| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is mocB [H]
Identifier: 170746644
GI number: 170746644
Start: 198188
End: 199144
Strand: Reverse
Name: mocB [H]
Synonym: Mrad2831_0195
Alternate gene names: 170746644
Gene position: 199144-198188 (Counterclockwise)
Preceding gene: 170746645
Following gene: 170746642
Centisome position: 3.28
GC content: 72.2
Gene sequence:
>957_bases ATGACATCCTGGACCGTGTGGGTGCGCGGCCGCTTCGCCGGCCGGTCGCTCCGAAAAGCAGCCCTCGTCCTCGTCCTCGT GGCTTGGACGCTGCCGGCCTCGGCTACCACCATCGCGATCCTGATGCCGCCGCCTGCCCTCGCCCGGCGCCTGCACGACG GCCTCGGCGAGCAGGCGCAGGCGCGCGGGGTGGCCGCCCGCTTCGCCTACGCGCCCGAAGGTGCGGGCGAGGTGCAGATC GCGCAGGTGCGGCGGTTCATCGCCGAGAAGGTCGACGCCCTCGTGGTGATGCCGGTCGACCCGACGGCCCGCGAGGAGAT CAACCGGCTGGCCCTGGAGGCGGATGTCCCGCTGGTCCTCATCGGCCAGGGCCCGCGCACGGACTGGTTTGCCGGACGCG TCACGCATGTCGTTCCGAACGACCTCGTTGCCGGGCGCCTGCAGATGCGCAAGCTCGCTCAGATGCTGGGCGGGGTCGGG CGCGTCGCGATCATCGCGGGCAGCCCCTCCGACCCCGGCTCAGTGCTCCGCCAGAGGGGCGCCGGGGAGGTGCTCTCGGT GAGCCCGGGCCTCCGTCTCGTCGCGGAGACGACCGCGGATGGAAGCCGCGCGTCGGCGCGGGCCGCCGTCGGCGGGTGGA TCGCCCGCGGCATCGGCATCGATGCGATCGCCGCCGGCAGTGACGAGATGGCGCTCGGCGCCTCCGATGCGATCGAGGCG GCCGGGATCCCGGTAGGCCAAATCCTCATCGGCGGCGCGGATGCCACTGCGGACGGCATGCAGGCGATGCAGGACAAGCG CCTCGCCGTGACGATCTACCAGGACGCCGGCACCCAGAGCCGTCGCGCGATCGACGACGCTCTGGGACTGATCCGGCGCG AGCCGGTTCCGCAATACGACTGGGTGCCGTCCGAACTCGTCACGGACCGCATGTCGACCACCCATTTCTCGCGCTAG
Upstream 100 bases:
>100_bases GCAGGACGCCGCGCGTCTCGGCGACGAGATCGCCGGCATCTTGGAGAGCCTTCGTGCGGCCTGAATTGTGTAGCGCGGCG AGCGGGACGGAACAGGCCTG
Downstream 100 bases:
>100_bases CACCGCTCCGCCCGGGCAAGCCTCGGTCGGCCCGTCGACGATTCGGTCGGCCGCCGTGCCGGTTCAGCCCATCAATGCGC CATCAGGCAGCAGAGACTGG
Product: sugar ABC transporter periplasmic sugar-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTSWTVWVRGRFAGRSLRKAALVLVLVAWTLPASATTIAILMPPPALARRLHDGLGEQAQARGVAARFAYAPEGAGEVQI AQVRRFIAEKVDALVVMPVDPTAREEINRLALEADVPLVLIGQGPRTDWFAGRVTHVVPNDLVAGRLQMRKLAQMLGGVG RVAIIAGSPSDPGSVLRQRGAGEVLSVSPGLRLVAETTADGSRASARAAVGGWIARGIGIDAIAAGSDEMALGASDAIEA AGIPVGQILIGGADATADGMQAMQDKRLAVTIYQDAGTQSRRAIDDALGLIRREPVPQYDWVPSELVTDRMSTTHFSR
Sequences:
>Translated_318_residues MTSWTVWVRGRFAGRSLRKAALVLVLVAWTLPASATTIAILMPPPALARRLHDGLGEQAQARGVAARFAYAPEGAGEVQI AQVRRFIAEKVDALVVMPVDPTAREEINRLALEADVPLVLIGQGPRTDWFAGRVTHVVPNDLVAGRLQMRKLAQMLGGVG RVAIIAGSPSDPGSVLRQRGAGEVLSVSPGLRLVAETTADGSRASARAAVGGWIARGIGIDAIAAGSDEMALGASDAIEA AGIPVGQILIGGADATADGMQAMQDKRLAVTIYQDAGTQSRRAIDDALGLIRREPVPQYDWVPSELVTDRMSTTHFSR >Mature_317_residues TSWTVWVRGRFAGRSLRKAALVLVLVAWTLPASATTIAILMPPPALARRLHDGLGEQAQARGVAARFAYAPEGAGEVQIA QVRRFIAEKVDALVVMPVDPTAREEINRLALEADVPLVLIGQGPRTDWFAGRVTHVVPNDLVAGRLQMRKLAQMLGGVGR VAIIAGSPSDPGSVLRQRGAGEVLSVSPGLRLVAETTADGSRASARAAVGGWIARGIGIDAIAAGSDEMALGASDAIEAA GIPVGQILIGGADATADGMQAMQDKRLAVTIYQDAGTQSRRAIDDALGLIRREPVPQYDWVPSELVTDRMSTTHFSR
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism. Could be involved in its high affinity transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790674, Length=213, Percent_Identity=26.7605633802817, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 33501; Mature: 33370
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSWTVWVRGRFAGRSLRKAALVLVLVAWTLPASATTIAILMPPPALARRLHDGLGEQAQ CCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHH ARGVAARFAYAPEGAGEVQIAQVRRFIAEKVDALVVMPVDPTAREEINRLALEADVPLVL HCCHHHEEEECCCCCCCEEHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHEECCCCEEE IGQGPRTDWFAGRVTHVVPNDLVAGRLQMRKLAQMLGGVGRVAIIAGSPSDPGSVLRQRG ECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCC AGEVLSVSPGLRLVAETTADGSRASARAAVGGWIARGIGIDAIAAGSDEMALGASDAIEA CCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHH AGIPVGQILIGGADATADGMQAMQDKRLAVTIYQDAGTQSRRAIDDALGLIRREPVPQYD CCCCCHHEEEECCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC WVPSELVTDRMSTTHFSR CCCHHHHHHHHHHHCCCC >Mature Secondary Structure TSWTVWVRGRFAGRSLRKAALVLVLVAWTLPASATTIAILMPPPALARRLHDGLGEQAQ CCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHH ARGVAARFAYAPEGAGEVQIAQVRRFIAEKVDALVVMPVDPTAREEINRLALEADVPLVL HCCHHHEEEECCCCCCCEEHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHEECCCCEEE IGQGPRTDWFAGRVTHVVPNDLVAGRLQMRKLAQMLGGVGRVAIIAGSPSDPGSVLRQRG ECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCC AGEVLSVSPGLRLVAETTADGSRASARAAVGGWIARGIGIDAIAAGSDEMALGASDAIEA CCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHH AGIPVGQILIGGADATADGMQAMQDKRLAVTIYQDAGTQSRRAIDDALGLIRREPVPQYD CCCCCHHEEEECCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC WVPSELVTDRMSTTHFSR CCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]