEEECCCCEEECCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHH ADQAVKVAESQVSQTREAAEKGFVTRRNFEAAQIRVAEQRAKLAESKAKLSRLEVTLNRQ HHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCC SAQLVRAPRDGRVLHINAAAAGALVNAGDTLATLAPHAPERVVELMVDGRDVALIRPGQS CHHHHCCCCCCCEEEEECHHCCCEEECCCCHHHCCCCCHHHHHHHHCCCCEEEEECCCCE VRLAFEGWPAIQFSGWPSVAHGMFDGRVRAIDPSAQPSGRFRVLVEQDAGSSAWPDVDFI EEEEECCCCEEEECCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEE PLGAKARGWIRMETVSLGYELWRVLNNLPLDFPKTPQNPI ECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLSRPEHLHRFPTLTAIRPPRAVVVLGWIIGLGTVVAVLLLLYVPWVQTSAGTGRVIAPN CCCCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC PADRVQTVTALVQGRVEHWYVEDGQRVRAGDPIARLVDNDPFLLKRLGAEREQIEAEIAA CHHHHHHHHHHHHCCHHEEEECCCCEEECCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHH ADQAVKVAESQVSQTREAAEKGFVTRRNFEAAQIRVAEQRAKLAESKAKLSRLEVTLNRQ HHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCC SAQLVRAPRDGRVLHINAAAAGALVNAGDTLATLAPHAPERVVELMVDGRDVALIRPGQS CHHHHCCCCCCCEEEEECHHCCCEEECCCCHHHCCCCCHHHHHHHHCCCCEEEEECCCCE VRLAFEGWPAIQFSGWPSVAHGMFDGRVRAIDPSAQPSGRFRVLVEQDAGSSAWPDVDFI EEEEECCCCEEEECCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEE PLGAKARGWIRMETVSLGYELWRVLNNLPLDFPKTPQNPI ECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA