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The map label for this gene is dmsB_1 [H]

Identifier: 170679927

GI number: 170679927

Start: 1600222

End: 1600839

Strand: Reverse

Name: dmsB_1 [H]

Synonym: EcSMS35_1611

Alternate gene names: 170679927

Gene position: 1600839-1600222 (Counterclockwise)

Preceding gene: 170682222

Following gene: 170680653

Centisome position: 31.58

GC content: 52.27

Gene sequence:

>618_bases
ATGACCACACAATATGGATTTTTTATCGATTCCAGCCGCTGTACTGGCTGTAAAACCTGCGAACTGGCGTGCAAAGATTT
TAAAGATCTTGGCCCGGAAGTCAGTTTCCGCCGTATTTATGAATATGCTGGCGGCGACTGGCAGGAAGATAATGGCGTCT
GGCACCAGAACGTGTTCGCTTATTATCTCTCCATCTCCTGTAACCATTGCGATGACCCCGCATGTACAAAAGTCTGCCCC
AGCGGCGCAATGCATAAGCGTGAAGATGGCTTTGTGGTGGTTGATGAAGATGTTTGTATCGGCTACCGCTACTGCCACAT
GGCTTGTCCGTACGGCGCACCACAGTACAATGCTGAAAAAGGGCACATGACGAAGTGCGATGGTTGTTATTCGCGCGTCG
CCGAGGGGAAACAACCCATATGTGTCGAATCCTGCCCGCTGCGTGCACTTGAATTCGGTCCAATTGAAGAGCTGCGCCAG
AAGCACGGCACTCTGGCTGCCGTTGCGCCACTGCCGCGCGCGCATTTCACAAAACCCAATATCGTTATCAAACCTAACGC
CAACAGCCGCCCGACCGGCGATACCACTGGTTATCTGGCTAATCCGGAGGAAGTGTAA

Upstream 100 bases:

>100_bases
AGTATCAATATTCTGACCTCTCACCGCCCTTCACCGCTGGCAAAGGGAAACCCGTCGCACAGCAATCTAGTCCAGATCGA
AAAGGTTTAAGGAGTAGCCC

Downstream 100 bases:

>100_bases
AATGGGAAATGGATGGCATGAATGGCCACTGGTTATCTTTACCGTATTGGGTCAATGCGTAGTAGGCGCGCTGATTGTTA
GCGGAATTGGCTGGTTCGCC

Product: dimethylsulfoxide reductase, B subunit

Products: NA

Alternate protein names: DMSO reductase iron-sulfur subunit [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYYLSISCNHCDDPACTKVCP
SGAMHKREDGFVVVDEDVCIGYRYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQ
KHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV

Sequences:

>Translated_205_residues
MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYYLSISCNHCDDPACTKVCP
SGAMHKREDGFVVVDEDVCIGYRYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQ
KHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV
>Mature_204_residues
TTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYYLSISCNHCDDPACTKVCPS
GAMHKREDGFVVVDEDVCIGYRYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQK
HGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV

Specific function: Electron transfer subunit of the terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787872, Length=205, Percent_Identity=99.5121951219512, Blast_Score=427, Evalue=1e-121,
Organism=Escherichia coli, GI1787122, Length=205, Percent_Identity=93.6585365853659, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI1787749, Length=166, Percent_Identity=33.7349397590361, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789370, Length=198, Percent_Identity=33.8383838383838, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI226510944, Length=152, Percent_Identity=38.1578947368421, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790326, Length=167, Percent_Identity=31.7365269461078, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787478, Length=99, Percent_Identity=43.4343434343434, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1787740, Length=101, Percent_Identity=41.5841584158416, Blast_Score=90, Evalue=9e-20,
Organism=Escherichia coli, GI2367345, Length=188, Percent_Identity=32.9787234042553, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI2367245, Length=165, Percent_Identity=32.1212121212121, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1789067, Length=166, Percent_Identity=32.5301204819277, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87082179, Length=162, Percent_Identity=30.2469135802469, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787963, Length=162, Percent_Identity=28.3950617283951, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788811, Length=153, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082180, Length=151, Percent_Identity=29.1390728476821, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014297 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 22812; Mature: 22681

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFA
CCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHCEEE
YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGYRYCHMACPYGAPQYNAEK
EEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEECCEEECEEEEEEECCCCCCCCCCCC
GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPN
CCCCCHHHHHHHHHCCCCCEEECCCCCCEECCCCHHHHHHHCCCEEEECCCCCCCCCCCC
IVIKPNANSRPTGDTTGYLANPEEV
EEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFA
CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHCEEE
YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGYRYCHMACPYGAPQYNAEK
EEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEECCEEECEEEEEEECCCCCCCCCCCC
GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPN
CCCCCHHHHHHHHHCCCCCEEECCCCCCEECCCCHHHHHHHCCCEEEECCCCCCCCCCCC
IVIKPNANSRPTGDTTGYLANPEEV
EEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 2174699; 1653010 [H]