| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026378
Identifier: 170026378
GI number: 170026378
Start: 4598536
End: 4598907
Strand: Reverse
Name: 170026378
Synonym: YPK_4171
Alternate gene names: NA
Gene position: 4598907-4598536 (Counterclockwise)
Preceding gene: 170026379
Following gene: 170026367
Centisome position: 98.07
GC content: 50.54
Gene sequence:
>372_bases ATGAGAATGACCAGTCGTAAAAAAGAAATATTGAGTTTCTACGAACCGGACAACCTCGAATGGGTAACGGGTGAGATTGG CCCGCCTCCTCTCGATGTGTCGGGTGTGACCTATTTGATTAATGGCATGGCGTCATTCGATAAGCGCCACCAGCTCGAAT CAACTCGGCGAACGCTGGAATCAATGGTTAAAGCGGGCCTGCTGGAAAAGATAACCAGCTATGAGCAAAGGCAGGATACT ACACAGTCAGGTGGTGGGAATGGCGTGTGGTGTAACGTTTCGCGTTATGCCTTGCCTGGCTCTTGTGTGATTATGCGTGA TGATGGAGGCAAGCGTGAGGCAATCGACGGGGAAGTGGTGCGGATTGATTAG
Upstream 100 bases:
>100_bases GCTGGTGGGCTACTGGCAGTCAATCCTCTCCAGTTTGAATGTCGCTATATTGGTTCTTATTGTAGGATAGATATATCCCA CATTAAGGAATTATCCCGCC
Downstream 100 bases:
>100_bases ATGTTGCCTTTGGTGGCTACCTACGAGGTGCTGGCTTCGTCCACTGGTAAGCTGGCGCACTTATCCTCTGGCGGTGACGT TCTTTAGCTGCCAATGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRMTSRKKEILSFYEPDNLEWVTGEIGPPPLDVSGVTYLINGMASFDKRHQLESTRRTLESMVKAGLLEKITSYEQRQDT TQSGGGNGVWCNVSRYALPGSCVIMRDDGGKREAIDGEVVRID
Sequences:
>Translated_123_residues MRMTSRKKEILSFYEPDNLEWVTGEIGPPPLDVSGVTYLINGMASFDKRHQLESTRRTLESMVKAGLLEKITSYEQRQDT TQSGGGNGVWCNVSRYALPGSCVIMRDDGGKREAIDGEVVRID >Mature_123_residues MRMTSRKKEILSFYEPDNLEWVTGEIGPPPLDVSGVTYLINGMASFDKRHQLESTRRTLESMVKAGLLEKITSYEQRQDT TQSGGGNGVWCNVSRYALPGSCVIMRDDGGKREAIDGEVVRID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13743; Mature: 13743
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTSRKKEILSFYEPDNLEWVTGEIGPPPLDVSGVTYLINGMASFDKRHQLESTRRTLE CCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SMVKAGLLEKITSYEQRQDTTQSGGGNGVWCNVSRYALPGSCVIMRDDGGKREAIDGEVV HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCEEEEECCCCCCCCCCCEEE RID EEC >Mature Secondary Structure MRMTSRKKEILSFYEPDNLEWVTGEIGPPPLDVSGVTYLINGMASFDKRHQLESTRRTLE CCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SMVKAGLLEKITSYEQRQDTTQSGGGNGVWCNVSRYALPGSCVIMRDDGGKREAIDGEVV HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEECCCCEEEEECCCCCCCCCCCEEE RID EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA