Click here to switch to the map view.

The map label for this gene is ychH

Identifier: 170683871

GI number: 170683871

Start: 1958026

End: 1958304

Strand: Reverse

Name: ychH

Synonym: EcSMS35_1937

Alternate gene names: 170683871

Gene position: 1958304-1958026 (Counterclockwise)

Preceding gene: 170682289

Following gene: 170680594

Centisome position: 38.64

GC content: 52.69

Gene sequence:

>279_bases
ATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGTGTGGGGTA
TTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTG
CCATTCTCTGGCTGGCGGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGAC
AAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAA

Upstream 100 bases:

>100_bases
TGATCACGCCCGCACATAACCCACAGGGTGTTGTCTATACTTTACACATAAGGAAGAGGGGTATTCCCTGTTACAACCCA
GAAAGTTCCGGAGGTGACAT

Downstream 100 bases:

>100_bases
CAAATACTGCAGTTTACTGACCAGTCAGTTTGCTCTGACTGGTCAATCTCGTACTTATAAATCCGCCATCGCCGCGCGAC
GATTCGGGAAGAAAGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYD
KRCRRSDNRRHS

Sequences:

>Translated_92_residues
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYD
KRCRRSDNRRHS
>Mature_92_residues
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYD
KRCRRSDNRRHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787456, Length=92, Percent_Identity=100, Blast_Score=190, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCHH_ECO57 (P0AB51)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C85700
- PIR:   F90842
- RefSeq:   NP_287451.1
- RefSeq:   NP_309737.1
- ProteinModelPortal:   P0AB51
- EnsemblBacteria:   EBESCT00000025798
- EnsemblBacteria:   EBESCT00000060289
- GeneID:   913153
- GeneID:   960455
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1976
- KEGG:   ecs:ECs1710
- GeneTree:   EBGT00050000010538
- HOGENOM:   HBG416090
- OMA:   FFAHGAV
- ProtClustDB:   PRK10692
- BioCyc:   ECOL83334:ECS1710-MONOMER
- InterPro:   IPR019698

Pfam domain/function: PF10762 DUF2583

EC number: NA

Molecular weight: Translated: 10486; Mature: 10486

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAG
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
ARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAG
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
ARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796