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The map label for this gene is ytfH [H]

Identifier: 170746613

GI number: 170746613

Start: 161323

End: 161757

Strand: Reverse

Name: ytfH [H]

Synonym: Mrad2831_0163

Alternate gene names: 170746613

Gene position: 161757-161323 (Counterclockwise)

Preceding gene: 170746615

Following gene: 170746610

Centisome position: 2.66

GC content: 72.41

Gene sequence:

>435_bases
TTGGGACCAGGTTACGCGAAGGAGACCGCGCTGCCGCCCGCCCGCGCCGAGCTGGCGGCCAAGTACGCGGTGTGGCAGGC
CGGCACCCTCGATCCGGCGGCGTGCCCGGTCCGGGACGTGCTGGATCGGGTGGGCGACAAGTGGTCGATGCTACTCCTGA
TCGCCCTGGCCGACGGGCCGCTCCGGTTCAGCGCCCTGCTCCGCACGCTGCCCGACATCTCCAAGCGGATGCTGACGCAG
ACGCTCCGGGATCTCGAGCGAGACGGATTCGTGGCACGGACGGTGTTCCCGACGAAGCCGCCCAGCGTCGAGTACCGGCT
CACGGACCTCGGGGTCGCCCTGCTCGAGCCGCTGGCGCGCCTCGTCCGATGGGCCGAGGAGAGCCACGGCGCGATCCAGG
CGGCGCGGACCCGGTTCGACGCCGCGCCTTCCTAG

Upstream 100 bases:

>100_bases
TAGCTCGGATAATCGGTCCGCGTCATGCCTGTCTCCCATGGTTCAATCTCGGGACATGGTCACTAGATGAGACCACTTGG
GCGGTGAAGGAGGCAGGATT

Downstream 100 bases:

>100_bases
GACAGGCGCTCACGGCCTGTCTCTAATTCATGGGGACGTCGGTCCTCGCGAGGCACGTCCGGGCGCCGCGGATCAGGCCC
GCGGCGCCGACGCGCCGAGG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MGPGYAKETALPPARAELAAKYAVWQAGTLDPAACPVRDVLDRVGDKWSMLLLIALADGPLRFSALLRTLPDISKRMLTQ
TLRDLERDGFVARTVFPTKPPSVEYRLTDLGVALLEPLARLVRWAEESHGAIQAARTRFDAAPS

Sequences:

>Translated_144_residues
MGPGYAKETALPPARAELAAKYAVWQAGTLDPAACPVRDVLDRVGDKWSMLLLIALADGPLRFSALLRTLPDISKRMLTQ
TLRDLERDGFVARTVFPTKPPSVEYRLTDLGVALLEPLARLVRWAEESHGAIQAARTRFDAAPS
>Mature_143_residues
GPGYAKETALPPARAELAAKYAVWQAGTLDPAACPVRDVLDRVGDKWSMLLLIALADGPLRFSALLRTLPDISKRMLTQT
LRDLERDGFVARTVFPTKPPSVEYRLTDLGVALLEPLARLVRWAEESHGAIQAARTRFDAAPS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=101, Percent_Identity=44.5544554455446, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 15781; Mature: 15650

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPGYAKETALPPARAELAAKYAVWQAGTLDPAACPVRDVLDRVGDKWSMLLLIALADGP
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCC
LRFSALLRTLPDISKRMLTQTLRDLERDGFVARTVFPTKPPSVEYRLTDLGVALLEPLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHH
LVRWAEESHGAIQAARTRFDAAPS
HHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GPGYAKETALPPARAELAAKYAVWQAGTLDPAACPVRDVLDRVGDKWSMLLLIALADGP
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCC
LRFSALLRTLPDISKRMLTQTLRDLERDGFVARTVFPTKPPSVEYRLTDLGVALLEPLAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHH
LVRWAEESHGAIQAARTRFDAAPS
HHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]