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The map label for this gene is yuaQ [H]

Identifier: 170683308

GI number: 170683308

Start: 1999462

End: 2001783

Strand: Reverse

Name: yuaQ [H]

Synonym: EcSMS35_1980

Alternate gene names: 170683308

Gene position: 2001783-1999462 (Counterclockwise)

Preceding gene: 170682389

Following gene: 170681171

Centisome position: 39.5

GC content: 46.99

Gene sequence:

>2322_bases
TTGCAGGGTAATAATACGATTGTCACAACGGGGGATTACTCAATTGGTTTGCTAAGTCAAACGAATGGAAACCTGAATAC
TGATACCATAATAAGAGTCAACACTGACGGTTCGGTTAACCCCCATTTATCTGACGAAGGTAATACTTTTATTGTTACTG
CGGGTAATCACGCAGTCGGCGTTCTTGCTTGTGCATCTCCCGGAAGCGCGCGTGCGTGTGTATCTTCTCTTGATGAAGAA
AGTACTGCCGATACAGGAAGTAATGAAAATAACGCCAAAGCAAAACTGGATATGGCAAAAGGGGAGATAACAACCCACGG
AACAGAAAGTTATGCCGCTTACGCTAATGGCACTGTCGTCAAGGCGGGTAGCAAGCTTGATTATACCAATGCCAGCGTTA
CATTAACCGATGTTGATATTACCACGCATGGGGACAATGCTCATGCCATCGCTGCTCGCCAGGGGACTGTTTCATTTAAC
CAGGGAGAAATTCATACAACGGGTCCTGACGCCGCGATTGCTAAAATTTATAATGGCGGCAAGGTGACGCTGAAAAATAC
ATCTGCAGTCGCGCATCAGGGGGCTGGAATTGTGCTGGAGTCTTCCATAAATGGTCAGGAAGCAACGGTAGATATTTTAT
CAGGTAGCTCACTACGGTCAGCAAATGAAATCCTCTACAATAAAAATGAGACGAGTAACGTGACCATTACGGATAGTGAG
GTATCATCGGCTGCAGATGTTTTTATTAATAATATTAAAGGTCATTTGGTCATCGATGCATCTAATTCAAAAATAACGGG
TTCAGCCAATCTTTCAACAGATGATAGCACTCATACCTATCTGTCGCTTTCAGATAATAGTACCTGGGATATTAAAACTG
ACTCAACGGTGAGCAAGCTCACGGTTGACAATAGTACGGTCTATATTTCCCGGGCAGATGGAAAGGCTTTCGAACCAACA
AGATTAACAATAACTGAAAATTACGTTGGTAATAATGGCGTATTGCATCTCAGAACTGAATTGGGTGATGATAATTCAGC
TACGGATAAAGTCGTTATTAATGGAAATACCTCTGGAACAACCCGAGTTAAAGTTACCAATGCTGGCGGCAGCGGGGCTT
ACACGTTAAATGGGATAGAGATTATCAGCGTTGAGGGGGAATCAAATGGAGAATTTATTAAGGATTCGAGGATTTTCGCC
GGTGCCTACGAATATTCATTAACCCGAGGTAATACCGAAGCGACCAATAAAAACTGGTATCTGACTAACTTCCAGGCAAC
GAGCGGCGGTGAAACAAACTCCGGAGGAAGTTCAGCGCCTACTGTTGCGCCTACCCCCGTCCTGCGCCCCGAAGCTGGAA
GTTACGTCGCCAACCTGGCAGCCGCTAACACTCTTTTTGTTATGCGTCTGAACGATCGTGCAGGTGAAACGCGCTACATC
GATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAA
CGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTTAGGGGCCGATCTGTTAACCGGTGGTTTTACCGACAGTG
ACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTCAACTCATTCCAGCGTGTCGGATTATCGTTCG
AAAGGGAGTGTCAGAGGCTATAGCGCAGGGCTGTATGCCACCTGGTTTGCCGATGACATCAGTAAAAAAGGCGCATACAT
TGACGCCTGGGCGCAATATAGCTGGTTTAAAAACTCGGTGAAAGGGGATGAGTTAGCCTATGAATCCTATAGCGCGAAAG
GCGCAACCGTCTCGCTGGAAGCGGGTTACGGCTTTGCCCTGAATAAATCCTTTGGTCTGGAAGCGGCGAAATATACGTGG
ATCTTCCAGCCACAGGCACAGGCTATCTGGATGGGCGTCGATCATAATGCGCACACGGAAGCCAATGGCTCACGTATTGA
GAATGACGCAAATAACAACTTCCAGACCCGACTTGGTTTCCGCACCTTTATTCGTACTCAGGAGAAAAACAGCGGTCCTC
ACGGTGACGACTTTGAACCTTTTGTTGAAATGAACTGGATCCATAACAGTAAAGATTTTGCTGTCTCAATGAATGGTGTG
AAAGTCGAACAAGACGGGGCGCGTAATCTGGGGGAAATTAAACTTGGCGTAAATGGCAATCTGAATCCGTCGGCCAGCGT
CTGGGGTAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAATGATGGTGGGCCTGAAATATAAGTTCT
GA

Upstream 100 bases:

>100_bases
CATTGTAACAACGGGTGGTTTATATCCTTCTGGCAATAGTCCTCTAAGCACAGTATATACAGCTAGCGCAGTCGTAAGTG
AATATGGCGGTGCAGTTATT

Downstream 100 bases:

>100_bases
TCCCGCCATTAGCTAAAAAACCGCGTCGATTTCATCGACGCGGTAACATATGAAATATTATTTTTTGCCGATAGCACGCA
TGGTGTCATCAATTGCCGTG

Product: autotransporter (AT) family porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MQGNNTIVTTGDYSIGLLSQTNGNLNTDTIIRVNTDGSVNPHLSDEGNTFIVTAGNHAVGVLACASPGSARACVSSLDEE
STADTGSNENNAKAKLDMAKGEITTHGTESYAAYANGTVVKAGSKLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFN
QGEIHTTGPDAAIAKIYNGGKVTLKNTSAVAHQGAGIVLESSINGQEATVDILSGSSLRSANEILYNKNETSNVTITDSE
VSSAADVFINNIKGHLVIDASNSKITGSANLSTDDSTHTYLSLSDNSTWDIKTDSTVSKLTVDNSTVYISRADGKAFEPT
RLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFA
GAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRS
KGSVRGYSAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTW
IFQPQAQAIWMGVDHNAHTEANGSRIENDANNNFQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
KVEQDGARNLGEIKLGVNGNLNPSASVWGNVGVQLGDNGYNDTAMMVGLKYKF

Sequences:

>Translated_773_residues
MQGNNTIVTTGDYSIGLLSQTNGNLNTDTIIRVNTDGSVNPHLSDEGNTFIVTAGNHAVGVLACASPGSARACVSSLDEE
STADTGSNENNAKAKLDMAKGEITTHGTESYAAYANGTVVKAGSKLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFN
QGEIHTTGPDAAIAKIYNGGKVTLKNTSAVAHQGAGIVLESSINGQEATVDILSGSSLRSANEILYNKNETSNVTITDSE
VSSAADVFINNIKGHLVIDASNSKITGSANLSTDDSTHTYLSLSDNSTWDIKTDSTVSKLTVDNSTVYISRADGKAFEPT
RLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFA
GAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRS
KGSVRGYSAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTW
IFQPQAQAIWMGVDHNAHTEANGSRIENDANNNFQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
KVEQDGARNLGEIKLGVNGNLNPSASVWGNVGVQLGDNGYNDTAMMVGLKYKF
>Mature_773_residues
MQGNNTIVTTGDYSIGLLSQTNGNLNTDTIIRVNTDGSVNPHLSDEGNTFIVTAGNHAVGVLACASPGSARACVSSLDEE
STADTGSNENNAKAKLDMAKGEITTHGTESYAAYANGTVVKAGSKLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFN
QGEIHTTGPDAAIAKIYNGGKVTLKNTSAVAHQGAGIVLESSINGQEATVDILSGSSLRSANEILYNKNETSNVTITDSE
VSSAADVFINNIKGHLVIDASNSKITGSANLSTDDSTHTYLSLSDNSTWDIKTDSTVSKLTVDNSTVYISRADGKAFEPT
RLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFA
GAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRS
KGSVRGYSAGLYATWFADDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTW
IFQPQAQAIWMGVDHNAHTEANGSRIENDANNNFQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
KVEQDGARNLGEIKLGVNGNLNPSASVWGNVGVQLGDNGYNDTAMMVGLKYKF

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI1788565, Length=586, Percent_Identity=28.839590443686, Blast_Score=199, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR013425
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 82576; Mature: 82576

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNNTIVTTGDYSIGLLSQTNGNLNTDTIIRVNTDGSVNPHLSDEGNTFIVTAGNHAVG
CCCCCEEEEECCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEE
VLACASPGSARACVSSLDEESTADTGSNENNAKAKLDMAKGEITTHGTESYAAYANGTVV
EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCEEEECCCEEE
KAGSKLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEIHTTGPDAAIAKIYNGG
ECCCEEEECCCEEEEEEEEEEECCCCCEEEEEECCEEEECCCEEEECCCCCEEEEEECCC
KVTLKNTSAVAHQGAGIVLESSINGQEATVDILSGSSLRSANEILYNKNETSNVTITDSE
EEEEECCHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHEECCCCCCEEEEECHH
VSSAADVFINNIKGHLVIDASNSKITGSANLSTDDSTHTYLSLSDNSTWDIKTDSTVSKL
HCHHHHHEEECCCEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCEEEE
TVDNSTVYISRADGKAFEPTRLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGT
EECCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCE
TRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYEYSLTRGNTEATNKNWY
EEEEEEECCCCCEEEECCEEEEEEECCCCCCEEECCEEEEEEEEEEEECCCCCCCCCCEE
LTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCEEEE
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCHHHHCCCCCCCCCEEEEE
MAGYARDYNSTHSSVSDYRSKGSVRGYSAGLYATWFADDISKKGAYIDAWAQYSWFKNSV
EEECCCCCCCCHHHHHHHHHCCCCCEECCCEEEEEEHHHHHCCCCEEEEEHHHHHHHCCC
KGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTE
CCCCEEEECCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC
ANGSRIENDANNNFQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
CCCCCCCCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCE
KVEQDGARNLGEIKLGVNGNLNPSASVWGNVGVQLGDNGYNDTAMMVGLKYKF
EEECCCCCCCCEEEEECCCCCCCCCEECEEEEEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MQGNNTIVTTGDYSIGLLSQTNGNLNTDTIIRVNTDGSVNPHLSDEGNTFIVTAGNHAVG
CCCCCEEEEECCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEE
VLACASPGSARACVSSLDEESTADTGSNENNAKAKLDMAKGEITTHGTESYAAYANGTVV
EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCEEEECCCEEE
KAGSKLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEIHTTGPDAAIAKIYNGG
ECCCEEEECCCEEEEEEEEEEECCCCCEEEEEECCEEEECCCEEEECCCCCEEEEEECCC
KVTLKNTSAVAHQGAGIVLESSINGQEATVDILSGSSLRSANEILYNKNETSNVTITDSE
EEEEECCHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHEECCCCCCEEEEECHH
VSSAADVFINNIKGHLVIDASNSKITGSANLSTDDSTHTYLSLSDNSTWDIKTDSTVSKL
HCHHHHHEEECCCEEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCEEEE
TVDNSTVYISRADGKAFEPTRLTITENYVGNNGVLHLRTELGDDNSATDKVVINGNTSGT
EECCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCE
TRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYEYSLTRGNTEATNKNWY
EEEEEEECCCCCEEEECCEEEEEEECCCCCCEEECCEEEEEEEEEEEECCCCCCCCCCEE
LTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCEEEE
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLTGGFTDSDSWRLGV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCHHHHCCCCCCCCCEEEEE
MAGYARDYNSTHSSVSDYRSKGSVRGYSAGLYATWFADDISKKGAYIDAWAQYSWFKNSV
EEECCCCCCCCHHHHHHHHHCCCCCEECCCEEEEEEHHHHHCCCCEEEEEHHHHHHHCCC
KGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTE
CCCCEEEECCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC
ANGSRIENDANNNFQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
CCCCCCCCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCE
KVEQDGARNLGEIKLGVNGNLNPSASVWGNVGVQLGDNGYNDTAMMVGLKYKF
EEECCCCCCCCEEEEECCCCCCCCCEECEEEEEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA