| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is kdtX [H]
Identifier: 170026357
GI number: 170026357
Start: 4583588
End: 4584370
Strand: Direct
Name: kdtX [H]
Synonym: YPK_4150
Alternate gene names: 170026357
Gene position: 4583588-4584370 (Clockwise)
Preceding gene: 170026356
Following gene: 170026358
Centisome position: 97.74
GC content: 46.74
Gene sequence:
>783_bases ATGGGTACCAAAAAACGTCTGTCGGTGGTGATGATAACCAAGAATGAAGCCTCTCTGCTGACGGACTGTTTAGCATCCGT GGCCTGGGCTGATGAAATAATCGTATTAGACTCAGGCAGTGAAGATGAAACACGGGCATTAGCTCAGCAATTCGGGGCAA AAGTTTACAGCAACATCAATTGGCCCGGTTACGGTAAACAGCGGCAACTCGCTCAACAATATGCCAGCGGCGACTATATT TTGATGTTAGATGCTGATGAGCGGGTGACCCCAGAGCTTAAAATCGCGATTGAATCTGTTCTGCTAGCACCAGAAGAGGG TGCGGTTTATAGCTGTTCACGCCGGAACCTCTTTTTAGGGCGTTTTATGCGCCACAGCGGCTGGTATCCAGATAGGGTGA CTCGGTTATATCCTCATCACCAATATCGCTACAACGATAATTTAGTCCATGAATCACTCGATAGCGGCTCAGCAAAAGTT ATCCCACTGGCTGGTGATTTATTGCATCTGACTTGCCGCGACTTTTTTGCCTTTCAACGTAAACAGCTTAGTTATGCCGA AGCATGGGCCATCCAACGTCATCAGCAAGGCAAAAGTTGCAGTTATTTTGCCATTCTCAGCCATACTCTTGGGGCATTCA GTAAAACGTGGTTATTACGTGCTGGCTTCCTTGATGGTAAGCAAGGGCTATTACTGGCGGTAGTCAACGCGCAATATACT TTTAATAAATATGCCGCTCTGTGGGCATTGAGCCACCAGTATCAGAAAAGCGAGAAATCATGA
Upstream 100 bases:
>100_bases CTATGGCCGCCACGCGGTTGATGTCTTACATGAAAATCAGGGCGCATTACAACGGTTATTACATTTGTTGGAGCCTTATC TGCCACAACGGAGCCACTAA
Downstream 100 bases:
>100_bases TCACCAAAGCCATCTATCCGGGGACATTTGATCCCATTACTAATGGGCATTTGGATTTAGTGACGCGCGCATCCGCGATG TTCAGTCATGTGATCTTGGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGTKKRLSVVMITKNEASLLTDCLASVAWADEIIVLDSGSEDETRALAQQFGAKVYSNINWPGYGKQRQLAQQYASGDYI LMLDADERVTPELKIAIESVLLAPEEGAVYSCSRRNLFLGRFMRHSGWYPDRVTRLYPHHQYRYNDNLVHESLDSGSAKV IPLAGDLLHLTCRDFFAFQRKQLSYAEAWAIQRHQQGKSCSYFAILSHTLGAFSKTWLLRAGFLDGKQGLLLAVVNAQYT FNKYAALWALSHQYQKSEKS
Sequences:
>Translated_260_residues MGTKKRLSVVMITKNEASLLTDCLASVAWADEIIVLDSGSEDETRALAQQFGAKVYSNINWPGYGKQRQLAQQYASGDYI LMLDADERVTPELKIAIESVLLAPEEGAVYSCSRRNLFLGRFMRHSGWYPDRVTRLYPHHQYRYNDNLVHESLDSGSAKV IPLAGDLLHLTCRDFFAFQRKQLSYAEAWAIQRHQQGKSCSYFAILSHTLGAFSKTWLLRAGFLDGKQGLLLAVVNAQYT FNKYAALWALSHQYQKSEKS >Mature_259_residues GTKKRLSVVMITKNEASLLTDCLASVAWADEIIVLDSGSEDETRALAQQFGAKVYSNINWPGYGKQRQLAQQYASGDYIL MLDADERVTPELKIAIESVLLAPEEGAVYSCSRRNLFLGRFMRHSGWYPDRVTRLYPHHQYRYNDNLVHESLDSGSAKVI PLAGDLLHLTCRDFFAFQRKQLSYAEAWAIQRHQQGKSCSYFAILSHTLGAFSKTWLLRAGFLDGKQGLLLAVVNAQYTF NKYAALWALSHQYQKSEKS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 29455; Mature: 29324
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKKRLSVVMITKNEASLLTDCLASVAWADEIIVLDSGSEDETRALAQQFGAKVYSNIN CCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCC WPGYGKQRQLAQQYASGDYILMLDADERVTPELKIAIESVLLAPEEGAVYSCSRRNLFLG CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHEEHHHHCCCCCCCEEEECCCCHHHH RFMRHSGWYPDRVTRLYPHHQYRYNDNLVHESLDSGSAKVIPLAGDLLHLTCRDFFAFQR HHHHHCCCCCHHHHHHCCCCEEECCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHH KQLSYAEAWAIQRHQQGKSCSYFAILSHTLGAFSKTWLLRAGFLDGKQGLLLAVVNAQYT HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCC FNKYAALWALSHQYQKSEKS HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GTKKRLSVVMITKNEASLLTDCLASVAWADEIIVLDSGSEDETRALAQQFGAKVYSNIN CCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCC WPGYGKQRQLAQQYASGDYILMLDADERVTPELKIAIESVLLAPEEGAVYSCSRRNLFLG CCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHEEHHHHCCCCCCCEEEECCCCHHHH RFMRHSGWYPDRVTRLYPHHQYRYNDNLVHESLDSGSAKVIPLAGDLLHLTCRDFFAFQR HHHHHCCCCCHHHHHHCCCCEEECCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHH KQLSYAEAWAIQRHQQGKSCSYFAILSHTLGAFSKTWLLRAGFLDGKQGLLLAVVNAQYT HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCC FNKYAALWALSHQYQKSEKS HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8824620 [H]