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The map label for this gene is ycjS [H]

Identifier: 170684205

GI number: 170684205

Start: 1827962

End: 1829005

Strand: Reverse

Name: ycjS [H]

Synonym: EcSMS35_1807

Alternate gene names: 170684205

Gene position: 1829005-1827962 (Counterclockwise)

Preceding gene: 170683456

Following gene: 170682507

Centisome position: 36.09

GC content: 55.46

Gene sequence:

>1044_bases
ATGACAAGCTCTCCGCTGCGGGTCGCGATCATAGGCGCGGGCCAGGTGGCGGATAAAGTTCATGCTTCGTACTACTGCAC
CCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCTGGCAGAAAAATACGGGAATG
CATCCGTGTGGGACGATCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTT
CATTACGAACATACCCTGATGGCGCTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACA
GGCGCGGGAAATGTGCGATACCGCGCGCAAACAGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCACTCGATA
CGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCACCGCCCGCGCCCTGCGTCGCTGC
GGCGTTCCCGGCTGGGGCGTTTTTACCAATAAAGAATTGCAGGGCGGCGGGCCGCTTATTGACATCGGCATTCATATGCT
GGATGCGGCGATGTATGTACTGGGCTTTCCGGCGGTGAAAAGCGTGACCGCGCATAGCTTTCAAAAGATCGGCACACAAA
AGAGCTGCGGTCAATTTGGCGAGTGGGACCCGGCAACCTACAGCGTCGAAGATTCGCTGTTTGGCACCATTGAATTTCAT
AACGGCGGCATTCTGTGGCTTGAGACCTCATTTGCACTCAACATCCGCGAACAGTCGATTATGAATGTCAGCTTTTGTGG
TGATAAAGCCGGGGCGACGCTGTTTCCAGCACATATCTACACCGATAACAACGGTGAGTTAATGACGCTGATGCAACGGG
AAATGGCAGACGACAACCGTCATCTGCGCAGTATGGAAGCCTTTATCAACCACGTACAAGGTAAGCCCGTGATGATAGCC
GACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATT
ATGA

Upstream 100 bases:

>100_bases
GGTGTACGAAGGGCGTATCCGGGCAGAAGATCCTGCCCAGGCGTACCGTGATTCTTTGGCCTGGTTGCGTACCTGCTAAG
AGGTCTTTGTGAAAAGTGCA

Downstream 100 bases:

>100_bases
CCAGGCCAGTAACGTTAACGGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCTTCGCTGATGGCGCAGGGGAAC
GGCTATCTTGGGCTTCGCGC

Product: gfo/idh/mocA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRF
HYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKQGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRC
GVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVTAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFH
NGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNRHLRSMEAFINHVQGKPVMIA
DAEQGYIIQQLVAALYQSAETGTRVEL

Sequences:

>Translated_347_residues
MTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRF
HYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKQGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRC
GVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVTAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFH
NGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNRHLRSMEAFINHVQGKPVMIA
DAEQGYIIQQLVAALYQSAETGTRVEL
>Mature_346_residues
TSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFH
YEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKQGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCG
VPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVTAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFHN
GGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNRHLRSMEAFINHVQGKPVMIAD
AEQGYIIQQLVAALYQSAETGTRVEL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=347, Percent_Identity=99.135446685879, Blast_Score=724, Evalue=0.0,
Organism=Escherichia coli, GI87081947, Length=210, Percent_Identity=27.1428571428571, Blast_Score=79, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24581117, Length=193, Percent_Identity=27.979274611399, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24581115, Length=158, Percent_Identity=32.2784810126582, Blast_Score=71, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38255; Mature: 38124

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDP
CCCCCEEEEEEECCHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCC
QAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKQGK
CEEEEEECCCEEECCCCCCEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
VLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLI
EEEEECCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEE
DIGIHMLDAAMYVLGFPAVKSVTAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFH
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEEEEE
NGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNR
CCCEEEEEECEEEEECHHHEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCHH
HLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
TSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDP
CCCCEEEEEEECCHHHHHHHHEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCC
QAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKQGK
CEEEEEECCCEEECCCCCCEEHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
VLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLI
EEEEECCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEE
DIGIHMLDAAMYVLGFPAVKSVTAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFH
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEEEEE
NGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNR
CCCEEEEEECEEEEECHHHEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHCCCHH
HLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]