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The map label for this gene is yiaA [H]

Identifier: 170679941

GI number: 170679941

Start: 3953082

End: 3953519

Strand: Reverse

Name: yiaA [H]

Synonym: EcSMS35_3885

Alternate gene names: 170679941

Gene position: 3953519-3953082 (Counterclockwise)

Preceding gene: 170680413

Following gene: 170684097

Centisome position: 78.0

GC content: 41.78

Gene sequence:

>438_bases
ATGGACAACAAAATATCAACCTATTCACCGGCATTTAGTATTGTGTCATGGATAGCTCTCGTTGGTGGTATCGTTACCTA
TCTGTTAGGACTATGGAATGCAGAGATGCAGTTAAATGAAAAAGGATATTATTTTGCCGTACTGGTATTAGGACTGTTTT
CTGCGGCGTCTTATCAAAAGACCGTTCGGGACAAGTATGAAGGCATACCGACCACCTCCATTTATTATATGACTTGCCTG
ACGGTCTTTATTATCTCTGTTGCGTTATTGCTGGTAGGTCTGTGGAATGCAACGTTATTACTCAGCGAAAAAGGCTTTTA
TGGGCTGGCTTTCTTCTTAAGCTTGTTTGGTGCAGTAGCGGTGCAGAAGAATATTCGTGATGCCGGAATAAACCCACCAA
AAGAAACACAGGTTACCCAGGAAGAATACAGCGAATAA

Upstream 100 bases:

>100_bases
CATCGCCTTTTTTGTCTGCTTGTTTGGTCAAATGCGTTTGTTTCGCTCGGCATGAGCAACATAAACCTCTTACACATTCA
GGAATGAAAGGAATACTGTG

Downstream 100 bases:

>100_bases
TTCACATAAGCCCGGTCAGTCCAATGTGACCGGGCTTTTATTTAACTCACTAGTCTGTTTCTGTCGATTCGTTGTACCAG
CATAGAAAGTAACAAACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCL
TVFIISVALLLVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE

Sequences:

>Translated_145_residues
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCL
TVFIISVALLLVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE
>Mature_145_residues
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCL
TVFIISVALLLVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE

Specific function: Unknown

COG id: COG4682

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082292, Length=145, Percent_Identity=99.3103448275862, Blast_Score=293, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008024 [H]

Pfam domain/function: PF05360 YiaAB [H]

EC number: NA

Molecular weight: Translated: 16105; Mature: 16105

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHH
TVRDKYEGIPTTSIYYMTCLTVFIISVALLLVGLWNATLLLSEKGFYGLAFFLSLFGAVA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
VQKNIRDAGINPPKETQVTQEEYSE
HHHHHHHCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHH
TVRDKYEGIPTTSIYYMTCLTVFIISVALLLVGLWNATLLLSEKGFYGLAFFLSLFGAVA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
VQKNIRDAGINPPKETQVTQEEYSE
HHHHHHHCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]