| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077444
Identifier: 170077444
GI number: 170077444
Start: 847765
End: 848196
Strand: Reverse
Name: 170077444
Synonym: SYNPCC7002_A0822
Alternate gene names: NA
Gene position: 848196-847765 (Counterclockwise)
Preceding gene: 170077448
Following gene: 170077443
Centisome position: 28.2
GC content: 53.01
Gene sequence:
>432_bases GTGAACGATCCTTTCTCTCGTAATATTCAATTCTCTTCTTCGGGCCTCGGCTGTTTTTTGACCTTTATTCTGATCGCGGC GTTACTGACTTCGGTGGGCCTCGGCTGGGTTGTCAACGGGTTTATTATTCTCATTCTGCTCATTCCCGTGGCGATCGCCT TGGGGGTTGTGGGCTTCCAGTGGTGGCTCAAGCGCAATTTGGTAGAGGCAGATTGTCCGGTCTGTGGCTATGAATTTACG GGTTTAAACAATTCCATGGCCCGCTGTCCTAGTTGCGGTGAAGTGGTGCAAATTACAGAAAAGAAATTCCAGCGCCAGAC CCCTGAGGGGACGGTGGAGGTGGCCGCCGTGGAAGTGGATGGGTCGCAAGGGACGGATAACGCCGACGCTAAAACGGTAG ATGTGCAGGTGCTAGAGCCGGGCGAAGATTAA
Upstream 100 bases:
>100_bases TTATTAAAATAATTTTTGTGCATTTGTAAGCTTATCATCTCGGTTTGTGAAATAAACTTGAGGCACTATCGTAAGCAGTT AACAATTATTAAGAAACATT
Downstream 100 bases:
>100_bases ACAGAACAGGTTATGATCTCTTGGGTATTGGCTTGATTTTCTTTGAGTATGTCCCATCCGCTAACCCGTTTATTCCGCTA TGGTAGTCGCTACCGCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNDPFSRNIQFSSSGLGCFLTFILIAALLTSVGLGWVVNGFIILILLIPVAIALGVVGFQWWLKRNLVEADCPVCGYEFT GLNNSMARCPSCGEVVQITEKKFQRQTPEGTVEVAAVEVDGSQGTDNADAKTVDVQVLEPGED
Sequences:
>Translated_143_residues MNDPFSRNIQFSSSGLGCFLTFILIAALLTSVGLGWVVNGFIILILLIPVAIALGVVGFQWWLKRNLVEADCPVCGYEFT GLNNSMARCPSCGEVVQITEKKFQRQTPEGTVEVAAVEVDGSQGTDNADAKTVDVQVLEPGED >Mature_143_residues MNDPFSRNIQFSSSGLGCFLTFILIAALLTSVGLGWVVNGFIILILLIPVAIALGVVGFQWWLKRNLVEADCPVCGYEFT GLNNSMARCPSCGEVVQITEKKFQRQTPEGTVEVAAVEVDGSQGTDNADAKTVDVQVLEPGED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15382; Mature: 15382
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPFSRNIQFSSSGLGCFLTFILIAALLTSVGLGWVVNGFIILILLIPVAIALGVVGFQ CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WWLKRNLVEADCPVCGYEFTGLNNSMARCPSCGEVVQITEKKFQRQTPEGTVEVAAVEVD HHHHHCCCCCCCCCCCEEECCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEC GSQGTDNADAKTVDVQVLEPGED CCCCCCCCCCEEEEEEEECCCCC >Mature Secondary Structure MNDPFSRNIQFSSSGLGCFLTFILIAALLTSVGLGWVVNGFIILILLIPVAIALGVVGFQ CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WWLKRNLVEADCPVCGYEFTGLNNSMARCPSCGEVVQITEKKFQRQTPEGTVEVAAVEVD HHHHHCCCCCCCCCCCEEECCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEC GSQGTDNADAKTVDVQVLEPGED CCCCCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA