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The map label for this gene is psd [H]

Identifier: 170746788

GI number: 170746788

Start: 374658

End: 375569

Strand: Reverse

Name: psd [H]

Synonym: Mrad2831_0342

Alternate gene names: 170746788

Gene position: 375569-374658 (Counterclockwise)

Preceding gene: 170746790

Following gene: 170746784

Centisome position: 6.18

GC content: 71.93

Gene sequence:

>912_bases
ATGATGACGGTTGCGGGATCCCGGCTGCGGACACTCCTGGCGCGGATCGGTGCGCAGGAGGATCTCAATTTTCTGCTGAC
GAACCGTCTGCCGCGCCGCCTGGCGACCCGCTTCATGGGCTGGTTCAGCCGGATCGAGCAGCCGCTGATCCGGGACCTCT
CGATCGCTACGTGGCGGCTGTTCTGCGACGTCGATCTCCGCGACGCGCGGGAGACGCACTTCCCCAGCCTTCACGCCGCC
TTCGTGCGGGCCCTGCGCTCAGGCGCCCGGCCGATCGCGGCCGACCCGACTCTGCTGACGAGCCCCAGCGACGCGATCCT
GGGGGCCCACGGCCGCATCGAGGCCGGCCGCCTGTACCAGATCAAGGGCCTGTCCTACCGACTCGCCGACCTGCTGGGCG
GGGACACAGCGCTGGCGCGGGCCCACGAGGGGGGCTGCTACGCCACCCTGCGCCTGACGGCCGGGATGTACCATCGCTTC
CACGCCCCGCACGACCTGCGCGTCGAGTCGGTGCGCCACATCTGGGGCGATACCTGGAACGTGAACCCGATTGCCCTGAA
GCGCGTCGAGGCGCTGTTCTGCAGGAACGAGCGCGCCGTCCTGCGCCTGCGCCTCGCTCCGGGCGGGCACGCGGTGACGC
TGGTGCCGGTGGCGGCCATCCTCGTTGCCGGTCTGCGCCTCGGCTTCCTGCCCGAGGGGCTCAATCTGCGCGAGACCGGG
GGACGGCGCATTCCCACCGCGGCCCGGCTCGCGAAGGGCGCCGAGATGGGCTGGTTCGAGCACGGTTCCACCATCGTGGT
ACTGGCGCCCGCCGGCTTCGAGCTCTGCCCGGGGCTCGCCGTCGGATCGATCCTCCGGGTCGGCGCGCCCCTGATGCGCC
TGCCGCAGCCTCCCGGATCGCCCGGCGGCTGA

Upstream 100 bases:

>100_bases
GCCGCCCGTGGCAGCGCGAGAACCGCGGCGGCGGTGGTGGCGGACAGGGTGATGAGGAGCGCGGACATCGCCCCGCGCCC
TACCGGAGACGGTTCACGGC

Downstream 100 bases:

>100_bases
GCGCGCCGCCTCAGGCTGCCTGAACCGCCGCGAGGAATCCCGCGACCGCGGCGTTCAGGGTCTCCGATTGCCGCGACAGG
GCGGTGGCCGCGTCCAGCGC

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MMTVAGSRLRTLLARIGAQEDLNFLLTNRLPRRLATRFMGWFSRIEQPLIRDLSIATWRLFCDVDLRDARETHFPSLHAA
FVRALRSGARPIAADPTLLTSPSDAILGAHGRIEAGRLYQIKGLSYRLADLLGGDTALARAHEGGCYATLRLTAGMYHRF
HAPHDLRVESVRHIWGDTWNVNPIALKRVEALFCRNERAVLRLRLAPGGHAVTLVPVAAILVAGLRLGFLPEGLNLRETG
GRRIPTAARLAKGAEMGWFEHGSTIVVLAPAGFELCPGLAVGSILRVGAPLMRLPQPPGSPGG

Sequences:

>Translated_303_residues
MMTVAGSRLRTLLARIGAQEDLNFLLTNRLPRRLATRFMGWFSRIEQPLIRDLSIATWRLFCDVDLRDARETHFPSLHAA
FVRALRSGARPIAADPTLLTSPSDAILGAHGRIEAGRLYQIKGLSYRLADLLGGDTALARAHEGGCYATLRLTAGMYHRF
HAPHDLRVESVRHIWGDTWNVNPIALKRVEALFCRNERAVLRLRLAPGGHAVTLVPVAAILVAGLRLGFLPEGLNLRETG
GRRIPTAARLAKGAEMGWFEHGSTIVVLAPAGFELCPGLAVGSILRVGAPLMRLPQPPGSPGG
>Mature_303_residues
MMTVAGSRLRTLLARIGAQEDLNFLLTNRLPRRLATRFMGWFSRIEQPLIRDLSIATWRLFCDVDLRDARETHFPSLHAA
FVRALRSGARPIAADPTLLTSPSDAILGAHGRIEAGRLYQIKGLSYRLADLLGGDTALARAHEGGCYATLRLTAGMYHRF
HAPHDLRVESVRHIWGDTWNVNPIALKRVEALFCRNERAVLRLRLAPGGHAVTLVPVAAILVAGLRLGFLPEGLNLRETG
GRRIPTAARLAKGAEMGWFEHGSTIVVLAPAGFELCPGLAVGSILRVGAPLMRLPQPPGSPGG

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI13489112, Length=318, Percent_Identity=26.7295597484277, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1790604, Length=279, Percent_Identity=30.8243727598566, Blast_Score=121, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI71980843, Length=274, Percent_Identity=29.5620437956204, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71980840, Length=274, Percent_Identity=29.9270072992701, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321609, Length=212, Percent_Identity=23.5849056603774, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24649526, Length=303, Percent_Identity=28.0528052805281, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24649528, Length=303, Percent_Identity=28.0528052805281, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24649524, Length=303, Percent_Identity=28.0528052805281, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR005221 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 33025; Mature: 33025

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTVAGSRLRTLLARIGAQEDLNFLLTNRLPRRLATRFMGWFSRIEQPLIRDLSIATWRL
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
FCDVDLRDARETHFPSLHAAFVRALRSGARPIAADPTLLTSPSDAILGAHGRIEAGRLYQ
EECCCHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCCCCCCCCCEEE
IKGLSYRLADLLGGDTALARAHEGGCYATLRLTAGMYHRFHAPHDLRVESVRHIWGDTWN
ECCCHHHHHHHHCCCHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCC
VNPIALKRVEALFCRNERAVLRLRLAPGGHAVTLVPVAAILVAGLRLGFLPEGLNLRETG
CCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GRRIPTAARLAKGAEMGWFEHGSTIVVLAPAGFELCPGLAVGSILRVGAPLMRLPQPPGS
CCCCCHHHHHHCCCCCCEEECCCEEEEECCCCHHHCCCHHHHHHHHHCCHHHHCCCCCCC
PGG
CCC
>Mature Secondary Structure
MMTVAGSRLRTLLARIGAQEDLNFLLTNRLPRRLATRFMGWFSRIEQPLIRDLSIATWRL
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
FCDVDLRDARETHFPSLHAAFVRALRSGARPIAADPTLLTSPSDAILGAHGRIEAGRLYQ
EECCCHHCCHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCCCCCCCCCEEE
IKGLSYRLADLLGGDTALARAHEGGCYATLRLTAGMYHRFHAPHDLRVESVRHIWGDTWN
ECCCHHHHHHHHCCCHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCC
VNPIALKRVEALFCRNERAVLRLRLAPGGHAVTLVPVAAILVAGLRLGFLPEGLNLRETG
CCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GRRIPTAARLAKGAEMGWFEHGSTIVVLAPAGFELCPGLAVGSILRVGAPLMRLPQPPGS
CCCCCHHHHHHCCCCCCEEECCCEEEEECCCCHHHCCCHHHHHHHHHCCHHHHCCCCCCC
PGG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA