| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077502
Identifier: 170077502
GI number: 170077502
Start: 909145
End: 909975
Strand: Reverse
Name: 170077502
Synonym: SYNPCC7002_A0880
Alternate gene names: NA
Gene position: 909975-909145 (Counterclockwise)
Preceding gene: 170077503
Following gene: 170077501
Centisome position: 30.25
GC content: 49.22
Gene sequence:
>831_bases ATGGCTAAATCCGCCGATATTGGCAGTAAACGTCTCATTAGTCTTAATCCCGATGCCTGGGTGCAGTGGGTCATGGGGGA TCAAACGCTCCAGGCCCAGGAATTTATCGATCCCCAATTCCAGTGGGTCAGCCGGGATAGCGATGTGCTGTTGCGCGTGA CCTGTCCCCAAGATGGCGATTTTCTGCTGCTCAACGAATTGCAGTTGCGTTATACCGCCCAGATGCCCCGGCGGATGACG GCCTATGCAGCCTTAGCGCGGGAAAAATTCAACTTGCCCGTTTACCCAGTGCTAATCAATATTCTGCCCCCGGCAAGCAA ACCCCAGATTCCGACTTCCTACCAAGCGGTGTTTAAAGGGTTGCAAACGAGGCAGGACTATCAGGTGATTAATCTTTGGG AGGTGGAAGCTAATTTGGTTTTGGCCCAATCCCTAACCTCATTGTTGCCCTTTGTTCCGATTCTTGCCGGGGGGAATGAT GAAAGCTTAATTCGAGAGGCGGTTCACCAACTCCGTCAAGAAGAACGACTCGATGAATTGGAGCCGCTGTTAGCCTTTTT TGCTAGCTTTGTATTGGAACTGCCCCTTGTGCAACAAATTATGAGGTGGGATATGACTGTACTTCGGGAATCGCCTTGGT ATAACGAAATTCTTAGTCGAGGTCAGCGTCGAGGTCAGCGAGAAAAAGAAATTTCAGTTGTACTTCGTCTTTTACAAAGG AATTTTTCGGTGGAGGAAATTGCCGAGATTGTCGATGATTCTGTTGAAGCGGTGACCAAAATCATTCAGGATCATCAAGG GCGATCGCCACAAGAGGGCACCCAAGATTAA
Upstream 100 bases:
>100_bases CCTGTTATATGCCCGGTGTACTGCTCTCGATTCGTAAAGTGACCGAGTTGAATACCCTTGTTTACGGCTTAGAAAATATC CTGTAGTTCTTGCCAAAATT
Downstream 100 bases:
>100_bases CCAATGCTCATTCCCATTACCCAAGAGAAATTTGAACAACTGATTCCCCTGGTCGCCAGCGCCGAGCAATACCAATACTA CTGGGGGAAAACCGAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAKSADIGSKRLISLNPDAWVQWVMGDQTLQAQEFIDPQFQWVSRDSDVLLRVTCPQDGDFLLLNELQLRYTAQMPRRMT AYAALAREKFNLPVYPVLINILPPASKPQIPTSYQAVFKGLQTRQDYQVINLWEVEANLVLAQSLTSLLPFVPILAGGND ESLIREAVHQLRQEERLDELEPLLAFFASFVLELPLVQQIMRWDMTVLRESPWYNEILSRGQRRGQREKEISVVLRLLQR NFSVEEIAEIVDDSVEAVTKIIQDHQGRSPQEGTQD
Sequences:
>Translated_276_residues MAKSADIGSKRLISLNPDAWVQWVMGDQTLQAQEFIDPQFQWVSRDSDVLLRVTCPQDGDFLLLNELQLRYTAQMPRRMT AYAALAREKFNLPVYPVLINILPPASKPQIPTSYQAVFKGLQTRQDYQVINLWEVEANLVLAQSLTSLLPFVPILAGGND ESLIREAVHQLRQEERLDELEPLLAFFASFVLELPLVQQIMRWDMTVLRESPWYNEILSRGQRRGQREKEISVVLRLLQR NFSVEEIAEIVDDSVEAVTKIIQDHQGRSPQEGTQD >Mature_275_residues AKSADIGSKRLISLNPDAWVQWVMGDQTLQAQEFIDPQFQWVSRDSDVLLRVTCPQDGDFLLLNELQLRYTAQMPRRMTA YAALAREKFNLPVYPVLINILPPASKPQIPTSYQAVFKGLQTRQDYQVINLWEVEANLVLAQSLTSLLPFVPILAGGNDE SLIREAVHQLRQEERLDELEPLLAFFASFVLELPLVQQIMRWDMTVLRESPWYNEILSRGQRRGQREKEISVVLRLLQRN FSVEEIAEIVDDSVEAVTKIIQDHQGRSPQEGTQD
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31715; Mature: 31584
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSADIGSKRLISLNPDAWVQWVMGDQTLQAQEFIDPQFQWVSRDSDVLLRVTCPQDGD CCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCC FLLLNELQLRYTAQMPRRMTAYAALAREKFNLPVYPVLINILPPASKPQIPTSYQAVFKG EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH LQTRQDYQVINLWEVEANLVLAQSLTSLLPFVPILAGGNDESLIREAVHQLRQEERLDEL HHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EPLLAFFASFVLELPLVQQIMRWDMTVLRESPWYNEILSRGQRRGQREKEISVVLRLLQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH NFSVEEIAEIVDDSVEAVTKIIQDHQGRSPQEGTQD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AKSADIGSKRLISLNPDAWVQWVMGDQTLQAQEFIDPQFQWVSRDSDVLLRVTCPQDGD CCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCC FLLLNELQLRYTAQMPRRMTAYAALAREKFNLPVYPVLINILPPASKPQIPTSYQAVFKG EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH LQTRQDYQVINLWEVEANLVLAQSLTSLLPFVPILAGGNDESLIREAVHQLRQEERLDEL HHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EPLLAFFASFVLELPLVQQIMRWDMTVLRESPWYNEILSRGQRRGQREKEISVVLRLLQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH NFSVEEIAEIVDDSVEAVTKIIQDHQGRSPQEGTQD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA