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The map label for this gene is argF [H]

Identifier: 170077297

GI number: 170077297

Start: 703097

End: 704017

Strand: Reverse

Name: argF [H]

Synonym: SYNPCC7002_A0674

Alternate gene names: 170077297

Gene position: 704017-703097 (Counterclockwise)

Preceding gene: 170077304

Following gene: 170077295

Centisome position: 23.4

GC content: 53.64

Gene sequence:

>921_bases
ATGAATGCACTCAAGGGTCGGGATCTTCTGAGCATTGCAGATCTCAGCAGCACAGAAATTATTACCCTGCTAAACCTGGC
GGCAGATCTCAAACAGGGAAAAATCGCCCCCACCTGCCCCAAAACCCTCGGCCTGTTGTTCTACAAAGCCTCTACCCGCA
CCAGAGTCTCCTTTAGCGTGGCTATGTATCAACTGGGTGGCAATGTCATTGACCTGAACCCAAACCGCACCCAAGTGGGT
CGCGGCGAGCCCATCGAGGACACCGCCAGGGTTTTAGACCGCTACCTCGATATTTTGGCGATTCGTACCTTTGATCAACA
GGATCTCGAAACCTTCGCTGATTACTGTGAAATGCCGATTATCAACGCCCTTACAGATTTAGAACACCCCTGTCAGATGT
TGGCGGATCTGCAAACGATGCAGGAAACCTTCGGCCAACTGGAAGGCCTGACCATGACCTATGTGGGTGATGGCAATAAT
GTCGCCCACTCGATCCTCCTCGGTGGCGCGTTAGTCGGCATGAATATTCGCATCGCTACCCCCAAAGATTACGAACCTAG
CCCGAAAATTGTCGCCCAGGCCCAGGCCATTGCAGGCGATCGCAGTCAAATTTTAATTACCCATGATCCCAAGGAAGCCG
CCGAAGGCTGTCACGCCATCTACACCGATGTGTGGGCCAGTATGGGCCAAGAAGACCTCGCCAACAGTCGGGTACCCATT
TTCCAACCCTACCAAGTCAACGCCGAACTCATGGCCCTCGCCGATAAAGAGGCGATCGCCCTCCACTGTTTGCCCGCCCA
TCGAGGCGAAGAAATTACTGCCGACGTGATGGAAGGCCCCCAAGCCAAAATTTGGGATCAAGCCGAAAACCGGATGCACG
CCCAAAAAGCGCTGATGGCCAGTCTCCTTGGCATTGTCTAA

Upstream 100 bases:

>100_bases
TCCTGACGAAGACCAGTGGCGATCGCCCTTGCAAGCTTTTGTGGAATCTGGAGGGGAGCTTATAATGATTTTTTTGCCAC
GGTAAGGAGCCGAAAACAGG

Downstream 100 bases:

>100_bases
CTTTAATTATGGATCTAGCGGAGGGTGATTTGTAGCTGGAGATTACTCATGCCCCACATCGCAAAAAATTTCCGCGATAG
CTCTAGGCTGGCTTCGGTCA

Product: ornithine carbamoyltransferase

Products: NA

Alternate protein names: OTCase [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNALKGRDLLSIADLSSTEIITLLNLAADLKQGKIAPTCPKTLGLLFYKASTRTRVSFSVAMYQLGGNVIDLNPNRTQVG
RGEPIEDTARVLDRYLDILAIRTFDQQDLETFADYCEMPIINALTDLEHPCQMLADLQTMQETFGQLEGLTMTYVGDGNN
VAHSILLGGALVGMNIRIATPKDYEPSPKIVAQAQAIAGDRSQILITHDPKEAAEGCHAIYTDVWASMGQEDLANSRVPI
FQPYQVNAELMALADKEAIALHCLPAHRGEEITADVMEGPQAKIWDQAENRMHAQKALMASLLGIV

Sequences:

>Translated_306_residues
MNALKGRDLLSIADLSSTEIITLLNLAADLKQGKIAPTCPKTLGLLFYKASTRTRVSFSVAMYQLGGNVIDLNPNRTQVG
RGEPIEDTARVLDRYLDILAIRTFDQQDLETFADYCEMPIINALTDLEHPCQMLADLQTMQETFGQLEGLTMTYVGDGNN
VAHSILLGGALVGMNIRIATPKDYEPSPKIVAQAQAIAGDRSQILITHDPKEAAEGCHAIYTDVWASMGQEDLANSRVPI
FQPYQVNAELMALADKEAIALHCLPAHRGEEITADVMEGPQAKIWDQAENRMHAQKALMASLLGIV
>Mature_306_residues
MNALKGRDLLSIADLSSTEIITLLNLAADLKQGKIAPTCPKTLGLLFYKASTRTRVSFSVAMYQLGGNVIDLNPNRTQVG
RGEPIEDTARVLDRYLDILAIRTFDQQDLETFADYCEMPIINALTDLEHPCQMLADLQTMQETFGQLEGLTMTYVGDGNN
VAHSILLGGALVGMNIRIATPKDYEPSPKIVAQAQAIAGDRSQILITHDPKEAAEGCHAIYTDVWASMGQEDLANSRVPI
FQPYQVNAELMALADKEAIALHCLPAHRGEEITADVMEGPQAKIWDQAENRMHAQKALMASLLGIV

Specific function: Arginine biosynthesis; sixth step. [C]

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

Organism=Homo sapiens, GI38788445, Length=307, Percent_Identity=41.6938110749186, Blast_Score=237, Evalue=8e-63,
Organism=Homo sapiens, GI18105007, Length=314, Percent_Identity=27.0700636942675, Blast_Score=118, Evalue=6e-27,
Organism=Escherichia coli, GI1786469, Length=333, Percent_Identity=38.7387387387387, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1790703, Length=332, Percent_Identity=38.2530120481928, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI2367364, Length=327, Percent_Identity=29.9694189602446, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI48994908, Length=363, Percent_Identity=25.068870523416, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193204318, Length=328, Percent_Identity=27.7439024390244, Blast_Score=90, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322373, Length=309, Percent_Identity=31.3915857605178, Blast_Score=158, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6322331, Length=317, Percent_Identity=28.0757097791798, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24642586, Length=319, Percent_Identity=29.153605015674, Blast_Score=116, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002292 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: =2.1.3.3 [H]

Molecular weight: Translated: 33463; Mature: 33463

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00097 CARBAMOYLTRANSFERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALKGRDLLSIADLSSTEIITLLNLAADLKQGKIAPTCPKTLGLLFYKASTRTRVSFSV
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEECCCCEEEEHEE
AMYQLGGNVIDLNPNRTQVGRGEPIEDTARVLDRYLDILAIRTFDQQDLETFADYCEMPI
EEEHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
INALTDLEHPCQMLADLQTMQETFGQLEGLTMTYVGDGNNVAHSILLGGALVGMNIRIAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCEEEECEEEEEC
PKDYEPSPKIVAQAQAIAGDRSQILITHDPKEAAEGCHAIYTDVWASMGQEDLANSRVPI
CCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCE
FQPYQVNAELMALADKEAIALHCLPAHRGEEITADVMEGPQAKIWDQAENRMHAQKALMA
ECCCCCCHHHEEECCCCEEEEEEECCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHH
SLLGIV
HHHHCC
>Mature Secondary Structure
MNALKGRDLLSIADLSSTEIITLLNLAADLKQGKIAPTCPKTLGLLFYKASTRTRVSFSV
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHEEEECCCCEEEEHEE
AMYQLGGNVIDLNPNRTQVGRGEPIEDTARVLDRYLDILAIRTFDQQDLETFADYCEMPI
EEEHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
INALTDLEHPCQMLADLQTMQETFGQLEGLTMTYVGDGNNVAHSILLGGALVGMNIRIAT
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCEEEECEEEEEC
PKDYEPSPKIVAQAQAIAGDRSQILITHDPKEAAEGCHAIYTDVWASMGQEDLANSRVPI
CCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCE
FQPYQVNAELMALADKEAIALHCLPAHRGEEITADVMEGPQAKIWDQAENRMHAQKALMA
ECCCCCCHHHEEECCCCEEEEEEECCCCCCCEEHHHHCCCCCHHHHHHHHHHHHHHHHHH
SLLGIV
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]