| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077381
Identifier: 170077381
GI number: 170077381
Start: 788380
End: 789510
Strand: Reverse
Name: 170077381
Synonym: SYNPCC7002_A0758
Alternate gene names: NA
Gene position: 789510-788380 (Counterclockwise)
Preceding gene: 170077382
Following gene: 170077374
Centisome position: 26.25
GC content: 55.17
Gene sequence:
>1131_bases ATGTCCGATGTTGCCCCGTTAAATCTCCAGGATCTGCAAGCGGATCTCCAAACTCAACTTGAAGCAGAATATTTCCCCAC AGACCCGATTCAGGTGCGTTGTCTCTTTAAGGAAGGTCTGTTGCTTGTCCTGGTGCAACATCAAGCTCCGGCCCCGGCAG AGCTCCCGCCCCTTTTCCGGCTGATCCGCGATCGCCTCCAGGGTGATCCCCGCGTCCAAGGGCATCAAACCCTCATTTAT TTGCGGATTACTGGGGCCAACGAACCCTATGCCTTCCACGCCCTCACCCAGTTTGAAGTTGAGCCGGTTTTCGATGGGCA GTCCCCAGAAAATGCGACGGATTTCCCTGAACAATCTGAATTTCCAGAAGATATTGACCTCGAAGCTACGGATGATCCTT TTCCGCTCGTGGGCAATGAGTTAGAAAAAGACTCGTTTGATAACGTCGCCCCAGAAGAAGAGTTTACAGGCCCTACCGGA GATTTTGAAGGCTTTACCACCGCCGATGGAGGGCTGGAAGAATTTACTGAATCCTCCCCCCGGAAAGGCGATCGCCCCGG CAAAAAAGGCCCCCTAATCCTTGGTGCGGGTTTGTTGTTCGTCCTTCTGGGGGCCGCAGGCTATGCCTTGAGTCGTCCCT GTGTGGTTGGTTCCTGTGCGCCCCTGACCACCGCCACACAACTGGCTGATCCGGCTCGATCACTGTTTGCTGCTGGCGAA AATCCCTCTGGCCAAGCGATTCTCCAGGCCCAGGCCAATTTAGAAGAGGCGATCGCCACCCTAGAAACCGTGCCCCGTTG GTCGCCTCGGTACGGAGAAGTGCAGACCCAACTCGCCGATTACCAGTCCCTCAATGGCAGTCTTGGCAATCTAATCACAG GCTTATCCCAGGGGGCAACGGCCGCCCAAATGGCTGAAACTCCCCCTGCTTCTGTGGCCCAGTGGCAGGAAATTATCGAG CAATGGCAAACGGCGATCGTCACCTTAGACGCGATTCCACCAGGGGATTTTTACTACGATTTTGCCCAGGCGAGACGGGC CAGTTACCAACAAAATTTAGAAGCTGTGGAACAACGGGTGCAACAACTCCAGGCCCAAGAATCCCCAACCCCGGCTGCAG CGAGCAATTAG
Upstream 100 bases:
>100_bases ATAAACTGAGCTTTGGCGATCGCCGGGGTCTTTTGACAAGACTTTTTTTTTGAGCTTTACTTACAATGACATTTCAAGTC CATAGGCTGTTCTTGCGGTT
Downstream 100 bases:
>100_bases CGATCGCCCTTTAAAAAGCTAAGGGGGCAAGGGTATCGATGAGCGGGGCCGCTTTGAGGGTTTTGCCAATGTGATGCTCA AGGTACTGCCGTAACAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSDVAPLNLQDLQADLQTQLEAEYFPTDPIQVRCLFKEGLLLVLVQHQAPAPAELPPLFRLIRDRLQGDPRVQGHQTLIY LRITGANEPYAFHALTQFEVEPVFDGQSPENATDFPEQSEFPEDIDLEATDDPFPLVGNELEKDSFDNVAPEEEFTGPTG DFEGFTTADGGLEEFTESSPRKGDRPGKKGPLILGAGLLFVLLGAAGYALSRPCVVGSCAPLTTATQLADPARSLFAAGE NPSGQAILQAQANLEEAIATLETVPRWSPRYGEVQTQLADYQSLNGSLGNLITGLSQGATAAQMAETPPASVAQWQEIIE QWQTAIVTLDAIPPGDFYYDFAQARRASYQQNLEAVEQRVQQLQAQESPTPAAASN
Sequences:
>Translated_376_residues MSDVAPLNLQDLQADLQTQLEAEYFPTDPIQVRCLFKEGLLLVLVQHQAPAPAELPPLFRLIRDRLQGDPRVQGHQTLIY LRITGANEPYAFHALTQFEVEPVFDGQSPENATDFPEQSEFPEDIDLEATDDPFPLVGNELEKDSFDNVAPEEEFTGPTG DFEGFTTADGGLEEFTESSPRKGDRPGKKGPLILGAGLLFVLLGAAGYALSRPCVVGSCAPLTTATQLADPARSLFAAGE NPSGQAILQAQANLEEAIATLETVPRWSPRYGEVQTQLADYQSLNGSLGNLITGLSQGATAAQMAETPPASVAQWQEIIE QWQTAIVTLDAIPPGDFYYDFAQARRASYQQNLEAVEQRVQQLQAQESPTPAAASN >Mature_375_residues SDVAPLNLQDLQADLQTQLEAEYFPTDPIQVRCLFKEGLLLVLVQHQAPAPAELPPLFRLIRDRLQGDPRVQGHQTLIYL RITGANEPYAFHALTQFEVEPVFDGQSPENATDFPEQSEFPEDIDLEATDDPFPLVGNELEKDSFDNVAPEEEFTGPTGD FEGFTTADGGLEEFTESSPRKGDRPGKKGPLILGAGLLFVLLGAAGYALSRPCVVGSCAPLTTATQLADPARSLFAAGEN PSGQAILQAQANLEEAIATLETVPRWSPRYGEVQTQLADYQSLNGSLGNLITGLSQGATAAQMAETPPASVAQWQEIIEQ WQTAIVTLDAIPPGDFYYDFAQARRASYQQNLEAVEQRVQQLQAQESPTPAAASN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40786; Mature: 40654
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVAPLNLQDLQADLQTQLEAEYFPTDPIQVRCLFKEGLLLVLVQHQAPAPAELPPLFR CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCHHHH LIRDRLQGDPRVQGHQTLIYLRITGANEPYAFHALTQFEVEPVFDGQSPENATDFPEQSE HHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC FPEDIDLEATDDPFPLVGNELEKDSFDNVAPEEEFTGPTGDFEGFTTADGGLEEFTESSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCC RKGDRPGKKGPLILGAGLLFVLLGAAGYALSRPCVVGSCAPLTTATQLADPARSLFAAGE CCCCCCCCCCCEEEHHHHHHHHHHHCCHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCC NPSGQAILQAQANLEEAIATLETVPRWSPRYGEVQTQLADYQSLNGSLGNLITGLSQGAT CCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCH AAQMAETPPASVAQWQEIIEQWQTAIVTLDAIPPGDFYYDFAQARRASYQQNLEAVEQRV HHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQLQAQESPTPAAASN HHHHHHCCCCCCCCCC >Mature Secondary Structure SDVAPLNLQDLQADLQTQLEAEYFPTDPIQVRCLFKEGLLLVLVQHQAPAPAELPPLFR CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCHHHH LIRDRLQGDPRVQGHQTLIYLRITGANEPYAFHALTQFEVEPVFDGQSPENATDFPEQSE HHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC FPEDIDLEATDDPFPLVGNELEKDSFDNVAPEEEFTGPTGDFEGFTTADGGLEEFTESSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCC RKGDRPGKKGPLILGAGLLFVLLGAAGYALSRPCVVGSCAPLTTATQLADPARSLFAAGE CCCCCCCCCCCEEEHHHHHHHHHHHCCHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCC NPSGQAILQAQANLEEAIATLETVPRWSPRYGEVQTQLADYQSLNGSLGNLITGLSQGAT CCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCH AAQMAETPPASVAQWQEIIEQWQTAIVTLDAIPPGDFYYDFAQARRASYQQNLEAVEQRV HHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQLQAQESPTPAAASN HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA