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The map label for this gene is 170026440

Identifier: 170026440

GI number: 170026440

Start: 4675524

End: 4676195

Strand: Direct

Name: 170026440

Synonym: YPK_4236

Alternate gene names: NA

Gene position: 4675524-4676195 (Clockwise)

Preceding gene: 170026439

Following gene: 170026441

Centisome position: 99.7

GC content: 41.37

Gene sequence:

>672_bases
ATGAGCTTTTACATACGCAAGAACATGGTGCTTAGTCTCTTGTGGGGCCTGTGGGTTGCGGCTTTAGTGGCCTATGCTAT
CTACGATTTGTTTTTCTATCTTTTTATCGTTCCTGCATTATTCCTCATCTTTACAGTGAGTAATGTTATGTTCAAAAAGA
AAGTAAATAGTAATAATGACGGTTCTTCTAGCGTAAATATCCCTAGCCAAACGAGTATGCCATTATCTAATGCTTCACAG
GAAAATGCTAAAAACAATACTATTATTGCCGCAGGTACACAGTTGAAAGGCAATATTAATCTGGATGGTGATATTCAGAT
TTATGGTGTGGTGATGGGGGATATCATCGTCAATGAAGGTTCAATCAGATTAATGCGTAGTGGGCAGATTGAGGGAAATT
TAACTGCCCCCCATATTACGGTTGATGGCAGGGTTGAAGGGGTTTGTATTTCTGATGATCTGGAAATTCTGGAACATGGT
CGCTTAAAAGGTATCGTGAAGGGCAGTAATTTCTCAATCAAAAAGGGCGGTATTTTTGTTGGTCAGTCGGAAATTACGGA
AGAACCGGTTAGCCAAGTCAAGAGTAAAGCCAAGCCAGTTATCGCCATAAGTCAGGATAAAGCTAAAGCAGAGGACGTCG
CTGCCGGCCAGCACAGCAGTAACGTTTCTTGA

Upstream 100 bases:

>100_bases
CTCATATAGGAAAATATAATTCCGGAATATTTTTCAGAGACTGTGTTATTTGTTAAAAATAATGATTAATGTTTTTTCAA
GCAGGACGGGATAGAAAGTA

Downstream 100 bases:

>100_bases
TATGAAAATTCAGAAATATATGTTCCTTAAACAAGAGTGAACCGCCTAAGTTACTGCTTTATTGTCGCTCTACGGCCTTG
TCTCACTTTCCCAATGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSFYIRKNMVLSLLWGLWVAALVAYAIYDLFFYLFIVPALFLIFTVSNVMFKKKVNSNNDGSSSVNIPSQTSMPLSNASQ
ENAKNNTIIAAGTQLKGNINLDGDIQIYGVVMGDIIVNEGSIRLMRSGQIEGNLTAPHITVDGRVEGVCISDDLEILEHG
RLKGIVKGSNFSIKKGGIFVGQSEITEEPVSQVKSKAKPVIAISQDKAKAEDVAAGQHSSNVS

Sequences:

>Translated_223_residues
MSFYIRKNMVLSLLWGLWVAALVAYAIYDLFFYLFIVPALFLIFTVSNVMFKKKVNSNNDGSSSVNIPSQTSMPLSNASQ
ENAKNNTIIAAGTQLKGNINLDGDIQIYGVVMGDIIVNEGSIRLMRSGQIEGNLTAPHITVDGRVEGVCISDDLEILEHG
RLKGIVKGSNFSIKKGGIFVGQSEITEEPVSQVKSKAKPVIAISQDKAKAEDVAAGQHSSNVS
>Mature_222_residues
SFYIRKNMVLSLLWGLWVAALVAYAIYDLFFYLFIVPALFLIFTVSNVMFKKKVNSNNDGSSSVNIPSQTSMPLSNASQE
NAKNNTIIAAGTQLKGNINLDGDIQIYGVVMGDIIVNEGSIRLMRSGQIEGNLTAPHITVDGRVEGVCISDDLEILEHGR
LKGIVKGSNFSIKKGGIFVGQSEITEEPVSQVKSKAKPVIAISQDKAKAEDVAAGQHSSNVS

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24080; Mature: 23949

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFYIRKNMVLSLLWGLWVAALVAYAIYDLFFYLFIVPALFLIFTVSNVMFKKKVNSNND
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSSSVNIPSQTSMPLSNASQENAKNNTIIAAGTQLKGNINLDGDIQIYGVVMGDIIVNEG
CCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCEEEEEEEEEEEEECCC
SIRLMRSGQIEGNLTAPHITVDGRVEGVCISDDLEILEHGRLKGIVKGSNFSIKKGGIFV
CEEEEECCCCCCCCCCCEEEECCEEEEEEECCCHHHHHCCCEEEEEECCCEEEECCCEEE
GQSEITEEPVSQVKSKAKPVIAISQDKAKAEDVAAGQHSSNVS
CHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFYIRKNMVLSLLWGLWVAALVAYAIYDLFFYLFIVPALFLIFTVSNVMFKKKVNSNND
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSSSVNIPSQTSMPLSNASQENAKNNTIIAAGTQLKGNINLDGDIQIYGVVMGDIIVNEG
CCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCEEEEEEEEEEEEECCC
SIRLMRSGQIEGNLTAPHITVDGRVEGVCISDDLEILEHGRLKGIVKGSNFSIKKGGIFV
CEEEEECCCCCCCCCCCEEEECCEEEEEEECCCHHHHHCCCEEEEEECCCEEEECCCEEE
GQSEITEEPVSQVKSKAKPVIAISQDKAKAEDVAAGQHSSNVS
CHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA