| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077374
Identifier: 170077374
GI number: 170077374
Start: 780405
End: 780707
Strand: Reverse
Name: 170077374
Synonym: SYNPCC7002_A0751
Alternate gene names: NA
Gene position: 780707-780405 (Counterclockwise)
Preceding gene: 170077381
Following gene: 170077368
Centisome position: 25.95
GC content: 46.53
Gene sequence:
>303_bases TTGGTAGAAAGATTTCTTTTAAAGGTACTTTGGTTAGATAAAGACGTGGCGATCGCCGTGGATCAAGTTGTTGGGAAAGG CACCAGTCCTTTGACCGCCTATTTCTTTTGGCCCCGTAACGACGCTTGGCAACAATTAAAAGACGAACTAGAAGCGAAGC ACTGGATTTCTGAGGCAGAGCGCATCGAAGTGCTCAACCAAGCCACAGAAGTTATCAACTACTGGCAAGAACATGGCAAA AAGACCAGTATGGCTGAAGCCCAGGCAAAATTCCCTGAAGTGGCCTTTAGCGGCAGTAACTAA
Upstream 100 bases:
>100_bases GGAGATTTTCTAGGGGGCATCCAAATCTCCCGCTTCAATGTAAAATAATAGACTGTAAATTTTTGAAACCACTTGTGTAA ATTTGGGTTTGGAGGCTTCT
Downstream 100 bases:
>100_bases AGTCAATTGCCACTGTGCTTGTCTTAAATGTAATCACTATCTAAGTTTTTACGATTGTTATTTTGTAATTAATTTCTATA AAAAAATGGGCAGCTCTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Ycf65-like protein [H]
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MVERFLLKVLWLDKDVAIAVDQVVGKGTSPLTAYFFWPRNDAWQQLKDELEAKHWISEAERIEVLNQATEVINYWQEHGK KTSMAEAQAKFPEVAFSGSN
Sequences:
>Translated_100_residues MVERFLLKVLWLDKDVAIAVDQVVGKGTSPLTAYFFWPRNDAWQQLKDELEAKHWISEAERIEVLNQATEVINYWQEHGK KTSMAEAQAKFPEVAFSGSN >Mature_100_residues MVERFLLKVLWLDKDVAIAVDQVVGKGTSPLTAYFFWPRNDAWQQLKDELEAKHWISEAERIEVLNQATEVINYWQEHGK KTSMAEAQAKFPEVAFSGSN
Specific function: Probably a ribosomal protein or a ribosome-associated protein [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PSRP3/ycf65 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006924 - ProDom: PD015453 [H]
Pfam domain/function: PF04839 PSRP-3_Ycf65 [H]
EC number: NA
Molecular weight: Translated: 11525; Mature: 11525
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERFLLKVLWLDKDVAIAVDQVVGKGTSPLTAYFFWPRNDAWQQLKDELEAKHWISEAE CHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH RIEVLNQATEVINYWQEHGKKTSMAEAQAKFPEVAFSGSN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEECCCC >Mature Secondary Structure MVERFLLKVLWLDKDVAIAVDQVVGKGTSPLTAYFFWPRNDAWQQLKDELEAKHWISEAE CHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH RIEVLNQATEVINYWQEHGKKTSMAEAQAKFPEVAFSGSN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA