Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077501

Identifier: 170077501

GI number: 170077501

Start: 908425

End: 909141

Strand: Reverse

Name: 170077501

Synonym: SYNPCC7002_A0879

Alternate gene names: NA

Gene position: 909141-908425 (Counterclockwise)

Preceding gene: 170077502

Following gene: 170077499

Centisome position: 30.22

GC content: 48.68

Gene sequence:

>717_bases
ATGCTCATTCCCATTACCCAAGAGAAATTTGAACAACTGATTCCCCTGGTCGCCAGCGCCGAGCAATACCAATACTACTG
GGGGAAAACCGAAGATTTTTTACGACGCGCCCTAATCTCCTTTATTTTGGTGGTCTTGTTTTATTTACTGGGCCTCTTGC
TGCGAGAAACCGATTCCCTGCGGCTCTTGACCCAAATCATTGGTGGTTTGTATTGGTTTTGGTCGCCCATTTACTCAGCC
AGTCTGAAAAATGCGGAATATCGGCGGCAAGCCTACTGTTTTTTTTGGCGGGGCAAGATTCTCGATGTTTACCTCACCGA
AGAAATTGTCCGTACCCAGGAAGAAGTCGATAAACTTGGTCGTTTGTTGCGGGTCGAAAATCGAGAACGCCGCATTAACT
TAGAAGTCGGTGACAAAGAAGGCTATTTGGCCCGCATTCAAGCCCCAGTCGCCCCCATCCATCGCAACCTCAAACCAGGC
CAAGCCGTTGAACTGTTGGTGTTATCGAATCAGCGCAATCTCGGCCCCAAACTAAAGGTGACGGATGCCTATGTACCTCG
ACTTAATCTTTGGGTAGGGCTATATCCCTATTTGCGGCGAGATGTGTTTTGGGATGTGCGGGAACAACTGCGGGTACGCT
ATAGCAAAAATCCCAATAATCCTCCCCCAAGACCCTATCCAAAACGGCGATCGCCCCGACTGATGCGTAATTTTTAA

Upstream 100 bases:

>100_bases
GGAAATTGCCGAGATTGTCGATGATTCTGTTGAAGCGGTGACCAAAATCATTCAGGATCATCAAGGGCGATCGCCACAAG
AGGGCACCCAAGATTAACCA

Downstream 100 bases:

>100_bases
ACGACTCAAGAAAGCTCTTGGTACAGATTGTGGGTCTGGATATATTCAGTAACAGCGGGAATAACTGTCTTTTGTTTGCC
TTCACTGCGATATTCACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLIPITQEKFEQLIPLVASAEQYQYYWGKTEDFLRRALISFILVVLFYLLGLLLRETDSLRLLTQIIGGLYWFWSPIYSA
SLKNAEYRRQAYCFFWRGKILDVYLTEEIVRTQEEVDKLGRLLRVENRERRINLEVGDKEGYLARIQAPVAPIHRNLKPG
QAVELLVLSNQRNLGPKLKVTDAYVPRLNLWVGLYPYLRRDVFWDVREQLRVRYSKNPNNPPPRPYPKRRSPRLMRNF

Sequences:

>Translated_238_residues
MLIPITQEKFEQLIPLVASAEQYQYYWGKTEDFLRRALISFILVVLFYLLGLLLRETDSLRLLTQIIGGLYWFWSPIYSA
SLKNAEYRRQAYCFFWRGKILDVYLTEEIVRTQEEVDKLGRLLRVENRERRINLEVGDKEGYLARIQAPVAPIHRNLKPG
QAVELLVLSNQRNLGPKLKVTDAYVPRLNLWVGLYPYLRRDVFWDVREQLRVRYSKNPNNPPPRPYPKRRSPRLMRNF
>Mature_238_residues
MLIPITQEKFEQLIPLVASAEQYQYYWGKTEDFLRRALISFILVVLFYLLGLLLRETDSLRLLTQIIGGLYWFWSPIYSA
SLKNAEYRRQAYCFFWRGKILDVYLTEEIVRTQEEVDKLGRLLRVENRERRINLEVGDKEGYLARIQAPVAPIHRNLKPG
QAVELLVLSNQRNLGPKLKVTDAYVPRLNLWVGLYPYLRRDVFWDVREQLRVRYSKNPNNPPPRPYPKRRSPRLMRNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28374; Mature: 28374

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIPITQEKFEQLIPLVASAEQYQYYWGKTEDFLRRALISFILVVLFYLLGLLLRETDSL
CCCCCCHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RLLTQIIGGLYWFWSPIYSASLKNAEYRRQAYCFFWRGKILDVYLTEEIVRTQEEVDKLG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCEEEHHHHHHHHHHHHHHHHHH
RLLRVENRERRINLEVGDKEGYLARIQAPVAPIHRNLKPGQAVELLVLSNQRNLGPKLKV
HHHHCCCCCEEEEEEECCCCCCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCCCCEEEE
TDAYVPRLNLWVGLYPYLRRDVFWDVREQLRVRYSKNPNNPPPRPYPKRRSPRLMRNF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MLIPITQEKFEQLIPLVASAEQYQYYWGKTEDFLRRALISFILVVLFYLLGLLLRETDSL
CCCCCCHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RLLTQIIGGLYWFWSPIYSASLKNAEYRRQAYCFFWRGKILDVYLTEEIVRTQEEVDKLG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCEEEHHHHHHHHHHHHHHHHHH
RLLRVENRERRINLEVGDKEGYLARIQAPVAPIHRNLKPGQAVELLVLSNQRNLGPKLKV
HHHHCCCCCEEEEEEECCCCCCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCCCCEEEE
TDAYVPRLNLWVGLYPYLRRDVFWDVREQLRVRYSKNPNNPPPRPYPKRRSPRLMRNF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA