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The map label for this gene is nudL [H]

Identifier: 170680320

GI number: 170680320

Start: 1363345

End: 1363923

Strand: Reverse

Name: nudL [H]

Synonym: EcSMS35_1375

Alternate gene names: 170680320

Gene position: 1363923-1363345 (Counterclockwise)

Preceding gene: 170679636

Following gene: 170681757

Centisome position: 26.91

GC content: 54.92

Gene sequence:

>579_bases
GTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCT
AAATCATCGTCAGGCTGCCGTGTTAATCCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTC
ATCTGCGCAAACACGCTGGACAAGTGGCATTCCCTGGAGGCGCAGTCGATGACACGGACGCATCCGTTATCGCCGCTGCG
CTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCACCGTTGAAGTTATCGGCGTGCTGCCGCCCGTCGATAGCGT
CACTGGCTACCAGGTAACCCCAGTGGTCGGCATTATCCCGCCCGATCTGCCGTATCGCGCCAGTGAAGATGAAGTCTCGG
CGGTGTTTGAAATGCCGCTCGCCCAGGCATTACATCTGGGTCGTTATCATCCTTTAGATATCTACCGCCGTGGCGATTCA
CATCGGGTATGGCTGTCCTGGTACGAACAGTATTTTGTATGGGGAATGACCGCAGGCATAATTCGTGAACTGGCGCTGCA
AATTGGTGTGAAACCCTGA

Upstream 100 bases:

>100_bases
TGCGGGGGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATAAGATATTAC
GCCAACTGGAGAAGTAAGAC

Downstream 100 bases:

>100_bases
CTATACTTATCTTTACATCTACAAAACACTACTTGAGACAATCATCGCAATATTAGTTAAATCGCGGTTTTTGATTAGTT
TAATTCATGTGAATAGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAA
LREAEEEVAIPPSTVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP

Sequences:

>Translated_192_residues
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAA
LREAEEEVAIPPSTVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP
>Mature_192_residues
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAA
LREAEEEVAIPPSTVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=186, Percent_Identity=35.4838709677419, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1788115, Length=192, Percent_Identity=98.9583333333333, Blast_Score=383, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17536993, Length=117, Percent_Identity=39.3162393162393, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI18859683, Length=167, Percent_Identity=34.7305389221557, Blast_Score=80, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21494; Mature: 21494

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG
CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCC
QVAFPGGAVDDTDASVIAAALREAEEEVAIPPSTVEVIGVLPPVDSVTGYQVTPVVGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCEEEECC
PDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEHHHHHHHHHHHHHHHHH
IRELALQIGVKP
HHHHHHHHCCCC
>Mature Secondary Structure
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG
CCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCC
QVAFPGGAVDDTDASVIAAALREAEEEVAIPPSTVEVIGVLPPVDSVTGYQVTPVVGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEECCEEEECC
PDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEHHHHHHHHHHHHHHHHH
IRELALQIGVKP
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA