Click here to switch to the map view.

The map label for this gene is phoU [H]

Identifier: 170026439

GI number: 170026439

Start: 4674512

End: 4675228

Strand: Direct

Name: phoU [H]

Synonym: YPK_4235

Alternate gene names: 170026439

Gene position: 4674512-4675228 (Clockwise)

Preceding gene: 170026438

Following gene: 170026440

Centisome position: 99.68

GC content: 43.93

Gene sequence:

>717_bases
ATGGATAATCTAAATAAACATATTTCCGGCCAGTTCAATGCAGAACTTGAACATATCCGCACCCAAGTTTTAACTATGGG
GGGGTTGGTGGAACAACAATTATCTGATGCGATCACCGCCATGCATAATCAAGATGGCGAGCTGGCAAAGCGGGTAATTG
ATGGGGATGAAAAGGTCAATATGATGGAAGTGGCCATTGATGAAGCCTGTGTGCGCATCATTGCCAAACGTCAGCCAACA
GCCAGTGATCTACGGTTAGTCATGGCTATCATTAAGACCATTTCCGAATTAGAGCGTATTGGTGATGTGGCAGATAAAAT
CTGCCGCACAGCATTGGAAAAATTCTCTCATCAACATCAACCGCTATTGGTCAGCCTAGAGTCTTTGGGGCGTCATACGG
TGCAAATGCTACATGATGTCTTGGATGCATTCGCTCGGATGGATCTGGATGAAGCTATCCGGATTTATCGTGAAGACAGA
AAGGTCGATCAAGAATATGAAGGCATTGTACGTCAATTGATGACATATATGATGGAAGATCCGCGAACTATCCCAAGTGT
GTTAACTGCGTTGTTTTGTGCTCGTTCCATTGAACGTATTGGTGACCGCTGTCAGAATATTTGCGAGTTTATCTTCTACT
TTGTTAAAGGGCATGACTTCCGCCACCTTGGTGGTGATGACTTAGAGAAGTTACTCTCTGGTAAGCCTGAAAAATAA

Upstream 100 bases:

>100_bases
TCGCTATGGTTGATGGCCTTATTACTGGGCTACTGCACATAGGCAACTACATTCATTACGCCTACTGCCTTTGGGATAGG
CCATACGTACGGGAAGTATC

Downstream 100 bases:

>100_bases
TATTTAACCCCGGTCAGCCTACTCGTTTGACCGGTTTTTTTATCCACTCCTTGTTATTAATAACCATAATCCCCCCGCTA
TTAATTATTATATATTTACT

Product: transcriptional regulator PhoU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDNLNKHISGQFNAELEHIRTQVLTMGGLVEQQLSDAITAMHNQDGELAKRVIDGDEKVNMMEVAIDEACVRIIAKRQPT
ASDLRLVMAIIKTISELERIGDVADKICRTALEKFSHQHQPLLVSLESLGRHTVQMLHDVLDAFARMDLDEAIRIYREDR
KVDQEYEGIVRQLMTYMMEDPRTIPSVLTALFCARSIERIGDRCQNICEFIFYFVKGHDFRHLGGDDLEKLLSGKPEK

Sequences:

>Translated_238_residues
MDNLNKHISGQFNAELEHIRTQVLTMGGLVEQQLSDAITAMHNQDGELAKRVIDGDEKVNMMEVAIDEACVRIIAKRQPT
ASDLRLVMAIIKTISELERIGDVADKICRTALEKFSHQHQPLLVSLESLGRHTVQMLHDVLDAFARMDLDEAIRIYREDR
KVDQEYEGIVRQLMTYMMEDPRTIPSVLTALFCARSIERIGDRCQNICEFIFYFVKGHDFRHLGGDDLEKLLSGKPEK
>Mature_238_residues
MDNLNKHISGQFNAELEHIRTQVLTMGGLVEQQLSDAITAMHNQDGELAKRVIDGDEKVNMMEVAIDEACVRIIAKRQPT
ASDLRLVMAIIKTISELERIGDVADKICRTALEKFSHQHQPLLVSLESLGRHTVQMLHDVLDAFARMDLDEAIRIYREDR
KVDQEYEGIVRQLMTYMMEDPRTIPSVLTALFCARSIERIGDRCQNICEFIFYFVKGHDFRHLGGDDLEKLLSGKPEK

Specific function: Probably involved in phosphate transport and/or metabolism [H]

COG id: COG0704

COG function: function code P; Phosphate uptake regulator

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoU family [H]

Homologues:

Organism=Escherichia coli, GI1790161, Length=233, Percent_Identity=90.1287553648069, Blast_Score=443, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008170 [H]

Pfam domain/function: PF01895 PhoU [H]

EC number: NA

Molecular weight: Translated: 27210; Mature: 27210

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLNKHISGQFNAELEHIRTQVLTMGGLVEQQLSDAITAMHNQDGELAKRVIDGDEKVN
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH
MMEVAIDEACVRIIAKRQPTASDLRLVMAIIKTISELERIGDVADKICRTALEKFSHQHQ
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLLVSLESLGRHTVQMLHDVLDAFARMDLDEAIRIYREDRKVDQEYEGIVRQLMTYMMED
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRTIPSVLTALFCARSIERIGDRCQNICEFIFYFVKGHDFRHLGGDDLEKLLSGKPEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MDNLNKHISGQFNAELEHIRTQVLTMGGLVEQQLSDAITAMHNQDGELAKRVIDGDEKVN
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH
MMEVAIDEACVRIIAKRQPTASDLRLVMAIIKTISELERIGDVADKICRTALEKFSHQHQ
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLLVSLESLGRHTVQMLHDVLDAFARMDLDEAIRIYREDRKVDQEYEGIVRQLMTYMMED
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRTIPSVLTALFCARSIERIGDRCQNICEFIFYFVKGHDFRHLGGDDLEKLLSGKPEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2993631; 3881386; 7686882; 9278503; 3034860; 3536855; 8226621 [H]