Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
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Accession | NC_010465 |
Length | 4,689,441 |
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The map label for this gene is yiiQ [H]
Identifier: 170026324
GI number: 170026324
Start: 4551079
End: 4551714
Strand: Direct
Name: yiiQ [H]
Synonym: YPK_4117
Alternate gene names: 170026324
Gene position: 4551079-4551714 (Clockwise)
Preceding gene: 170026322
Following gene: 170026325
Centisome position: 97.05
GC content: 44.97
Gene sequence:
>636_bases ATGAGAAAAAAAATCGTCTCAATGCGGATAATATTGTTGCTGGCAGCATTGTTATTAATAACATTTATGTTGATAACAAC GATCAACCACGCTCATGCCGATCCTACCAATGACAGTAGCCCGCCAAAGGAAGGGGCTCCGCCAATTGCGCCCTACCTGC TTTTCAACGCTCCAACGTTTGATTTGACCTTGGTTAAATTCCGCGAAAGTTATAATCGCGCCAATCCAACGCTGCCAATC AACGAATTTCATGCCATCACGGTAAAAGAAGATTCACCGCCACTGACACGGGCTGCCAGTAAAATTAATGAAAATCTTTA TGCCTCAACCGCACTGGAGAAAGGCACAGGTAAGATAAAAACCTTACAAATTACCTACTTACCAATTAAAGGTAATGAAG AGAAAACCGCTAAACTGCTTGCAATCAACTACATGGCAGCCCTGATGCGTCAGTTTGAGCCGACATTGTCAGTAGCGCAA AGTCTCGCCAACGTGCAAAAGCTGCTGACAGAAGGCAAAGGCTCGCCTTTCTATGCCCATACTATTGGCGCAATCCGCTA TGTGGTGGCAGATAACGGAGAAAAAGGGCTTACCTTCGCAGTTGAACCGATTAAGCTGTCGCTATCTGAAGCATAA
Upstream 100 bases:
>100_bases CAAGGTCGCAACTAACCAATAATCTTTGCGGTGAATTTTGACAATGACTACTGATTACCGCTTTAATCCTCTCTATACAC TTCTAACGGCGGCCTAAGTC
Downstream 100 bases:
>100_bases TCTCACTGCAATTAATGACGAAAAGCAAAGCCATGACGACTAATCATCTCTATACTGTTGGACAGGTAAACTGCCTGTCA GGCAGTCATTATTATTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MRKKIVSMRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTFDLTLVKFRESYNRANPTLPI NEFHAITVKEDSPPLTRAASKINENLYASTALEKGTGKIKTLQITYLPIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQ SLANVQKLLTEGKGSPFYAHTIGAIRYVVADNGEKGLTFAVEPIKLSLSEA
Sequences:
>Translated_211_residues MRKKIVSMRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTFDLTLVKFRESYNRANPTLPI NEFHAITVKEDSPPLTRAASKINENLYASTALEKGTGKIKTLQITYLPIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQ SLANVQKLLTEGKGSPFYAHTIGAIRYVVADNGEKGLTFAVEPIKLSLSEA >Mature_211_residues MRKKIVSMRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTFDLTLVKFRESYNRANPTLPI NEFHAITVKEDSPPLTRAASKINENLYASTALEKGTGKIKTLQITYLPIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQ SLANVQKLLTEGKGSPFYAHTIGAIRYVVADNGEKGLTFAVEPIKLSLSEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790354, Length=195, Percent_Identity=55.8974358974359, Blast_Score=210, Evalue=7e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009918 [H]
Pfam domain/function: PF07305 DUF1454 [H]
EC number: NA
Molecular weight: Translated: 23135; Mature: 23135
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKIVSMRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCC DLTLVKFRESYNRANPTLPINEFHAITVKEDSPPLTRAASKINENLYASTALEKGTGKIK CHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE TLQITYLPIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQSLANVQKLLTEGKGSPFYAH EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHH TIGAIRYVVADNGEKGLTFAVEPIKLSLSEA HHHHEEEEEECCCCCCCEEEEEEEEEEECCC >Mature Secondary Structure MRKKIVSMRIILLLAALLLITFMLITTINHAHADPTNDSSPPKEGAPPIAPYLLFNAPTF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCC DLTLVKFRESYNRANPTLPINEFHAITVKEDSPPLTRAASKINENLYASTALEKGTGKIK CHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE TLQITYLPIKGNEEKTAKLLAINYMAALMRQFEPTLSVAQSLANVQKLLTEGKGSPFYAH EEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHH TIGAIRYVVADNGEKGLTFAVEPIKLSLSEA HHHHEEEEEECCCCCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]