| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077544
Identifier: 170077544
GI number: 170077544
Start: 953618
End: 955084
Strand: Reverse
Name: 170077544
Synonym: SYNPCC7002_A0922
Alternate gene names: NA
Gene position: 955084-953618 (Counterclockwise)
Preceding gene: 170077545
Following gene: 170077543
Centisome position: 31.75
GC content: 49.22
Gene sequence:
>1467_bases ATGGTTTCGACACTTTCTCCTCAAGCAACCCAATTACCCAATATTTGCGGTCAGGAGCAGGAAATTTCAGAGATTGTCAA TCATCACGAAAAAATCTTTCTCGATCGGAGTGATCTCAATCTTGATCAAGTCAAGGCTGGGTTTGCCTGTGCCCTTCATA TGCACCAACCCACCATTCCCGCCGGAACCGATGGCGCACTCATTTGCAACTTGCAGCACATGATGGAAAATCCCCACGAT GGTGATAACCACAATGCCACAGTGTTTGCTTGGTGCTACAGCCGCATGGGAGAGTTTATCCCTGAGCTAGTAGCTGCAGG CTGTAGCCCCCGGATTATGTTGGATTATTCTGGCAACCTGCTCTGGGGTCTACGGCAAATGGGCCGGGAAGATGTCCTCG ATAACCTCAAGAAAATCACCACAGATGCCCGTTATCAGCCCTATGTGGAATGGCTAGGGACTATGTGGAGCCATGCGGTG GCCCCTTCGACGCCTATCCCTGATTTAAAATTGCAAATTCAAGCCTGGCAGCATTATTTTGCAGAAATTTTTGGGGTCGA AGCCCTGAAGCGGGTTAAGGGATTTTCGCCCCCAGAAATGCACCTCCCCAATCATCCGGATACGCTATTTGAATACATTA AAGCCCTCAAGGAATGTGGTTATCGTTGGCTCTTGGTGCAAGAACATTCCGTGGAGCGTTTGGACGGTTCTGGTTTACAC CATGATGATAAATATCTCCCCAATCGCCTGGTGGTGAAAAATTCCCGGGGCGAAGAAATCAGCATTACGGCACTGATTAA AACCCAGGGGTCTGATACGAAACTGGTGGCCCAGATGCAACCTTATTACGAAGCGAAGAGTCGCGATCGCCAAGAATTAG CAGGCCAATCAGTGCCCTGTTTAGTTTCCCAGATCGCCGATGGGGAAAATGGCGGCGTGATGATGAATGAGTTTCCTGGA GGTTATCTCCCGGCTTGGCATGACATTAAAAATGACGGTAGTGTTGTCGGTTTTAATGGCACGGAATATCTTGAACTCCT AGAAGCGAAGGGTATTACCGAAGCCGATTATCCAGTGTGTCAGGCGGTGGGCCAGGCGAAGATTTGGACAAGACTGGAGG CGGAAAATCAAGGCGTTACTCCAGAAACCGTCAATCAGGCGATCGCCTATTTGAATGAACATGATCACCAATTCCATGTG GATGGCGCTTCCTGGACGAATGATCTCAGTTGGGTCAAGGGCTATGAAAATGTCCTGGAGCCGATGAATGAACTGAGTGC CAAATTCCACGAAAAATATGACCGTCTCGTGGCCGAAGACCCCAGTGTGACGAAAACAGAAGCCTATCAGCGATCTTTGT TGTATTTGCTGTTGGTAGAAACCAGTTGTTTCCGTTATTGGGGCCAGGGCACTTGGACGGACTATGCCCGGAAGCTCTAC GGTGATGGGCTTGCAAGTTTGGCTTAG
Upstream 100 bases:
>100_bases ACATTAAGACCACGACAGCACAAACGACCTTGTGGGATTGACCGTAGCGATCTTCAAGCATCGTCCCGTGATTGCGATAA AGATATATAAGGAAAAATAC
Downstream 100 bases:
>100_bases GGCTTGTACCTAGAGTGATGTGATGGCGTAACTCTTCTGGTCTTGGACTGGGGGAGTTTTTTCTTGTTGCGACTTTGGCT TATCCTGGGATACTCCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIPAGTDGALICNLQHMMENPHD GDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNLLWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAV APSTPIPDLKLQIQAWQHYFAEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPCLVSQIADGENGGVMMNEFPG GYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVCQAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHV DGASWTNDLSWVKGYENVLEPMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY GDGLASLA
Sequences:
>Translated_488_residues MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIPAGTDGALICNLQHMMENPHD GDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNLLWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAV APSTPIPDLKLQIQAWQHYFAEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPCLVSQIADGENGGVMMNEFPG GYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVCQAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHV DGASWTNDLSWVKGYENVLEPMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY GDGLASLA >Mature_488_residues MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIPAGTDGALICNLQHMMENPHD GDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNLLWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAV APSTPIPDLKLQIQAWQHYFAEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPCLVSQIADGENGGVMMNEFPG GYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVCQAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHV DGASWTNDLSWVKGYENVLEPMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY GDGLASLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55019; Mature: 55019
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIP CCCCCCCCHHHCCHHCCCHHHHHHHHHHHHHEEEECCCCCHHHHHCCCEEEEEECCCCCC AGTDGALICNLQHMMENPHDGDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNL CCCCCEEEEEHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH LWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAVAPSTPIPDLKLQIQAWQHYF HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH AEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCC HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPC CCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEHHCHHHHHHCCCHHHHCCCCCHH LVSQIADGENGGVMMNEFPGGYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVC HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHH QAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHVDGASWTNDLSWVKGYENVLE HHCCCHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH PMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GDGLASLA CCCHHHCC >Mature Secondary Structure MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIP CCCCCCCCHHHCCHHCCCHHHHHHHHHHHHHEEEECCCCCHHHHHCCCEEEEEECCCCCC AGTDGALICNLQHMMENPHDGDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNL CCCCCEEEEEHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH LWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAVAPSTPIPDLKLQIQAWQHYF HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH AEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCC HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPC CCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEHHCHHHHHHCCCHHHHCCCCCHH LVSQIADGENGGVMMNEFPGGYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVC HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHH QAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHVDGASWTNDLSWVKGYENVLE HHCCCHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH PMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GDGLASLA CCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA