| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is trpE [H]
Identifier: 170077304
GI number: 170077304
Start: 709762
End: 711282
Strand: Reverse
Name: trpE [H]
Synonym: SYNPCC7002_A0681
Alternate gene names: 170077304
Gene position: 711282-709762 (Counterclockwise)
Preceding gene: 170077305
Following gene: 170077297
Centisome position: 23.65
GC content: 52.01
Gene sequence:
>1521_bases ATGATTTTTCCTGATTTCGAGCAGTTTCGGCATCTCAGTCAACAGGGTAATTTTATTCCGGTCTATCAGGAGTGGGTGGC GGATCTCGAAACGCCAGTGTCGGCTTGGTACAAGGTTTGTGCAGATCAACCCTACAATTTTCTGTTGGAGTCCGTTGAGG GGGGCGAAAATATTGGTCGCTATAGTTTCCTCGGTTGCGATCCGGTTTGGGTCTTAGAAAATAAAGGCGATCGCACCACG CAAAAATTCCGTGATGGGGCTGTCCAAGAATTTAGCGGCAATCCCTTTGATGTGTTGGCCCAATGTCTCGCCAGCATTAA GCCTGTCCAACTGTCGGAATTACCACCGGGGATTGGTGGTCTATTTGGGATGTGGGGCTATGAGTTGATGCGCTGGATCG AACCACGGGTGCCGGTGTACGAACGCCAAGAAGAGGATCTACCCGATGGCCTCTGGATGCAAATTGATAGCTTGATCATT TTTGACCAAGTTAAACGCAAGATTTGGGTCATCACCTATGCTGACCTGCGGGATCCGGCGGTGCCCCTAGAAGAAGCCTA CCTAAATGCCTGCGATCGCGTGACGAAATTAGTCCTCAAGCTCAAGTTGCCTTTGCCTGTTGCCGCCAAACCCTTAGAAT GGCTCGCCAACCCAGACGGGGAAGCCCTCAAGTACGAAAGCAACACTTCCCAAGCACAGTTTTGCCAGAACGTCGCCAAG GCAAAGGAATACATTAAGGCCGGAGATATTTTTCAGGTGGTGCTTTCCCAGCGGCTCCAGACGAGCTACGAAGGCCATCC CTTTGATCTCTACCGTTCCCTGCGCCTGATTAACCCTTCTCCCTACATGTCTTTTTACAATTTTGGGGATTGGCAACTCA TCGGCTCTAGCCCAGAGATTATGGTCAAAGCCGAGCAAACGCCAGACGGAAAACTCCAGGCGATGCTCCGACCGATTGCG GGCACGCGACGCCGGGGGAAAACCCAAGCTGAGGATTTAGCGTTAGAAAAAGACCTCTTGGCCGACCCTAAGGAAATCGC TGAACACGTGATGCTTGTGGATTTGGGCCGCAATGACCTCGGTCGCGTCTGCGAAAAAGGCACGGTCACAGTTGGGGATT TGATGATCATCGAACGTTATTCTCACGTGATGCACATCGTGAGTAATGTGATGGGAGATTTAGCCCCCGACCAATCGGCT TGGAATTTATTACAGGCTTGTTTTCCCGCCGGAACAGTCAGCGGTGCGCCGAAAATTCGCGCTTTAGAAATTATCAACGA ACTGGAACCCGAACGACGTGGCCCCTACTCTGGCGTCTACGGTTACTACGATTTTGAAGGCCAACTGAATACGGCGATTA CGATCCGGAGCATGATTGTGCGATCGCAGGGGAATCAGCACCAGGTCTTTGTCCAGGCGGGCGCGGGCATCGTCGCAGAC TCCGAGCCGGAACGGGAATACCAAGAAACCCTTGATAAGGCCAGGGGGATGTTGGAAGCGATTCGCTGCCTTCAGGTTTA A
Upstream 100 bases:
>100_bases TGAACAAAAGGCTTCCGCTTCTTTGTGTCTAGCTCTATTTTTACTTTTATCTACCGTCCCAGCGGCCCTCCATGTGCCCC AGGCGACCGACGCATTTCCT
Downstream 100 bases:
>100_bases TGACGTCTGGGGACAGGGAATTTTAAAACATCGTTGAATCCAGGATTACAGCATCTCCCACTGAAATCTTGCCGGAGCTT GTGGGCATGAGGTTAATGCC
Product: anthranilate synthetase alpha-subunit
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MIFPDFEQFRHLSQQGNFIPVYQEWVADLETPVSAWYKVCADQPYNFLLESVEGGENIGRYSFLGCDPVWVLENKGDRTT QKFRDGAVQEFSGNPFDVLAQCLASIKPVQLSELPPGIGGLFGMWGYELMRWIEPRVPVYERQEEDLPDGLWMQIDSLII FDQVKRKIWVITYADLRDPAVPLEEAYLNACDRVTKLVLKLKLPLPVAAKPLEWLANPDGEALKYESNTSQAQFCQNVAK AKEYIKAGDIFQVVLSQRLQTSYEGHPFDLYRSLRLINPSPYMSFYNFGDWQLIGSSPEIMVKAEQTPDGKLQAMLRPIA GTRRRGKTQAEDLALEKDLLADPKEIAEHVMLVDLGRNDLGRVCEKGTVTVGDLMIIERYSHVMHIVSNVMGDLAPDQSA WNLLQACFPAGTVSGAPKIRALEIINELEPERRGPYSGVYGYYDFEGQLNTAITIRSMIVRSQGNQHQVFVQAGAGIVAD SEPEREYQETLDKARGMLEAIRCLQV
Sequences:
>Translated_506_residues MIFPDFEQFRHLSQQGNFIPVYQEWVADLETPVSAWYKVCADQPYNFLLESVEGGENIGRYSFLGCDPVWVLENKGDRTT QKFRDGAVQEFSGNPFDVLAQCLASIKPVQLSELPPGIGGLFGMWGYELMRWIEPRVPVYERQEEDLPDGLWMQIDSLII FDQVKRKIWVITYADLRDPAVPLEEAYLNACDRVTKLVLKLKLPLPVAAKPLEWLANPDGEALKYESNTSQAQFCQNVAK AKEYIKAGDIFQVVLSQRLQTSYEGHPFDLYRSLRLINPSPYMSFYNFGDWQLIGSSPEIMVKAEQTPDGKLQAMLRPIA GTRRRGKTQAEDLALEKDLLADPKEIAEHVMLVDLGRNDLGRVCEKGTVTVGDLMIIERYSHVMHIVSNVMGDLAPDQSA WNLLQACFPAGTVSGAPKIRALEIINELEPERRGPYSGVYGYYDFEGQLNTAITIRSMIVRSQGNQHQVFVQAGAGIVAD SEPEREYQETLDKARGMLEAIRCLQV >Mature_506_residues MIFPDFEQFRHLSQQGNFIPVYQEWVADLETPVSAWYKVCADQPYNFLLESVEGGENIGRYSFLGCDPVWVLENKGDRTT QKFRDGAVQEFSGNPFDVLAQCLASIKPVQLSELPPGIGGLFGMWGYELMRWIEPRVPVYERQEEDLPDGLWMQIDSLII FDQVKRKIWVITYADLRDPAVPLEEAYLNACDRVTKLVLKLKLPLPVAAKPLEWLANPDGEALKYESNTSQAQFCQNVAK AKEYIKAGDIFQVVLSQRLQTSYEGHPFDLYRSLRLINPSPYMSFYNFGDWQLIGSSPEIMVKAEQTPDGKLQAMLRPIA GTRRRGKTQAEDLALEKDLLADPKEIAEHVMLVDLGRNDLGRVCEKGTVTVGDLMIIERYSHVMHIVSNVMGDLAPDQSA WNLLQACFPAGTVSGAPKIRALEIINELEPERRGPYSGVYGYYDFEGQLNTAITIRSMIVRSQGNQHQVFVQAGAGIVAD SEPEREYQETLDKARGMLEAIRCLQV
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=391, Percent_Identity=38.8746803069054, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1788114, Length=468, Percent_Identity=30.5555555555556, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI1786809, Length=271, Percent_Identity=29.1512915129151, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082077, Length=271, Percent_Identity=27.6752767527675, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320935, Length=506, Percent_Identity=35.9683794466403, Blast_Score=307, Evalue=3e-84, Organism=Saccharomyces cerevisiae, GI6324361, Length=409, Percent_Identity=24.9388753056235, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 57154; Mature: 57154
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFPDFEQFRHLSQQGNFIPVYQEWVADLETPVSAWYKVCADQPYNFLLESVEGGENIGR CCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCC YSFLGCDPVWVLENKGDRTTQKFRDGAVQEFSGNPFDVLAQCLASIKPVQLSELPPGIGG EEEECCCEEEEEECCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCHHCCCCCHHH LFGMWGYELMRWIEPRVPVYERQEEDLPDGLWMQIDSLIIFDQVKRKIWVITYADLRDPA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCC VPLEEAYLNACDRVTKLVLKLKLPLPVAAKPLEWLANPDGEALKYESNTSQAQFCQNVAK CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHH AKEYIKAGDIFQVVLSQRLQTSYEGHPFDLYRSLRLINPSPYMSFYNFGDWQLIGSSPEI HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHEECCCEEEECCCCCE MVKAEQTPDGKLQAMLRPIAGTRRRGKTQAEDLALEKDLLADPKEIAEHVMLVDLGRNDL EEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHEEEEECCCCHH GRVCEKGTVTVGDLMIIERYSHVMHIVSNVMGDLAPDQSAWNLLQACFPAGTVSGAPKIR HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHH ALEIINELEPERRGPYSGVYGYYDFEGQLNTAITIRSMIVRSQGNQHQVFVQAGAGIVAD HHHHHHHHCHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEECC SEPEREYQETLDKARGMLEAIRCLQV CCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIFPDFEQFRHLSQQGNFIPVYQEWVADLETPVSAWYKVCADQPYNFLLESVEGGENIGR CCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCC YSFLGCDPVWVLENKGDRTTQKFRDGAVQEFSGNPFDVLAQCLASIKPVQLSELPPGIGG EEEECCCEEEEEECCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHCCCCCHHCCCCCHHH LFGMWGYELMRWIEPRVPVYERQEEDLPDGLWMQIDSLIIFDQVKRKIWVITYADLRDPA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCC VPLEEAYLNACDRVTKLVLKLKLPLPVAAKPLEWLANPDGEALKYESNTSQAQFCQNVAK CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCCCHHHHHHHHHH AKEYIKAGDIFQVVLSQRLQTSYEGHPFDLYRSLRLINPSPYMSFYNFGDWQLIGSSPEI HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHEECCCEEEECCCCCE MVKAEQTPDGKLQAMLRPIAGTRRRGKTQAEDLALEKDLLADPKEIAEHVMLVDLGRNDL EEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHEEEEECCCCHH GRVCEKGTVTVGDLMIIERYSHVMHIVSNVMGDLAPDQSAWNLLQACFPAGTVSGAPKIR HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHH ALEIINELEPERRGPYSGVYGYYDFEGQLNTAITIRSMIVRSQGNQHQVFVQAGAGIVAD HHHHHHHHCHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEECC SEPEREYQETLDKARGMLEAIRCLQV CCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231; 3141423 [H]