| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is yoaC [H]
Identifier: 170681162
GI number: 170681162
Start: 1365661
End: 1365960
Strand: Reverse
Name: yoaC [H]
Synonym: EcSMS35_1378
Alternate gene names: 170681162
Gene position: 1365960-1365661 (Counterclockwise)
Preceding gene: 170680959
Following gene: 170679636
Centisome position: 26.95
GC content: 44.67
Gene sequence:
>300_bases ATGCCTGCTGTAATAGATAAAGCCCTGGATTTCATTGGTGCCATGGATGTATCAGCACCAACACCAAGTTCGATGAATGA AAGCACGGCGAAGGGAATCTTTAAATATTTGAAAGAACTGGGAGTACCCGCGAGTGCCGCTGATATTACGGCGCGAGCTG ACCAGGAAGGCTGGAACCCGGGGTTCACGGAAAAAATGGTTGGATGGGCAAAAAAAATGGAGTCTGGTGAACGCATTGTG ATTAAAAATCCTGAATACTTTTCAACATATATGCAGGAAGAACTAAAAGCACTGGTCTAA
Upstream 100 bases:
>100_bases GTTAACTCGTGCCATATCGTTATAATCCCTTTGATATTAGATGCAAATTAAGGTCATATATAGCCTTATCGATAACATGG TTAATTTTAAGGATAAGAAT
Downstream 100 bases:
>100_bases GTTAAATTTACATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATGAAAAGCGTCCTTTTTCTCACAATCAAATAA TCATCGGCTTCTATAACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMESGERIV IKNPEYFSTYMQEELKALV
Sequences:
>Translated_99_residues MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMESGERIV IKNPEYFSTYMQEELKALV >Mature_98_residues PAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMESGERIVI KNPEYFSTYMQEELKALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510951, Length=99, Percent_Identity=97.979797979798, Blast_Score=200, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015079 [H]
Pfam domain/function: PF08986 DUF1889 [H]
EC number: NA
Molecular weight: Translated: 10848; Mature: 10716
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNP CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC GFTEKMVGWAKKMESGERIVIKNPEYFSTYMQEELKALV CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure PAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNP CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC GFTEKMVGWAKKMESGERIVIKNPEYFSTYMQEELKALV CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]