Definition Escherichia coli SMS-3-5 chromosome, complete genome.
Accession NC_010498
Length 5,068,389

Click here to switch to the map view.

The map label for this gene is yciQ [H]

Identifier: 170681982

GI number: 170681982

Start: 1887771

End: 1889666

Strand: Reverse

Name: yciQ [H]

Synonym: EcSMS35_1865

Alternate gene names: 170681982

Gene position: 1889666-1887771 (Counterclockwise)

Preceding gene: 170681810

Following gene: 170682451

Centisome position: 37.28

GC content: 47.15

Gene sequence:

>1896_bases
ATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGTTGGGCTTTTTTTCTCTTCGTTGAGTTATGCGAAAAACACGGA
GATCCCTTCTTATGAAGAAGGGATCTCTCTCTTTGATGTTGAAGCCACTCTGCAACCGGATGGGGTGCTCGACATCAAAG
AAAATATTCATTTTCAGGCGCGAAATCAGCAGATTAAGCACGGATTTTATCGTGATTTACCACGACTCTGGATGCAGCCT
GATGGGGACGCTGCACTGCTGAACTATCATATTGTTGGCGTCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTG
GCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATT
ATCAGGTTAAAAATGCTTTCCTGCGTGAAGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTT
GAAATTTATAAGACCCTATTTTCACTCAAGTTGCCAGATATTGCGGGTAATCCATTTAGCGAAATCGATCTCTTTACTGG
AGAAGAGGGCGACACATATCGAAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCCGCGATCCGTTTTATCGTGAAG
ATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTGGTAATGCCCCGGCACCACAAACGACGAATATTTTCAGCCAT
CTTCTTTTACCCTCTACGTCATCGTTGTTAATTTGGTTTCCGTGTCTCTTCCTGGCGTGTGGATGGTTATATCTCTGGAA
GCGCAGGCCGCAATTTACGCCGGTAGATGTGATTGAAACCGATGTCATTCCGCCAGATTACACACCCGGCATGTTACGTC
TCGATGCGAAGCTGGTTTACGACGATAAAGGTTTTTGTGCCGATATCGTAAATCTGATTGTTAAAGGAAAAATTCATCTG
GAAGATCAGTATGACAAGAACCAGCAAATCCTGATTTGTGTTAATGAAGGCGCGACCAGAAATAATGCGGTATTACTGCC
CGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTAC
GCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTATCGACCAGATACGTTTTTGCAA
TGGGGCGGAATGGCGATATTGGCGGTCATTCTCTACGGTAACCTGAGTCCCGTAGGTTGGGCAGGAATGAGTCTGGTTGG
CGATATGTTTATTATGATCTGCTGGCTTCTTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACA
AGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCGCTGATTTGTTCAGGCGTGGCCTTTTATTCTCTCTATATC
AATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGGTTATTTTAGCGCTGTTTTCCTGACCGGTTATCTCACTGG
CATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGGCAGCAACGTTATGCCCACGGTGAAGCTATCGTTAACTATC
TTGCGCGTAAAGAGGCAGCAACACACAGTGGGCGGCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGT
TGGGCAGTCTCGGCAAACCTTGGAAAAGAATGGGCAGCACGTATCACCCCATCACTCACAGCGGCTGTTCACGCCCCGGA
AATTGCCCGTAGTGGCGTTTTGTTTTCATTACAGATGCACCTGAGCCTGGGGGCCAATACCAGTTTGTTGGGGCGAAGTT
ATTCCGGTGGTGGTGCTGGCGGCGGGGCGGGTGGCGGAGGCGGTGGTGGCTGGTAA

Upstream 100 bases:

>100_bases
GGTTATTGATCTTACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAACAAATTG
CGTTCCACGGATGGAAGACT

Downstream 100 bases:

>100_bases
TTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACG
TCGAGTCGTTTACTTAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MAGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP
DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF
EIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH
LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL
EDQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQ
WGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI
NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG
WAVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW

Sequences:

>Translated_631_residues
MAGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQP
DGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF
EIYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH
LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHL
EDQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQ
WGGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI
NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLG
WAVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW
>Mature_630_residues
AGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPD
GDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFE
IYKTLFSLKLPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSHL
LLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLE
DQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQW
GGMAILAVILYGNLSPVGWAGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYIN
VGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGW
AVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMHLSLGANTSLLGRSYSGGGAGGGAGGGGGGGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787522, Length=615, Percent_Identity=95.1219512195122, Blast_Score=1185, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018702 [H]

Pfam domain/function: PF09972 DUF2207 [H]

EC number: NA

Molecular weight: Translated: 71256; Mature: 71125

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE
RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH
RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTLFSLKLPDIAGNPFS
HCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC
EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH
CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHHH
LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE
DDKGFCADIVNLIVKGKIHLEDQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKG
CCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHHCCC
DKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQWGGMAILAVILYGNLSPVGW
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCH
AGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAA
ECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
THSGRRRKGETRKLDYALLGWAVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMH
HCCCCCCCCCCCCCCCEEEEEEHCCCCCHHHHHHCCCCHHHEECCCHHHHCCEEEEEEEE
LSLGANTSLLGRSYSGGGAGGGAGGGGGGGW
EEECCCCHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGKFRCILLLIVGLFFSSLSYAKNTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEEEEECCCCEEECCCCCEEEE
RNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQ
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEHEEEEEEECCHH
RFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTLFSLKLPDIAGNPFS
HCCCCCCEEEEEEEEEEHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC
EIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLGNAPAPQTTNIFSH
CEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCHHHHHHH
LLLPSTSSLLIWFPCLFLACGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVY
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEE
DDKGFCADIVNLIVKGKIHLEDQYDKNQQILICVNEGATRNNAVLLPAEQLLLEALFRKG
CCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHHCCC
DKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRPDTFLQWGGMAILAVILYGNLSPVGW
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCH
AGMSLVGDMFIMICWLLPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYI
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
NVGDVFFYWYMPAGYFSAVFLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAA
ECCCEEEEEECCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
THSGRRRKGETRKLDYALLGWAVSANLGKEWAARITPSLTAAVHAPEIARSGVLFSLQMH
HCCCCCCCCCCCCCCCEEEEEEHCCCCCHHHHHHCCCCHHHEECCCHHHHCCEEEEEEEE
LSLGANTSLLGRSYSGGGAGGGAGGGGGGGW
EEECCCCHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]