Click here to switch to the map view.

The map label for this gene is 170682510

Identifier: 170682510

GI number: 170682510

Start: 3998815

End: 3999786

Strand: Reverse

Name: 170682510

Synonym: EcSMS35_3924

Alternate gene names: NA

Gene position: 3999786-3998815 (Counterclockwise)

Preceding gene: 170679645

Following gene: 170684225

Centisome position: 78.92

GC content: 38.99

Gene sequence:

>972_bases
ATGCAGAAATTATTATTTCTTGTATTTACGCTATTTTTTATTTCGCCACATAGTCATGCGGCGGTGGATTGCTCCAGTGG
TAGAATTACTCTTGGATATGATAATACGACTACAAATTACAATACTTACAACTCTACGCAGAATGGACCCGTTGCTACAT
TAGTTGCTAATGTATCGCAGAATTTTTCGTGCGGTGGTGATTATATCGAAACAACCACTATGAAAAGGAAAAGTTATTTA
GTCTTACCTATTACCAGTGGGGGAACTTGTAGTAATGGTGTTTTAACTACTACCATTCCCGGCGTTGTCTGGCGCCTTGA
TGGATTTACCTGTTTGGGGAATGGGTTAAAGACCACTAAAGAATTAAACGGCGGTGATACCTGGTCTGGGACAGTAGGGA
AACTTATCTTAACACTGACAGATGAGTATTGGCGGCAGAATAATTCCACACGAACATTTACTTTACCGGCCCCTTCTCAA
GGAAATGTCAAGGGAACGAATGTTAATGTCGTGGTAACAGCAAATCCGGCAACCTTGACGCATAAAGTTATGCACTTAGG
TAGTTGCTCGATGGCAACAACACCAGTTAATTTGGACTTCGGGACTATATCACCCATTGAAATTAATAAAGGAGCTCTAT
ATCAATCTGTTACTGTTACCTGGAACTGCGTTAACAAAGCACTCGCAGTGAATGGTTTTAATTTACGTTTTGATCCTGAG
AATGTTGTTAATGCTAACCAAGCCACTTTTAGTGCCACTGCTACTGATGGTAAAAAACTAAATTTCCAGTTGGTTCAATA
TAATCAAGGGAAAGAAACACCTCCCCAGCTTAATAAAAGCATTCAGGTGTATGCTCCAGTAACGAATGATGTTTACAATA
CACTTAGTTTAAGAATAAAAGTATTGCCAGCATCAACTTATCCCACAGGGAAAGTATCAACGTATTTAACAATTACAGCG
ACATATATGTAA

Upstream 100 bases:

>100_bases
AACTTTCAGGAAAAGATATTTCAATTGTTTCTTTTGATGATTATGGCGTAGACCGGGAATATAAACTCTAGCCCAAACCT
TTATTATTAAGGAGAATGCT

Downstream 100 bases:

>100_bases
CTGGTGATATTTTATGGGAAAGTGGAAAATATTATTTTGCATGATTGCATTACTTTGCAATTGCTGCTATGCGTCGCGAA
CTATTTCGAATAGAGTAAAC

Product: putative fimbrial protein FanF

Products: NA

Alternate protein names: Fimbrial Subunit

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MQKLLFLVFTLFFISPHSHAAVDCSSGRITLGYDNTTTNYNTYNSTQNGPVATLVANVSQNFSCGGDYIETTTMKRKSYL
VLPITSGGTCSNGVLTTTIPGVVWRLDGFTCLGNGLKTTKELNGGDTWSGTVGKLILTLTDEYWRQNNSTRTFTLPAPSQ
GNVKGTNVNVVVTANPATLTHKVMHLGSCSMATTPVNLDFGTISPIEINKGALYQSVTVTWNCVNKALAVNGFNLRFDPE
NVVNANQATFSATATDGKKLNFQLVQYNQGKETPPQLNKSIQVYAPVTNDVYNTLSLRIKVLPASTYPTGKVSTYLTITA
TYM

Sequences:

>Translated_323_residues
MQKLLFLVFTLFFISPHSHAAVDCSSGRITLGYDNTTTNYNTYNSTQNGPVATLVANVSQNFSCGGDYIETTTMKRKSYL
VLPITSGGTCSNGVLTTTIPGVVWRLDGFTCLGNGLKTTKELNGGDTWSGTVGKLILTLTDEYWRQNNSTRTFTLPAPSQ
GNVKGTNVNVVVTANPATLTHKVMHLGSCSMATTPVNLDFGTISPIEINKGALYQSVTVTWNCVNKALAVNGFNLRFDPE
NVVNANQATFSATATDGKKLNFQLVQYNQGKETPPQLNKSIQVYAPVTNDVYNTLSLRIKVLPASTYPTGKVSTYLTITA
TYM
>Mature_323_residues
MQKLLFLVFTLFFISPHSHAAVDCSSGRITLGYDNTTTNYNTYNSTQNGPVATLVANVSQNFSCGGDYIETTTMKRKSYL
VLPITSGGTCSNGVLTTTIPGVVWRLDGFTCLGNGLKTTKELNGGDTWSGTVGKLILTLTDEYWRQNNSTRTFTLPAPSQ
GNVKGTNVNVVVTANPATLTHKVMHLGSCSMATTPVNLDFGTISPIEINKGALYQSVTVTWNCVNKALAVNGFNLRFDPE
NVVNANQATFSATATDGKKLNFQLVQYNQGKETPPQLNKSIQVYAPVTNDVYNTLSLRIKVLPASTYPTGKVSTYLTITA
TYM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34962; Mature: 34962

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLLFLVFTLFFISPHSHAAVDCSSGRITLGYDNTTTNYNTYNSTQNGPVATLVANVSQ
CHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC
NFSCGGDYIETTTMKRKSYLVLPITSGGTCSNGVLTTTIPGVVWRLDGFTCLGNGLKTTK
CCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCEEEEECCEEEECCCCCCCE
ELNGGDTWSGTVGKLILTLTDEYWRQNNSTRTFTLPAPSQGNVKGTNVNVVVTANPATLT
ECCCCCCCCCCCEEEEEEEEHHHHHCCCCEEEEEECCCCCCCEECCEEEEEEEECCHHHH
HKVMHLGSCSMATTPVNLDFGTISPIEINKGALYQSVTVTWNCVNKALAVNGFNLRFDPE
HHHHHCCCCCCEECEEECCCCCCCCEEECCCCEEEEEEEEEEECCCEEEECCEEEEECCH
NVVNANQATFSATATDGKKLNFQLVQYNQGKETPPQLNKSIQVYAPVTNDVYNTLSLRIK
HHCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCHHHCCCEEEEECCCCCCCEEEEEEEE
VLPASTYPTGKVSTYLTITATYM
EEECCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MQKLLFLVFTLFFISPHSHAAVDCSSGRITLGYDNTTTNYNTYNSTQNGPVATLVANVSQ
CHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCC
NFSCGGDYIETTTMKRKSYLVLPITSGGTCSNGVLTTTIPGVVWRLDGFTCLGNGLKTTK
CCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCEEEEECCEEEECCCCCCCE
ELNGGDTWSGTVGKLILTLTDEYWRQNNSTRTFTLPAPSQGNVKGTNVNVVVTANPATLT
ECCCCCCCCCCCEEEEEEEEHHHHHCCCCEEEEEECCCCCCCEECCEEEEEEEECCHHHH
HKVMHLGSCSMATTPVNLDFGTISPIEINKGALYQSVTVTWNCVNKALAVNGFNLRFDPE
HHHHHCCCCCCEECEEECCCCCCCCEEECCCCEEEEEEEEEEECCCEEEECCEEEEECCH
NVVNANQATFSATATDGKKLNFQLVQYNQGKETPPQLNKSIQVYAPVTNDVYNTLSLRIK
HHCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCHHHCCCEEEEECCCCCCCEEEEEEEE
VLPASTYPTGKVSTYLTITATYM
EEECCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA