| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077367
Identifier: 170077367
GI number: 170077367
Start: 773338
End: 774426
Strand: Reverse
Name: 170077367
Synonym: SYNPCC7002_A0744
Alternate gene names: NA
Gene position: 774426-773338 (Counterclockwise)
Preceding gene: 170077368
Following gene: 170077366
Centisome position: 25.75
GC content: 51.88
Gene sequence:
>1089_bases GTGACCAATTCAACCCAACATATCGTCGTTGCTTCTACCGAACCCTACAGTGGGAAATCTGCTGTGCTACTTGGGTTGGT ACAGAGCCTTAAGCAAAAAGGCATCTCTGTGGCCTACAGTAAGCCCATCGGTACAGTTTGGCATGACGAGCAGAATGGGC GTTTCACCCGCATCGAAGATGATCTCCGGTTCCTTGGGGAAGCCTTTGGTCTTAAGGAAACGGAAGTGCGATCGCCGGTA CTTTTTCTGGATGAGGCAACGGTGGCCCAGCGACTCACGGGTCAAGACCAAACCGATTATCCTCAAAAATTAAAGGATGA TCTAGGGGCGATCGCCAGTGACATCACCTTTATCGAAGCCCCCAAAAGTCTCTGGGAAGGGAGTTTATTTAACCTCTCTG CCGGGGAAATTGCGGCGACCCTAGGGGCCAAAATCCTCTTGGTCATCCCCTACCACCACAAGCTTTTAGTTGATAGTTTG TTGACAATTTATCGGTTCCTGGGCGATCGCCTCATGGGAGTGGTGATTAACAAAATTCCCCCCGAAGCCCTCGAAACCGC CGAGACACAAATTAAGCCCTTCTTGGCCCAGCGGGGTATTGATGTCTATGGCCTTGTCCCCGCCGACCGGATCCTCCGGA GTGTAACAGTGCGGGAATTGGTGAAGCGCCTCAATGCGGAAGTTCTTTGTCGGGCTAATCGCCTAGATCTGATGGTCGAA AGTCTCACCATTGGCGCGATGAACGTTAACTCTGCCTTGAAATATTTCCGGCAACGACAAAATATGGCGGTGGTCACTGG GGGCGATCGCACTGATCTGCAACTGGCAGCCCTAGAAACCTCCACCCAATGTCTGATCCTGACAGGCCATGTCGCCCCCC AAGAAATTATTCTCAACCGCGCCGAAGACCTAGAAATCCCAATTCTGTCGGTGGACTATGACACCCTGACCACCGTCGAA ATCATCGACCAAGCCTTTAACCATGTGCGCCTCCAGGAGCCGATTAAAGTAGAAGTGGCCCAGACCCTATTCCAAAAGCA TTTTGACTTCGAGCGTTTCTTAGCCCAGATGCCCTTTCCCGTTGCCTAG
Upstream 100 bases:
>100_bases CTTCTGGGCCTAAAAAAAGAATAGCGTCCTGGTTTGCTCAGTCGCGAAATTCCGTTATTGTGGAGGCTAAAGAATGTGAG CTTCTAAAGGAGTAGTGGGT
Downstream 100 bases:
>100_bases AACCTTTGCCAACGCTTATGCTTAGATCCTAGATACCAGCGACTTTTTGTAATTTCCTATCCTCAAGTTCCATGCAAGCT GTAGAGCGTCCTGTGCAAAC
Product: DRTGG domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTNSTQHIVVASTEPYSGKSAVLLGLVQSLKQKGISVAYSKPIGTVWHDEQNGRFTRIEDDLRFLGEAFGLKETEVRSPV LFLDEATVAQRLTGQDQTDYPQKLKDDLGAIASDITFIEAPKSLWEGSLFNLSAGEIAATLGAKILLVIPYHHKLLVDSL LTIYRFLGDRLMGVVINKIPPEALETAETQIKPFLAQRGIDVYGLVPADRILRSVTVRELVKRLNAEVLCRANRLDLMVE SLTIGAMNVNSALKYFRQRQNMAVVTGGDRTDLQLAALETSTQCLILTGHVAPQEIILNRAEDLEIPILSVDYDTLTTVE IIDQAFNHVRLQEPIKVEVAQTLFQKHFDFERFLAQMPFPVA
Sequences:
>Translated_362_residues MTNSTQHIVVASTEPYSGKSAVLLGLVQSLKQKGISVAYSKPIGTVWHDEQNGRFTRIEDDLRFLGEAFGLKETEVRSPV LFLDEATVAQRLTGQDQTDYPQKLKDDLGAIASDITFIEAPKSLWEGSLFNLSAGEIAATLGAKILLVIPYHHKLLVDSL LTIYRFLGDRLMGVVINKIPPEALETAETQIKPFLAQRGIDVYGLVPADRILRSVTVRELVKRLNAEVLCRANRLDLMVE SLTIGAMNVNSALKYFRQRQNMAVVTGGDRTDLQLAALETSTQCLILTGHVAPQEIILNRAEDLEIPILSVDYDTLTTVE IIDQAFNHVRLQEPIKVEVAQTLFQKHFDFERFLAQMPFPVA >Mature_361_residues TNSTQHIVVASTEPYSGKSAVLLGLVQSLKQKGISVAYSKPIGTVWHDEQNGRFTRIEDDLRFLGEAFGLKETEVRSPVL FLDEATVAQRLTGQDQTDYPQKLKDDLGAIASDITFIEAPKSLWEGSLFNLSAGEIAATLGAKILLVIPYHHKLLVDSLL TIYRFLGDRLMGVVINKIPPEALETAETQIKPFLAQRGIDVYGLVPADRILRSVTVRELVKRLNAEVLCRANRLDLMVES LTIGAMNVNSALKYFRQRQNMAVVTGGDRTDLQLAALETSTQCLILTGHVAPQEIILNRAEDLEIPILSVDYDTLTTVEI IDQAFNHVRLQEPIKVEVAQTLFQKHFDFERFLAQMPFPVA
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF1212 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 40312; Mature: 40181
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSTQHIVVASTEPYSGKSAVLLGLVQSLKQKGISVAYSKPIGTVWHDEQNGRFTRIED CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCEEEEHH DLRFLGEAFGLKETEVRSPVLFLDEATVAQRLTGQDQTDYPQKLKDDLGAIASDITFIEA HHHHHHHHHCCCHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEC PKSLWEGSLFNLSAGEIAATLGAKILLVIPYHHKLLVDSLLTIYRFLGDRLMGVVINKIP CHHHHCCCCEECCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEALETAETQIKPFLAQRGIDVYGLVPADRILRSVTVRELVKRLNAEVLCRANRLDLMVE HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHH SLTIGAMNVNSALKYFRQRQNMAVVTGGDRTDLQLAALETSTQCLILTGHVAPQEIILNR HHEEEEECHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCHHHHHHCC AEDLEIPILSVDYDTLTTVEIIDQAFNHVRLQEPIKVEVAQTLFQKHFDFERFLAQMPFP CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC VA CC >Mature Secondary Structure TNSTQHIVVASTEPYSGKSAVLLGLVQSLKQKGISVAYSKPIGTVWHDEQNGRFTRIED CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCEEEEHH DLRFLGEAFGLKETEVRSPVLFLDEATVAQRLTGQDQTDYPQKLKDDLGAIASDITFIEA HHHHHHHHHCCCHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEC PKSLWEGSLFNLSAGEIAATLGAKILLVIPYHHKLLVDSLLTIYRFLGDRLMGVVINKIP CHHHHCCCCEECCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEALETAETQIKPFLAQRGIDVYGLVPADRILRSVTVRELVKRLNAEVLCRANRLDLMVE HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCHHEEEECHHHHHHHH SLTIGAMNVNSALKYFRQRQNMAVVTGGDRTDLQLAALETSTQCLILTGHVAPQEIILNR HHEEEEECHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCHHHHHHCC AEDLEIPILSVDYDTLTTVEIIDQAFNHVRLQEPIKVEVAQTLFQKHFDFERFLAQMPFP CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC VA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]