Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
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Accession | NC_010475 |
Length | 3,008,047 |
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The map label for this gene is 170077462
Identifier: 170077462
GI number: 170077462
Start: 866577
End: 866984
Strand: Reverse
Name: 170077462
Synonym: SYNPCC7002_A0840
Alternate gene names: NA
Gene position: 866984-866577 (Counterclockwise)
Preceding gene: 170077463
Following gene: 170077461
Centisome position: 28.82
GC content: 38.48
Gene sequence:
>408_bases ATGTTCTCAAGACTTGAGTTTATAGTGGATGGACCACCTGTATCACAACAGACCCGTAGACGTGAGCGTCTTAGAGATTG GAAAAGAGTGGTACGACAAGAGGCAGAGAAATATTGGTCATCTGGACAAAAAGCAACTACTGGTCTAATCATGCTACAAA TAACCTATTTCTATGATTCTGTTGCTATCGATGTAGATAATATTGTTAAGCCGATTCAGGATGCCATAATCGGATTAGTT TATATTGACGATGATCAAGTCACTGATGTTCTTGTCAGGAAACGAGATTTATCAGGTAACTTTAAGGTAGAACATATGAC CTTAACATTGGCGGAAGGTTTTTCTCGTGGAAATGAATTTTTGCATATTGTCGTAAATGAGGCTCCTGATCAAGAGGTAC TTACATGA
Upstream 100 bases:
>100_bases ACCTGACTTCTAAAGGAAGTCAAGATCTAGTCGCTTATTATATTGTGTTACTCACAGACATATAGGAGTATAAAATAACT AACCCTTTCTAGTTGAAGGC
Downstream 100 bases:
>100_bases TGACAACCCAAACAGCCAATCTAGAAAGAGAGCGATTACTACAGCTAGCTGAAGAATATCGTGAAAAGGGATATGAAATT TCTTTTGAGCCTAACCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MFSRLEFIVDGPPVSQQTRRRERLRDWKRVVRQEAEKYWSSGQKATTGLIMLQITYFYDSVAIDVDNIVKPIQDAIIGLV YIDDDQVTDVLVRKRDLSGNFKVEHMTLTLAEGFSRGNEFLHIVVNEAPDQEVLT
Sequences:
>Translated_135_residues MFSRLEFIVDGPPVSQQTRRRERLRDWKRVVRQEAEKYWSSGQKATTGLIMLQITYFYDSVAIDVDNIVKPIQDAIIGLV YIDDDQVTDVLVRKRDLSGNFKVEHMTLTLAEGFSRGNEFLHIVVNEAPDQEVLT >Mature_135_residues MFSRLEFIVDGPPVSQQTRRRERLRDWKRVVRQEAEKYWSSGQKATTGLIMLQITYFYDSVAIDVDNIVKPIQDAIIGLV YIDDDQVTDVLVRKRDLSGNFKVEHMTLTLAEGFSRGNEFLHIVVNEAPDQEVLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15602; Mature: 15602
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSRLEFIVDGPPVSQQTRRRERLRDWKRVVRQEAEKYWSSGQKATTGLIMLQITYFYDS CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEHHHH VAIDVDNIVKPIQDAIIGLVYIDDDQVTDVLVRKRDLSGNFKVEHMTLTLAEGFSRGNEF HEECHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEEEEHHHCCCCCEE LHIVVNEAPDQEVLT EEEEECCCCCCCCCC >Mature Secondary Structure MFSRLEFIVDGPPVSQQTRRRERLRDWKRVVRQEAEKYWSSGQKATTGLIMLQITYFYDS CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEHHHH VAIDVDNIVKPIQDAIIGLVYIDDDQVTDVLVRKRDLSGNFKVEHMTLTLAEGFSRGNEF HEECHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEEEEHHHCCCCCEE LHIVVNEAPDQEVLT EEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA