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The map label for this gene is soxC [H]

Identifier: 170746474

GI number: 170746474

Start: 26172

End: 27428

Strand: Reverse

Name: soxC [H]

Synonym: Mrad2831_0024

Alternate gene names: 170746474

Gene position: 27428-26172 (Counterclockwise)

Preceding gene: 170746475

Following gene: 170746470

Centisome position: 0.45

GC content: 72.63

Gene sequence:

>1257_bases
ATGAACATCGCCGTGGATGCGCGCGCACTCGAGCCGGAGCGCCGCCCGGGCGCCACCGGCCCCGCGAGGCCGCCCTCCCC
CGCCCACGTGATCCGTGACGACGCCGAGGCGCTGGCCGCGGCTCACCGGCTCGCGGCCGATTTCCGCGCCGGCGCCTCGG
AGCGGGACCGCCACGCCGTGCGGCCGCTGGCGGAGCTCGACGCCTTCTCGCAGAGCGGGCTCTGGTCGATCAACGTGCCG
CGAGCCTATGGCGGCCCCGAGGTCTCCTACCGGACCCTCGCGCAGGTGATCGCCATCGTGGCGGCCGCCGATCCGGCCAT
CGCGCAGATCGCCCAGAACCATCTCGGCATCCTGGCAGCCATCCGGACGGTGTCGGACGAGGCGCAGAAGCACCTGCTGT
TCGGCGAGGTGCTGCGCGGCGCGCGCTTCGGGAACGCCTTCTCGGAGCGCGGCACCAAGCGGGCCGCCGATTTCGATACC
CGCTTCACCGATCACGGCGACCACGTCGTGGTCCGGGGTCAGAAGTTCTACGCCACGGGCGCCCTCCTCGCGCATCTGGT
ACCGATCGTCGCCCTCGATGAGGAAGGGCGCGCCTGGTACGCTATCGCCGAGCGGGACGCGCCCGGGCTCACGGTGATCG
ACGACTGGTCGAGCTTCGGCCAGCGCGGGACCGCGAGCGGGACCGTGCTGATCGACGACGTGCGCGTGCCCAGGACGCAT
CTCGTGCCCGCCTGGAAGGGCTACGCGGCGCCCAGCGCCGACGGCGCCGTGTTCCAGATCATCCAGGCGGCGGTCGATGC
CGGGATCGGCCGCGAGGCCCTCGACGACACCATCGGCTTCGTCCGCGAGAAGGCCCGGCCCTGGATCGACAGCGGGCTGG
AGCGGGCCGCCGACGATCCCTACACGATCCAGGCGATCGGCGACCTGACCATCCGGCAGCACGCCGCCGAGGCGCTGCTC
GACCGGGCCGGGCTCGCCCTCGACGCGGCCGTCGCGCGGCCAGACGCCGAGACGGTCGCCGCGGCGCAGATCGCCGTCGC
CGAGGCGAAGGTGCTGACGACAGAGGTGGCCCTGGCGGCGTCGAACAAGCTGTTCGAGTTGTCGGGCACCCGCTCGACCC
TGGCGGCGGAGAATCTCGACCGTCACTGGCGGAACGCGCGCACGCACACGCTGCACGACCCGGTCCGCTGGAAATACGCG
ATCGTCGGCAACCACGCCCTCAACGGCGTGAACCCGCCGCTCCACGCCTGGAGCTGA

Upstream 100 bases:

>100_bases
GATCCCGCGGGTCCGCGCCCTCGAGGCCGCCCGCGACCGGCGTGCCGAGGCGGCCTGAGCGCCGCAGACTCGATCGAAAC
TTGCCTGACCGGAGTGAGCC

Downstream 100 bases:

>100_bases
TCGGCGGCCTACAGCACCGGCAATCCCCGCGCCTTGGCCTCCTCGCCAGGCTCGACGTGGATGGTCACCACCGCCCCGGG
GATCGTCGTCTCCAGGGCGG

Product: acyl-CoA dehydrogenase type 2

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNIAVDARALEPERRPGATGPARPPSPAHVIRDDAEALAAAHRLAADFRAGASERDRHAVRPLAELDAFSQSGLWSINVP
RAYGGPEVSYRTLAQVIAIVAAADPAIAQIAQNHLGILAAIRTVSDEAQKHLLFGEVLRGARFGNAFSERGTKRAADFDT
RFTDHGDHVVVRGQKFYATGALLAHLVPIVALDEEGRAWYAIAERDAPGLTVIDDWSSFGQRGTASGTVLIDDVRVPRTH
LVPAWKGYAAPSADGAVFQIIQAAVDAGIGREALDDTIGFVREKARPWIDSGLERAADDPYTIQAIGDLTIRQHAAEALL
DRAGLALDAAVARPDAETVAAAQIAVAEAKVLTTEVALAASNKLFELSGTRSTLAAENLDRHWRNARTHTLHDPVRWKYA
IVGNHALNGVNPPLHAWS

Sequences:

>Translated_418_residues
MNIAVDARALEPERRPGATGPARPPSPAHVIRDDAEALAAAHRLAADFRAGASERDRHAVRPLAELDAFSQSGLWSINVP
RAYGGPEVSYRTLAQVIAIVAAADPAIAQIAQNHLGILAAIRTVSDEAQKHLLFGEVLRGARFGNAFSERGTKRAADFDT
RFTDHGDHVVVRGQKFYATGALLAHLVPIVALDEEGRAWYAIAERDAPGLTVIDDWSSFGQRGTASGTVLIDDVRVPRTH
LVPAWKGYAAPSADGAVFQIIQAAVDAGIGREALDDTIGFVREKARPWIDSGLERAADDPYTIQAIGDLTIRQHAAEALL
DRAGLALDAAVARPDAETVAAAQIAVAEAKVLTTEVALAASNKLFELSGTRSTLAAENLDRHWRNARTHTLHDPVRWKYA
IVGNHALNGVNPPLHAWS
>Mature_418_residues
MNIAVDARALEPERRPGATGPARPPSPAHVIRDDAEALAAAHRLAADFRAGASERDRHAVRPLAELDAFSQSGLWSINVP
RAYGGPEVSYRTLAQVIAIVAAADPAIAQIAQNHLGILAAIRTVSDEAQKHLLFGEVLRGARFGNAFSERGTKRAADFDT
RFTDHGDHVVVRGQKFYATGALLAHLVPIVALDEEGRAWYAIAERDAPGLTVIDDWSSFGQRGTASGTVLIDDVRVPRTH
LVPAWKGYAAPSADGAVFQIIQAAVDAGIGREALDDTIGFVREKARPWIDSGLERAADDPYTIQAIGDLTIRQHAAEALL
DRAGLALDAAVARPDAETVAAAQIAVAEAKVLTTEVALAASNKLFELSGTRSTLAAENLDRHWRNARTHTLHDPVRWKYA
IVGNHALNGVNPPLHAWS

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17508101, Length=389, Percent_Identity=23.1362467866324, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356377, Length=369, Percent_Identity=22.7642276422764, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44789; Mature: 44789

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAVDARALEPERRPGATGPARPPSPAHVIRDDAEALAAAHRLAADFRAGASERDRHAV
CCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RPLAELDAFSQSGLWSINVPRAYGGPEVSYRTLAQVIAIVAAADPAIAQIAQNHLGILAA
CHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IRTVSDEAQKHLLFGEVLRGARFGNAFSERGTKRAADFDTRFTDHGDHVVVRGQKFYATG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH
ALLAHLVPIVALDEEGRAWYAIAERDAPGLTVIDDWSSFGQRGTASGTVLIDDVRVPRTH
HHHHHHHHEEEECCCCCEEEEEECCCCCCCEEEECHHHHCCCCCCCCCEEEECCCCCHHH
LVPAWKGYAAPSADGAVFQIIQAAVDAGIGREALDDTIGFVREKARPWIDSGLERAADDP
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
YTIQAIGDLTIRQHAAEALLDRAGLALDAAVARPDAETVAAAQIAVAEAKVLTTEVALAA
EEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SNKLFELSGTRSTLAAENLDRHWRNARTHTLHDPVRWKYAIVGNHALNGVNPPLHAWS
CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNIAVDARALEPERRPGATGPARPPSPAHVIRDDAEALAAAHRLAADFRAGASERDRHAV
CCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RPLAELDAFSQSGLWSINVPRAYGGPEVSYRTLAQVIAIVAAADPAIAQIAQNHLGILAA
CHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IRTVSDEAQKHLLFGEVLRGARFGNAFSERGTKRAADFDTRFTDHGDHVVVRGQKFYATG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHH
ALLAHLVPIVALDEEGRAWYAIAERDAPGLTVIDDWSSFGQRGTASGTVLIDDVRVPRTH
HHHHHHHHEEEECCCCCEEEEEECCCCCCCEEEECHHHHCCCCCCCCCEEEECCCCCHHH
LVPAWKGYAAPSADGAVFQIIQAAVDAGIGREALDDTIGFVREKARPWIDSGLERAADDP
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
YTIQAIGDLTIRQHAAEALLDRAGLALDAAVARPDAETVAAAQIAVAEAKVLTTEVALAA
EEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SNKLFELSGTRSTLAAENLDRHWRNARTHTLHDPVRWKYAIVGNHALNGVNPPLHAWS
CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]