Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077544

Identifier: 170077544

GI number: 170077544

Start: 953618

End: 955084

Strand: Reverse

Name: 170077544

Synonym: SYNPCC7002_A0922

Alternate gene names: NA

Gene position: 955084-953618 (Counterclockwise)

Preceding gene: 170077545

Following gene: 170077543

Centisome position: 31.75

GC content: 49.22

Gene sequence:

>1467_bases
ATGGTTTCGACACTTTCTCCTCAAGCAACCCAATTACCCAATATTTGCGGTCAGGAGCAGGAAATTTCAGAGATTGTCAA
TCATCACGAAAAAATCTTTCTCGATCGGAGTGATCTCAATCTTGATCAAGTCAAGGCTGGGTTTGCCTGTGCCCTTCATA
TGCACCAACCCACCATTCCCGCCGGAACCGATGGCGCACTCATTTGCAACTTGCAGCACATGATGGAAAATCCCCACGAT
GGTGATAACCACAATGCCACAGTGTTTGCTTGGTGCTACAGCCGCATGGGAGAGTTTATCCCTGAGCTAGTAGCTGCAGG
CTGTAGCCCCCGGATTATGTTGGATTATTCTGGCAACCTGCTCTGGGGTCTACGGCAAATGGGCCGGGAAGATGTCCTCG
ATAACCTCAAGAAAATCACCACAGATGCCCGTTATCAGCCCTATGTGGAATGGCTAGGGACTATGTGGAGCCATGCGGTG
GCCCCTTCGACGCCTATCCCTGATTTAAAATTGCAAATTCAAGCCTGGCAGCATTATTTTGCAGAAATTTTTGGGGTCGA
AGCCCTGAAGCGGGTTAAGGGATTTTCGCCCCCAGAAATGCACCTCCCCAATCATCCGGATACGCTATTTGAATACATTA
AAGCCCTCAAGGAATGTGGTTATCGTTGGCTCTTGGTGCAAGAACATTCCGTGGAGCGTTTGGACGGTTCTGGTTTACAC
CATGATGATAAATATCTCCCCAATCGCCTGGTGGTGAAAAATTCCCGGGGCGAAGAAATCAGCATTACGGCACTGATTAA
AACCCAGGGGTCTGATACGAAACTGGTGGCCCAGATGCAACCTTATTACGAAGCGAAGAGTCGCGATCGCCAAGAATTAG
CAGGCCAATCAGTGCCCTGTTTAGTTTCCCAGATCGCCGATGGGGAAAATGGCGGCGTGATGATGAATGAGTTTCCTGGA
GGTTATCTCCCGGCTTGGCATGACATTAAAAATGACGGTAGTGTTGTCGGTTTTAATGGCACGGAATATCTTGAACTCCT
AGAAGCGAAGGGTATTACCGAAGCCGATTATCCAGTGTGTCAGGCGGTGGGCCAGGCGAAGATTTGGACAAGACTGGAGG
CGGAAAATCAAGGCGTTACTCCAGAAACCGTCAATCAGGCGATCGCCTATTTGAATGAACATGATCACCAATTCCATGTG
GATGGCGCTTCCTGGACGAATGATCTCAGTTGGGTCAAGGGCTATGAAAATGTCCTGGAGCCGATGAATGAACTGAGTGC
CAAATTCCACGAAAAATATGACCGTCTCGTGGCCGAAGACCCCAGTGTGACGAAAACAGAAGCCTATCAGCGATCTTTGT
TGTATTTGCTGTTGGTAGAAACCAGTTGTTTCCGTTATTGGGGCCAGGGCACTTGGACGGACTATGCCCGGAAGCTCTAC
GGTGATGGGCTTGCAAGTTTGGCTTAG

Upstream 100 bases:

>100_bases
ACATTAAGACCACGACAGCACAAACGACCTTGTGGGATTGACCGTAGCGATCTTCAAGCATCGTCCCGTGATTGCGATAA
AGATATATAAGGAAAAATAC

Downstream 100 bases:

>100_bases
GGCTTGTACCTAGAGTGATGTGATGGCGTAACTCTTCTGGTCTTGGACTGGGGGAGTTTTTTCTTGTTGCGACTTTGGCT
TATCCTGGGATACTCCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIPAGTDGALICNLQHMMENPHD
GDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNLLWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAV
APSTPIPDLKLQIQAWQHYFAEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH
HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPCLVSQIADGENGGVMMNEFPG
GYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVCQAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHV
DGASWTNDLSWVKGYENVLEPMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY
GDGLASLA

Sequences:

>Translated_488_residues
MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIPAGTDGALICNLQHMMENPHD
GDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNLLWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAV
APSTPIPDLKLQIQAWQHYFAEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH
HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPCLVSQIADGENGGVMMNEFPG
GYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVCQAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHV
DGASWTNDLSWVKGYENVLEPMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY
GDGLASLA
>Mature_488_residues
MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIPAGTDGALICNLQHMMENPHD
GDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNLLWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAV
APSTPIPDLKLQIQAWQHYFAEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH
HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPCLVSQIADGENGGVMMNEFPG
GYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVCQAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHV
DGASWTNDLSWVKGYENVLEPMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY
GDGLASLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55019; Mature: 55019

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIP
CCCCCCCCHHHCCHHCCCHHHHHHHHHHHHHEEEECCCCCHHHHHCCCEEEEEECCCCCC
AGTDGALICNLQHMMENPHDGDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNL
CCCCCEEEEEHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH
LWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAVAPSTPIPDLKLQIQAWQHYF
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH
AEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCC
HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPC
CCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEHHCHHHHHHCCCHHHHCCCCCHH
LVSQIADGENGGVMMNEFPGGYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVC
HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHH
QAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHVDGASWTNDLSWVKGYENVLE
HHCCCHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH
PMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GDGLASLA
CCCHHHCC
>Mature Secondary Structure
MVSTLSPQATQLPNICGQEQEISEIVNHHEKIFLDRSDLNLDQVKAGFACALHMHQPTIP
CCCCCCCCHHHCCHHCCCHHHHHHHHHHHHHEEEECCCCCHHHHHCCCEEEEEECCCCCC
AGTDGALICNLQHMMENPHDGDNHNATVFAWCYSRMGEFIPELVAAGCSPRIMLDYSGNL
CCCCCEEEEEHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH
LWGLRQMGREDVLDNLKKITTDARYQPYVEWLGTMWSHAVAPSTPIPDLKLQIQAWQHYF
HHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH
AEIFGVEALKRVKGFSPPEMHLPNHPDTLFEYIKALKECGYRWLLVQEHSVERLDGSGLH
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCC
HDDKYLPNRLVVKNSRGEEISITALIKTQGSDTKLVAQMQPYYEAKSRDRQELAGQSVPC
CCCCCCCCEEEEECCCCCEEEEEEEEEECCCCCEEEEHHCHHHHHHCCCHHHHCCCCCHH
LVSQIADGENGGVMMNEFPGGYLPAWHDIKNDGSVVGFNGTEYLELLEAKGITEADYPVC
HHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCHHH
QAVGQAKIWTRLEAENQGVTPETVNQAIAYLNEHDHQFHVDGASWTNDLSWVKGYENVLE
HHCCCHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH
PMNELSAKFHEKYDRLVAEDPSVTKTEAYQRSLLYLLLVETSCFRYWGQGTWTDYARKLY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GDGLASLA
CCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA